RNA–Protein interactions for RNA: ENST00000574501.1

SMG6-215, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

Gene SMG6, Length 2,419 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-215ENST00000574501 ATP5G1P05496 136 aa10.45□□□□□ -0.74
SMG6-215ENST00000574501 RBMY1A1P0DJD3 496 aaKnown RBP10.45□□□□□ -0.74
SMG6-215ENST00000574501 RBMY1CP0DJD4 496 aa10.45□□□□□ -0.74
SMG6-215ENST00000574501 HOXD3P31249 432 aaPredicted RBP10.45□□□□□ -0.74
SMG6-215ENST00000574501 RBMY1FQ15415 496 aaKnown RBP10.45□□□□□ -0.74
SMG6-215ENST00000574501 C5orf47Q569G3 176 aa10.45□□□□□ -0.74
SMG6-215ENST00000574501 LRRC75A-AS1Q8N1F1 130 aa10.45□□□□□ -0.74
SMG6-215ENST00000574501 CXCL5P42830 114 aa10.45□□□□□ -0.74
SMG6-215ENST00000574501 SNRPD3P62318 126 aaKnown RBP10.45□□□□□ -0.74
SMG6-215ENST00000574501 ATRXP46100 2492 aa10.45□□□□□ -0.74
SMG6-215ENST00000574501 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.45□□□□□ -0.74
SMG6-215ENST00000574501 KLRB1Q12918 225 aa10.44□□□□□ -0.74
SMG6-215ENST00000574501 TRACP01848 142 aa10.44□□□□□ -0.74
SMG6-215ENST00000574501 H3BUX3 64 aa10.43□□□□□ -0.74
SMG6-215ENST00000574501 CRYGAP11844 174 aa10.43□□□□□ -0.74
SMG6-215ENST00000574501 UCNP55089 124 aa10.43□□□□□ -0.74
SMG6-215ENST00000574501 ITPR1Q14643 2758 aa10.42□□□□□ -0.74
SMG6-215ENST00000574501 PIK3CD-AS1Q5SR53 167 aa10.42□□□□□ -0.74
SMG6-215ENST00000574501 EPG5Q9HCE0 2579 aa10.42□□□□□ -0.74
SMG6-215ENST00000574501 IGKV3D-7A0A0C4DH55 119 aa10.42□□□□□ -0.74
SMG6-215ENST00000574501 A0A1B0GX51 115 aa10.42□□□□□ -0.74
SMG6-215ENST00000574501 H3BUA1 57 aa10.42□□□□□ -0.74
SMG6-215ENST00000574501 K7EMT4 169 aa10.42□□□□□ -0.74
SMG6-215ENST00000574501 ADORA2A-AS1P86434 159 aa10.42□□□□□ -0.74
SMG6-215ENST00000574501 DGAT2L7PQ6IED9 249 aa10.42□□□□□ -0.74
SMG6-215ENST00000574501 SYNJ2BPP57105 145 aa10.41□□□□□ -0.74
SMG6-215ENST00000574501 C9orf129Q5T035 196 aaKnown RBP10.41□□□□□ -0.74
SMG6-215ENST00000574501 KIR2DL5BQ8NHK3 375 aa10.41□□□□□ -0.74
SMG6-215ENST00000574501 CREBBPQ92793 2442 aa10.41□□□□□ -0.74
SMG6-215ENST00000574501 ABCA2Q9BZC7 2435 aa10.41□□□□□ -0.74
SMG6-215ENST00000574501 ATOX1O00244 68 aa10.41□□□□□ -0.74
SMG6-215ENST00000574501 INAFM2P0DMQ5 153 aa10.41□□□□□ -0.74
SMG6-215ENST00000574501 HIST1H4AP62805 103 aaKnown RBP10.41□□□□□ -0.74
SMG6-215ENST00000574501 PRIMA1Q86XR5 153 aa10.41□□□□□ -0.74
SMG6-215ENST00000574501 IGHV3OR16-12A0A075B7B8 117 aa10.4□□□□□ -0.74
SMG6-215ENST00000574501 K7EQG2 157 aa10.4□□□□□ -0.74
SMG6-215ENST00000574501 IGLV1-40P01703 118 aa10.4□□□□□ -0.74
SMG6-215ENST00000574501 IGHV4-38-2P0DP08 117 aa10.4□□□□□ -0.74
SMG6-215ENST00000574501 MALP21145 153 aa10.4□□□□□ -0.74
SMG6-215ENST00000574501 IGLV5-45A0A087WSX0 123 aa10.39□□□□□ -0.75
SMG6-215ENST00000574501 C10orf99Q6UWK7 81 aa10.39□□□□□ -0.75
SMG6-215ENST00000574501 A0A087WVE0 104 aa10.39□□□□□ -0.75
SMG6-215ENST00000574501 LINC00242Q5T6M2 205 aa10.39□□□□□ -0.75
SMG6-215ENST00000574501 IGLV5-39A0A0G2JS06 123 aa10.38□□□□□ -0.75
SMG6-215ENST00000574501 C14orf132Q9NPU4 83 aa10.38□□□□□ -0.75
SMG6-215ENST00000574501 USP24Q9UPU5 2620 aa10.38□□□□□ -0.75
SMG6-215ENST00000574501 CELSR2Q9HCU4 2923 aa10.38□□□□□ -0.75
SMG6-215ENST00000574501 SMIM1B2RUZ4 78 aa10.37□□□□□ -0.75
SMG6-215ENST00000574501 FAM222AQ5U5X8 452 aa10.37□□□□□ -0.75
SMG6-215ENST00000574501 DNAL4O96015 105 aa10.37□□□□□ -0.75
SMG6-215ENST00000574501 RPL18AQ02543 176 aaKnown RBP10.37□□□□□ -0.75
SMG6-215ENST00000574501 HIST2H2BCQ6DN03 193 aa10.36□□□□□ -0.75
SMG6-215ENST00000574501 HIST2H2BDQ6DRA6 164 aa10.36□□□□□ -0.75
SMG6-215ENST00000574501 COPS9Q8WXC6 57 aa10.36□□□□□ -0.75
SMG6-215ENST00000574501 PIMREGQ9BSJ6 248 aa10.36□□□□□ -0.75
SMG6-215ENST00000574501 A0A087WYN8 130 aa10.35□□□□□ -0.75
SMG6-215ENST00000574501 A6NDX4 124 aa10.35□□□□□ -0.75
SMG6-215ENST00000574501 RPS28P62857 69 aaKnown RBP10.35□□□□□ -0.75
SMG6-215ENST00000574501 OR13C6PQ8NH95 151 aa10.35□□□□□ -0.75
SMG6-215ENST00000574501 ZFYVE26Q68DK2 2539 aa10.35□□□□□ -0.75
SMG6-215ENST00000574501 DPH3Q96FX2 82 aa10.35□□□□□ -0.75
SMG6-215ENST00000574501 DSCR8Q96T75 97 aa10.35□□□□□ -0.75
SMG6-215ENST00000574501 LINC00846Q9NV44 126 aa10.35□□□□□ -0.75
SMG6-215ENST00000574501 CFHR3Q02985 330 aa10.34□□□□□ -0.75
SMG6-215ENST00000574501 OXTP01178 125 aa10.33□□□□□ -0.76
SMG6-215ENST00000574501 LINC00337Q8N6G1 96 aa10.33□□□□□ -0.76
SMG6-215ENST00000574501 RPL28P46779 137 aaKnown RBP10.32□□□□□ -0.76
SMG6-215ENST00000574501 PRORYQ9H606 182 aa10.32□□□□□ -0.76
SMG6-215ENST00000574501 IGHV3-53P01767 116 aa10.32□□□□□ -0.76
SMG6-215ENST00000574501 CRPP02741 224 aa10.32□□□□□ -0.76
SMG6-215ENST00000574501 LINC01561Q8N1V8 128 aa10.32□□□□□ -0.76
SMG6-215ENST00000574501 SERP2Q8N6R1 65 aa10.32□□□□□ -0.76
SMG6-215ENST00000574501 PSMB8P28062 276 aa10.31□□□□□ -0.76
SMG6-215ENST00000574501 DEFB131AP59861 70 aa10.31□□□□□ -0.76
SMG6-215ENST00000574501 UPK3BQ9BT76 320 aa10.31□□□□□ -0.76
SMG6-215ENST00000574501 IGKV2-28A0A075B6P5 120 aa10.31□□□□□ -0.76
SMG6-215ENST00000574501 TRAV13-2A0A0B4J235 113 aa10.31□□□□□ -0.76
SMG6-215ENST00000574501 RBMY1BA6NDE4 496 aaKnown RBP10.31□□□□□ -0.76
SMG6-215ENST00000574501 RBMY1EA6NEQ0 496 aaKnown RBP10.31□□□□□ -0.76
SMG6-215ENST00000574501 IGKV2D-28P01615 120 aa10.31□□□□□ -0.76
SMG6-215ENST00000574501 RBMY1DP0C7P1 496 aaKnown RBP10.31□□□□□ -0.76
SMG6-215ENST00000574501 ZNF415Q09FC8 603 aa10.31□□□□□ -0.76
SMG6-215ENST00000574501 RNF152Q8N8N0 203 aa10.31□□□□□ -0.76
SMG6-215ENST00000574501 IGSF10Q6WRI0 2623 aa10.3□□□□□ -0.76
SMG6-215ENST00000574501 NCR3O14931 201 aa10.3□□□□□ -0.76
SMG6-215ENST00000574501 TMEM258P61165 79 aa10.3□□□□□ -0.76
SMG6-215ENST00000574501 C4orf26Q17RF5 130 aa10.3□□□□□ -0.76
SMG6-215ENST00000574501 SMIM11BQ8TCY0 68 aa10.3□□□□□ -0.76
SMG6-215ENST00000574501 Q96MF0 132 aa10.3□□□□□ -0.76
SMG6-215ENST00000574501 CSPG4Q6UVK1 2322 aa10.3□□□□□ -0.76
SMG6-215ENST00000574501 F5H768 121 aa10.29□□□□□ -0.76
SMG6-215ENST00000574501 USP17L23D6RBM5 183 aa10.29□□□□□ -0.76
SMG6-215ENST00000574501 SLPIP03973 132 aa10.29□□□□□ -0.76
SMG6-215ENST00000574501 MIR7-3HGQ8N6C7 128 aa10.29□□□□□ -0.76
SMG6-215ENST00000574501 C2CD3Q4AC94 2353 aa10.29□□□□□ -0.76
SMG6-215ENST00000574501 IGHV4-61A0A0C4DH41 118 aa10.28□□□□□ -0.76
SMG6-215ENST00000574501 Q6JHZ5 121 aa10.28□□□□□ -0.76
SMG6-215ENST00000574501 SND1-IT1Q9HBX3 110 aa10.28□□□□□ -0.76
SMG6-215ENST00000574501 LECT2O14960 151 aa10.27□□□□□ -0.77
SMG6-215ENST00000574501 PF4P02776 101 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms