RNA–Protein interactions for RNA: ENST00000574911.5

NCBP3-204, Transcript of nuclear cap binding subunit 3, humanhuman

TSL 1 (best)

Gene NCBP3, Length 2,701 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP3-204ENST00000574911 SLC25A20O43772 301 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 PRSS2P07478 247 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 COX6A2Q02221 97 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 TMEM101Q96IK0 257 aa6.41□□□□□ -1.38
NCBP3-204ENST00000574911 TRAV4A0A0B4J268 109 aa6.4□□□□□ -1.38
NCBP3-204ENST00000574911 K7EQD1 137 aa6.4□□□□□ -1.38
NCBP3-204ENST00000574911 NDUFA1O15239 70 aa6.4□□□□□ -1.38
NCBP3-204ENST00000574911 ATXN8Q156A1 80 aa6.4□□□□□ -1.38
NCBP3-204ENST00000574911 Q1RN00 199 aa6.4□□□□□ -1.38
NCBP3-204ENST00000574911 DGAT2L7PQ6IED9 249 aa6.4□□□□□ -1.38
NCBP3-204ENST00000574911 LINC01600Q96MT4 127 aa6.4□□□□□ -1.38
NCBP3-204ENST00000574911 C9JAW5 83 aa6.4□□□□□ -1.39
NCBP3-204ENST00000574911 TRIAP1O43715 76 aa6.4□□□□□ -1.39
NCBP3-204ENST00000574911 LINC00694P0DN24 101 aa6.4□□□□□ -1.39
NCBP3-204ENST00000574911 Q6ZTI0 123 aa6.4□□□□□ -1.39
NCBP3-204ENST00000574911 YAE1D1Q9NRH1 226 aa6.4□□□□□ -1.39
NCBP3-204ENST00000574911 ZNF462Q96JM2 2506 aa6.4□□□□□ -1.39
NCBP3-204ENST00000574911 IGLV5-39A0A0G2JS06 123 aa6.39□□□□□ -1.39
NCBP3-204ENST00000574911 GIG44P09565 113 aaPredicted RBP6.39□□□□□ -1.39
NCBP3-204ENST00000574911 IFITM1P13164 125 aa6.39□□□□□ -1.39
NCBP3-204ENST00000574911 RPL36AP83881 106 aaKnown RBP6.39□□□□□ -1.39
NCBP3-204ENST00000574911 DAZ2Q13117 558 aaKnown RBP6.39□□□□□ -1.39
NCBP3-204ENST00000574911 LINC00242Q5T6M2 205 aa6.39□□□□□ -1.39
NCBP3-204ENST00000574911 NTM-AS1Q6ZSK4 140 aa6.39□□□□□ -1.39
NCBP3-204ENST00000574911 DAZ4Q86SG3 579 aaKnown RBP6.39□□□□□ -1.39
NCBP3-204ENST00000574911 RPL36ALQ969Q0 106 aaKnown RBP6.39□□□□□ -1.39
NCBP3-204ENST00000574911 DAZ3Q9NR90 486 aaKnown RBP6.39□□□□□ -1.39
NCBP3-204ENST00000574911 CSDC2Q9Y534 153 aaKnown RBP6.39□□□□□ -1.39
NCBP3-204ENST00000574911 USP24Q9UPU5 2620 aa6.39□□□□□ -1.39
NCBP3-204ENST00000574911 CMC4P56277 68 aaPredicted RBP6.39□□□□□ -1.39
NCBP3-204ENST00000574911 HERVK_113P63121 156 aa6.39□□□□□ -1.39
NCBP3-204ENST00000574911 LINC01620Q4KN68 170 aa6.38□□□□□ -1.39
NCBP3-204ENST00000574911 C16orf95Q9H693 158 aa6.38□□□□□ -1.39
NCBP3-204ENST00000574911 ICOSQ9Y6W8 199 aa6.38□□□□□ -1.39
NCBP3-204ENST00000574911 TEX15Q9BXT5 2789 aa6.38□□□□□ -1.39
NCBP3-204ENST00000574911 NPC2P61916 151 aa6.38□□□□□ -1.39
NCBP3-204ENST00000574911 ACACBO00763 2458 aa6.38□□□□□ -1.39
NCBP3-204ENST00000574911 PLAC8L1A1L4L8 177 aa6.37□□□□□ -1.39
NCBP3-204ENST00000574911 LINC01006Q8NI28 216 aa6.37□□□□□ -1.39
NCBP3-204ENST00000574911 NBPF19A0A087WUL8 3843 aa6.37□□□□□ -1.39
NCBP3-204ENST00000574911 TRBV10-2A0A0K0K1G8 114 aa6.37□□□□□ -1.39
NCBP3-204ENST00000574911 GAGE12JA6NER3 117 aa6.37□□□□□ -1.39
NCBP3-204ENST00000574911 NDUFA7O95182 113 aa6.37□□□□□ -1.39
NCBP3-204ENST00000574911 KRTAP1-1Q07627 177 aa6.37□□□□□ -1.39
NCBP3-204ENST00000574911 GAGE4Q13068 117 aa6.37□□□□□ -1.39
NCBP3-204ENST00000574911 GAGE5Q13069 117 aa6.37□□□□□ -1.39
NCBP3-204ENST00000574911 NOP10Q9NPE3 64 aaKnown RBP6.37□□□□□ -1.39
NCBP3-204ENST00000574911 CDC42SE2Q9NRR3 84 aa6.37□□□□□ -1.39
NCBP3-204ENST00000574911 SMIM1B2RUZ4 78 aa6.36□□□□□ -1.39
NCBP3-204ENST00000574911 RNASE1P07998 156 aaKnown RBP6.36□□□□□ -1.39
NCBP3-204ENST00000574911 C19orf73Q9NVV2 129 aa6.36□□□□□ -1.39
NCBP3-204ENST00000574911 CIRBPQ14011 172 aaKnown RBP6.36□□□□□ -1.39
NCBP3-204ENST00000574911 C16orf74Q96GX8 76 aa6.36□□□□□ -1.39
NCBP3-204ENST00000574911 FAM110AQ9BQ89 295 aa6.36□□□□□ -1.39
NCBP3-204ENST00000574911 Q9H8V8 135 aa6.36□□□□□ -1.39
NCBP3-204ENST00000574911 CENPEQ02224 2701 aa6.36□□□□□ -1.39
NCBP3-204ENST00000574911 IGLV1-51P01701 117 aa6.35□□□□□ -1.39
NCBP3-204ENST00000574911 MT-ATP8P03928 68 aa6.35□□□□□ -1.39
NCBP3-204ENST00000574911 XGP55808 180 aa6.35□□□□□ -1.39
NCBP3-204ENST00000574911 DAND5Q8N907 189 aa6.35□□□□□ -1.39
NCBP3-204ENST00000574911 TRAV13-1A0A0B4J241 112 aa6.35□□□□□ -1.39
NCBP3-204ENST00000574911 F5H768 121 aa6.35□□□□□ -1.39
NCBP3-204ENST00000574911 LINC00308Q8TCZ7 52 aa6.35□□□□□ -1.39
NCBP3-204ENST00000574911 OVOL2Q9BRP0 275 aa6.35□□□□□ -1.39
NCBP3-204ENST00000574911 WFDC10AQ9H1F0 79 aa6.35□□□□□ -1.39
NCBP3-204ENST00000574911 NAV2Q8IVL1 2488 aa6.35□□□□□ -1.39
NCBP3-204ENST00000574911 FAM208BQ5VWN6 2430 aa6.35□□□□□ -1.39
NCBP3-204ENST00000574911 RPL13AP40429 203 aaKnown RBP6.34□□□□□ -1.39
NCBP3-204ENST00000574911 CSNK1G2-AS1Q8NCQ2 148 aa6.34□□□□□ -1.39
NCBP3-204ENST00000574911 NTN5Q8WTR8 489 aaPredicted RBP6.34□□□□□ -1.39
NCBP3-204ENST00000574911 PTPN13Q12923 2485 aa6.34□□□□□ -1.39
NCBP3-204ENST00000574911 TMEM262E9PQX1 116 aa6.34□□□□□ -1.39
NCBP3-204ENST00000574911 COX6CP09669 75 aa6.34□□□□□ -1.39
NCBP3-204ENST00000574911 RPL35AP18077 110 aaKnown RBP6.34□□□□□ -1.39
NCBP3-204ENST00000574911 HIST2H2BCQ6DN03 193 aa6.34□□□□□ -1.39
NCBP3-204ENST00000574911 ZNF625Q96I27 306 aaPredicted RBP6.34□□□□□ -1.39
NCBP3-204ENST00000574911 TMEM243Q9BU79 118 aa6.34□□□□□ -1.39
NCBP3-204ENST00000574911 CUBNO60494 3623 aa6.34□□□□□ -1.39
NCBP3-204ENST00000574911 ANK3Q12955 4377 aaKnown RBP6.34□□□□□ -1.39
NCBP3-204ENST00000574911 LRRK2Q5S007 2527 aa6.34□□□□□ -1.4
NCBP3-204ENST00000574911 TRBV6-4A0A1B0GX49 114 aa6.34□□□□□ -1.4
NCBP3-204ENST00000574911 LST1O00453 97 aa6.34□□□□□ -1.4
NCBP3-204ENST00000574911 GAGE7O76087 117 aa6.34□□□□□ -1.4
NCBP3-204ENST00000574911 GAGE12FP0CL80 117 aa6.34□□□□□ -1.4
NCBP3-204ENST00000574911 GAGE12GP0CL81 117 aa6.34□□□□□ -1.4
NCBP3-204ENST00000574911 GAGE12IP0CL82 117 aa6.34□□□□□ -1.4
NCBP3-204ENST00000574911 H7C423 109 aa6.33□□□□□ -1.4
NCBP3-204ENST00000574911 APCP25054 2843 aa6.33□□□□□ -1.4
NCBP3-204ENST00000574911 TRGV2A0A075B6R0 118 aa6.33□□□□□ -1.4
NCBP3-204ENST00000574911 LOC100131303A0A0U1RQF7 123 aa6.33□□□□□ -1.4
NCBP3-204ENST00000574911 UBE2L6O14933 153 aa6.33□□□□□ -1.4
NCBP3-204ENST00000574911 SOSTDC1Q6X4U4 206 aa6.33□□□□□ -1.4
NCBP3-204ENST00000574911 CLEC2BQ92478 149 aa6.33□□□□□ -1.4
NCBP3-204ENST00000574911 CREBBPQ92793 2442 aa6.32□□□□□ -1.4
NCBP3-204ENST00000574911 H3BT86 120 aa6.32□□□□□ -1.4
NCBP3-204ENST00000574911 OXLD1Q5BKU9 147 aa6.32□□□□□ -1.4
NCBP3-204ENST00000574911 COPS9Q8WXC6 57 aa6.32□□□□□ -1.4
NCBP3-204ENST00000574911 ZFYVE26Q68DK2 2539 aa6.32□□□□□ -1.4
NCBP3-204ENST00000574911 HERV-K104P63124 156 aa6.32□□□□□ -1.4
NCBP3-204ENST00000574911 C2orf82Q6UX34 121 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms