RNA–Protein interactions for RNA: ENST00000575156.5

ERCC4-207, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 1 (best) BASIC

Gene ERCC4, Length 2,073 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-207ENST00000575156 PAM16Q9Y3D7 125 aa9.51□□□□□ -0.89
ERCC4-207ENST00000575156 CHTOPQ9Y3Y2 248 aaKnown RBP9.51□□□□□ -0.89
ERCC4-207ENST00000575156 DYNC2H1Q8NCM8 4307 aaKnown RBP9.5□□□□□ -0.89
ERCC4-207ENST00000575156 AMMECR1LQ6DCA0 310 aa9.5□□□□□ -0.89
ERCC4-207ENST00000575156 DGAT2L7PQ6IED9 249 aa9.5□□□□□ -0.89
ERCC4-207ENST00000575156 AMELXQ99217 191 aa9.5□□□□□ -0.89
ERCC4-207ENST00000575156 CSMD3Q7Z407 3707 aa9.5□□□□□ -0.89
ERCC4-207ENST00000575156 IGLV4-69A0A075B6H9 119 aa9.49□□□□□ -0.89
ERCC4-207ENST00000575156 SH2D6Q7Z4S9 175 aa9.49□□□□□ -0.89
ERCC4-207ENST00000575156 DNAH7Q8WXX0 4024 aa9.49□□□□□ -0.89
ERCC4-207ENST00000575156 TMEM262E9PQX1 116 aa9.49□□□□□ -0.89
ERCC4-207ENST00000575156 F8VRH5 84 aa9.49□□□□□ -0.89
ERCC4-207ENST00000575156 TCTAP57738 103 aa9.49□□□□□ -0.89
ERCC4-207ENST00000575156 MPV17L2Q567V2 206 aa9.49□□□□□ -0.89
ERCC4-207ENST00000575156 ZNF664Q8N3J9 261 aa9.49□□□□□ -0.89
ERCC4-207ENST00000575156 OR5A1Q8NGJ0 315 aa9.49□□□□□ -0.89
ERCC4-207ENST00000575156 VAMP8Q9BV40 100 aa9.49□□□□□ -0.89
ERCC4-207ENST00000575156 CDC42SE2Q9NRR3 84 aa9.49□□□□□ -0.89
ERCC4-207ENST00000575156 IGLL5B9A064 214 aa9.48□□□□□ -0.89
ERCC4-207ENST00000575156 H7C423 109 aa9.48□□□□□ -0.89
ERCC4-207ENST00000575156 DPM2O94777 84 aa9.48□□□□□ -0.89
ERCC4-207ENST00000575156 MRPS36P82909 103 aaKnown RBP9.48□□□□□ -0.89
ERCC4-207ENST00000575156 ESRGQ1W209 222 aa9.48□□□□□ -0.89
ERCC4-207ENST00000575156 LELP1Q5T871 98 aa9.48□□□□□ -0.89
ERCC4-207ENST00000575156 STPG4Q8N801 248 aa9.48□□□□□ -0.89
ERCC4-207ENST00000575156 CSDC2Q9Y534 153 aaKnown RBP9.48□□□□□ -0.89
ERCC4-207ENST00000575156 TRAV9-2A0A087WT02 112 aa9.47□□□□□ -0.89
ERCC4-207ENST00000575156 IGKCP01834 107 aa9.47□□□□□ -0.89
ERCC4-207ENST00000575156 S100A12P80511 92 aa9.47□□□□□ -0.89
ERCC4-207ENST00000575156 PLECQ15149 4684 aaKnown RBP9.47□□□□□ -0.89
ERCC4-207ENST00000575156 A0A0J9YXV3 536 aa9.47□□□□□ -0.89
ERCC4-207ENST00000575156 C11orf86A6NJI1 115 aa9.47□□□□□ -0.89
ERCC4-207ENST00000575156 RBX1P62877 108 aa9.47□□□□□ -0.89
ERCC4-207ENST00000575156 PRO1933Q9H354 126 aa9.47□□□□□ -0.89
ERCC4-207ENST00000575156 NPSP0C0P6 89 aa9.46□□□□□ -0.89
ERCC4-207ENST00000575156 PAPPA-AS1Q5QFB9 102 aa9.46□□□□□ -0.89
ERCC4-207ENST00000575156 TMEM101Q96IK0 257 aa9.46□□□□□ -0.89
ERCC4-207ENST00000575156 SPATA45Q537H7 98 aa9.46□□□□□ -0.9
ERCC4-207ENST00000575156 LYSTQ99698 3801 aa9.46□□□□□ -0.9
ERCC4-207ENST00000575156 STARD9Q9P2P6 4700 aa9.45□□□□□ -0.9
ERCC4-207ENST00000575156 ZNF25P17030 456 aaPredicted RBP9.45□□□□□ -0.9
ERCC4-207ENST00000575156 TGP01266 2768 aa9.45□□□□□ -0.9
ERCC4-207ENST00000575156 TRAV13-1A0A0B4J241 112 aa9.44□□□□□ -0.9
ERCC4-207ENST00000575156 PLNP26678 52 aa9.44□□□□□ -0.9
ERCC4-207ENST00000575156 TIRAPP58753 221 aa9.44□□□□□ -0.9
ERCC4-207ENST00000575156 ANKRD39Q53RE8 183 aa9.44□□□□□ -0.9
ERCC4-207ENST00000575156 WFDC10BQ8IUB3 73 aa9.44□□□□□ -0.9
ERCC4-207ENST00000575156 IGKV3OR2-268A0A0C4DH90 116 aa9.44□□□□□ -0.9
ERCC4-207ENST00000575156 UBE2D1P51668 147 aa9.44□□□□□ -0.9
ERCC4-207ENST00000575156 C15orf53Q8NAA6 179 aa9.44□□□□□ -0.9
ERCC4-207ENST00000575156 SMAGPQ0VAQ4 97 aa9.43□□□□□ -0.9
ERCC4-207ENST00000575156 CLPSL2Q6UWE3 100 aa9.43□□□□□ -0.9
ERCC4-207ENST00000575156 C2orf88Q9BSF0 95 aa9.43□□□□□ -0.9
ERCC4-207ENST00000575156 CHAC1Q9BUX1 264 aa9.43□□□□□ -0.9
ERCC4-207ENST00000575156 A0A1B0GUV1 79 aa9.43□□□□□ -0.9
ERCC4-207ENST00000575156 IGLC3P0DOY3 106 aa9.43□□□□□ -0.9
ERCC4-207ENST00000575156 TP73-AS1Q9UF72 201 aa9.43□□□□□ -0.9
ERCC4-207ENST00000575156 COX6A2Q02221 97 aa9.42□□□□□ -0.9
ERCC4-207ENST00000575156 NFE4Q86UQ8 179 aa9.42□□□□□ -0.9
ERCC4-207ENST00000575156 PCP4L1A6NKN8 68 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 HSBP1L1C9JCN9 74 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 TENM2Q9NT68 2774 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 IGKV2D-26A0A0A0MRZ7 120 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 TRAV8-6A0A0B4J262 113 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 IGHV3-30P01768 117 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 IGHV3-33P01772 117 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 IGHV3-30-3P0DP02 117 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 IGHV3-30-5P0DP03 117 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 ZNF22P17026 224 aaPredicted RBP9.41□□□□□ -0.9
ERCC4-207ENST00000575156 TMEM170BQ5T4T1 132 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 LINC00242Q5T6M2 205 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 LINC00269Q8N2A0 174 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 C14orf144Q96I85 54 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 LINC00588Q9Y4M8 146 aa9.41□□□□□ -0.9
ERCC4-207ENST00000575156 ANGP03950 147 aaKnown RBP9.4□□□□□ -0.9
ERCC4-207ENST00000575156 TINCRA0A1B0GVN0 87 aa9.39□□□□□ -0.91
ERCC4-207ENST00000575156 PKIAP61925 76 aa9.39□□□□□ -0.91
ERCC4-207ENST00000575156 TTTY13Q9BZ97 58 aa9.39□□□□□ -0.91
ERCC4-207ENST00000575156 DNAH1Q9P2D7 4330 aa9.39□□□□□ -0.91
ERCC4-207ENST00000575156 APLNQ9ULZ1 77 aa9.38□□□□□ -0.91
ERCC4-207ENST00000575156 LINC00959A0A1B0GUT2 108 aa9.38□□□□□ -0.91
ERCC4-207ENST00000575156 NMUP48645 174 aa9.38□□□□□ -0.91
ERCC4-207ENST00000575156 LINC00469Q8N7U9 141 aa9.38□□□□□ -0.91
ERCC4-207ENST00000575156 GEMIN7Q9H840 131 aaKnown RBP9.38□□□□□ -0.91
ERCC4-207ENST00000575156 CDKN2A-AS1Q9UH64 79 aa9.38□□□□□ -0.91
ERCC4-207ENST00000575156 KLK12Q9UKR0 248 aa9.38□□□□□ -0.91
ERCC4-207ENST00000575156 IGHV3-64A0A075B6Q5 118 aa9.37□□□□□ -0.91
ERCC4-207ENST00000575156 PCP2Q8IVA1 136 aa9.37□□□□□ -0.91
ERCC4-207ENST00000575156 ZFAND6Q6FIF0 208 aa9.36□□□□□ -0.91
ERCC4-207ENST00000575156 FAM19A3Q7Z5A8 133 aa9.36□□□□□ -0.91
ERCC4-207ENST00000575156 TMEM223A0PJW6 202 aa9.36□□□□□ -0.91
ERCC4-207ENST00000575156 TSTD3H0UI37 97 aa9.36□□□□□ -0.91
ERCC4-207ENST00000575156 CCL18P55774 89 aa9.36□□□□□ -0.91
ERCC4-207ENST00000575156 REG3AQ06141 175 aa9.36□□□□□ -0.91
ERCC4-207ENST00000575156 MRPS16Q9Y3D3 137 aaKnown RBP9.36□□□□□ -0.91
ERCC4-207ENST00000575156 IGLV10-54A0A075B6I4 117 aa9.35□□□□□ -0.91
ERCC4-207ENST00000575156 IGLV5-45A0A087WSX0 123 aa9.35□□□□□ -0.91
ERCC4-207ENST00000575156 TRAV8-3A0A0A6YYJ7 113 aa9.35□□□□□ -0.91
ERCC4-207ENST00000575156 NUPR2A6NF83 97 aa9.35□□□□□ -0.91
ERCC4-207ENST00000575156 SPINK8P0C7L1 97 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms