RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 SMIM2Q9BVW6 85 aa7.37□□□□□ -1.23
CHD3-216ENST00000573936 IGKV2D-24A0A075B6R9 120 aa7.36□□□□□ -1.23
CHD3-216ENST00000573936 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.36□□□□□ -1.23
CHD3-216ENST00000573936 IGKV2-29A2NJV5 120 aaPredicted RBP7.36□□□□□ -1.23
CHD3-216ENST00000573936 PRSS47A8MTI9 375 aa7.36□□□□□ -1.23
CHD3-216ENST00000573936 RNASEKQ6P5S7 137 aaKnown RBP7.36□□□□□ -1.23
CHD3-216ENST00000573936 ENHOQ6UWT2 76 aa7.36□□□□□ -1.23
CHD3-216ENST00000573936 LINC00269Q8N2A0 174 aa7.36□□□□□ -1.23
CHD3-216ENST00000573936 C20orf203Q8NBC4 194 aa7.36□□□□□ -1.23
CHD3-216ENST00000573936 C1orf43Q9BWL3 253 aa7.36□□□□□ -1.23
CHD3-216ENST00000573936 MAP1LC3AQ9H492 121 aa7.36□□□□□ -1.23
CHD3-216ENST00000573936 PRR34Q9NV39 138 aa7.36□□□□□ -1.23
CHD3-216ENST00000573936 IGLV4-60A0A075B6I1 120 aa7.35□□□□□ -1.23
CHD3-216ENST00000573936 A0A087WTM6 91 aa7.35□□□□□ -1.23
CHD3-216ENST00000573936 TRAV8-4A0A0B4J246 113 aa7.35□□□□□ -1.23
CHD3-216ENST00000573936 CDK2AP2O75956 126 aa7.35□□□□□ -1.23
CHD3-216ENST00000573936 FGF6P10767 208 aa7.35□□□□□ -1.23
CHD3-216ENST00000573936 REG3AQ06141 175 aa7.35□□□□□ -1.23
CHD3-216ENST00000573936 C18orf32Q8TCD1 76 aa7.35□□□□□ -1.23
CHD3-216ENST00000573936 LOC389332A0A1B0GUA5 103 aa7.34□□□□□ -1.23
CHD3-216ENST00000573936 MRPL52Q86TS9 123 aaKnown RBP7.34□□□□□ -1.23
CHD3-216ENST00000573936 PGPEP1Q9NXJ5 209 aa7.34□□□□□ -1.23
CHD3-216ENST00000573936 LRCOL1A6NCL2 159 aa7.33□□□□□ -1.24
CHD3-216ENST00000573936 C1orf196B1AJZ1 125 aa7.33□□□□□ -1.24
CHD3-216ENST00000573936 DGAT2L7PQ6IED9 249 aa7.33□□□□□ -1.24
CHD3-216ENST00000573936 SPATA12Q7Z6I5 190 aa7.33□□□□□ -1.24
CHD3-216ENST00000573936 OR5A1Q8NGJ0 315 aa7.33□□□□□ -1.24
CHD3-216ENST00000573936 CSDC2Q9Y534 153 aaKnown RBP7.33□□□□□ -1.24
CHD3-216ENST00000573936 K7EMI3 77 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 HIST1H2BKO60814 126 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 HIST1H2BJP06899 126 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 HIST1H2BOP23527 126 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 HIST1H2BBP33778 126 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 IFI27P40305 119 aaPredicted RBP7.32□□□□□ -1.24
CHD3-216ENST00000573936 HIST1H2BDP58876 126 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 HIST1H2BCP62807 126 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 HIST2H2BEQ16778 126 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.32□□□□□ -1.24
CHD3-216ENST00000573936 CDPF1Q6NVV7 123 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 CLPSL2Q6UWE3 100 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 Q8N8P6 123 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 HIST1H2BHQ93079 126 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 HIST1H2BNQ99877 126 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 HIST1H2BMQ99879 126 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 TIMM21Q9BVV7 248 aa7.32□□□□□ -1.24
CHD3-216ENST00000573936 NXT2Q9NPJ8 142 aaKnown RBP7.32□□□□□ -1.24
CHD3-216ENST00000573936 G0S2P27469 103 aa7.31□□□□□ -1.24
CHD3-216ENST00000573936 NTN5Q8WTR8 489 aaPredicted RBP7.31□□□□□ -1.24
CHD3-216ENST00000573936 BAALCQ8WXS3 180 aa7.31□□□□□ -1.24
CHD3-216ENST00000573936 URB1-AS1Q96HZ7 61 aa7.31□□□□□ -1.24
CHD3-216ENST00000573936 LINC01546A6NGU7 62 aa7.3□□□□□ -1.24
CHD3-216ENST00000573936 C14orf177Q52M58 125 aa7.3□□□□□ -1.24
CHD3-216ENST00000573936 ORMDL2Q53FV1 153 aa7.3□□□□□ -1.24
CHD3-216ENST00000573936 Q8N1X5 172 aa7.3□□□□□ -1.24
CHD3-216ENST00000573936 ZNF664Q8N3J9 261 aa7.3□□□□□ -1.24
CHD3-216ENST00000573936 Q8N814 137 aa7.3□□□□□ -1.24
CHD3-216ENST00000573936 PRSS3P2Q8NHM4 247 aa7.3□□□□□ -1.24
CHD3-216ENST00000573936 CDC42SE2Q9NRR3 84 aa7.3□□□□□ -1.24
CHD3-216ENST00000573936 UBE2D4Q9Y2X8 147 aa7.3□□□□□ -1.24
CHD3-216ENST00000573936 IGKV3OR2-268A0A0C4DH90 116 aa7.29□□□□□ -1.24
CHD3-216ENST00000573936 CCL25O15444 150 aa7.29□□□□□ -1.24
CHD3-216ENST00000573936 LINC00310P59036 64 aa7.29□□□□□ -1.24
CHD3-216ENST00000573936 KRTAP10-2P60368 255 aa7.29□□□□□ -1.24
CHD3-216ENST00000573936 RAB5BP61020 215 aa7.29□□□□□ -1.24
CHD3-216ENST00000573936 FA2HQ7L5A8 372 aa7.29□□□□□ -1.24
CHD3-216ENST00000573936 BAGE3Q86Y29 109 aa7.29□□□□□ -1.24
CHD3-216ENST00000573936 SPANXA1Q9NS26 97 aa7.29□□□□□ -1.24
CHD3-216ENST00000573936 HERC1Q15751 4861 aa7.29□□□□□ -1.24
CHD3-216ENST00000573936 IGLV10-54A0A075B6I4 117 aa7.28□□□□□ -1.24
CHD3-216ENST00000573936 SS18Q15532 418 aa7.28□□□□□ -1.24
CHD3-216ENST00000573936 KRTAP26-1Q6PEX3 210 aa7.28□□□□□ -1.24
CHD3-216ENST00000573936 FAT1Q14517 4588 aa7.27□□□□□ -1.25
CHD3-216ENST00000573936 LINC00959A0A1B0GUT2 108 aa7.27□□□□□ -1.25
CHD3-216ENST00000573936 LECT2O14960 151 aa7.27□□□□□ -1.25
CHD3-216ENST00000573936 SERF1AO75920 110 aa7.27□□□□□ -1.25
CHD3-216ENST00000573936 LINC00614P0C842 121 aa7.27□□□□□ -1.25
CHD3-216ENST00000573936 RPL39P62891 51 aaKnown RBP7.27□□□□□ -1.25
CHD3-216ENST00000573936 MRPS36P82909 103 aaKnown RBP7.27□□□□□ -1.25
CHD3-216ENST00000573936 CFAP161Q6P656 301 aa7.27□□□□□ -1.25
CHD3-216ENST00000573936 AP5S1Q9NUS5 200 aa7.27□□□□□ -1.25
CHD3-216ENST00000573936 CYSLTR1Q9Y271 337 aa7.27□□□□□ -1.25
CHD3-216ENST00000573936 PYGO1Q9Y3Y4 419 aa7.27□□□□□ -1.25
CHD3-216ENST00000573936 IGLV5-52A0A0A0MRZ9 124 aa7.26□□□□□ -1.25
CHD3-216ENST00000573936 GAGE12HA6NDE8 117 aa7.26□□□□□ -1.25
CHD3-216ENST00000573936 LINC01549A6NIU2 74 aa7.26□□□□□ -1.25
CHD3-216ENST00000573936 NUPR1O60356 82 aa7.26□□□□□ -1.25
CHD3-216ENST00000573936 NDUFA6P56556 154 aa7.26□□□□□ -1.25
CHD3-216ENST00000573936 WFDC2Q14508 124 aa7.26□□□□□ -1.25
CHD3-216ENST00000573936 CHCHD10Q8WYQ3 142 aaPredicted RBP7.26□□□□□ -1.25
CHD3-216ENST00000573936 CHCHD1Q96BP2 118 aaKnown RBP7.26□□□□□ -1.25
CHD3-216ENST00000573936 A0A096LNJ9 63 aa7.25□□□□□ -1.25
CHD3-216ENST00000573936 USP17L23D6RBM5 183 aa7.25□□□□□ -1.25
CHD3-216ENST00000573936 NPSP0C0P6 89 aa7.25□□□□□ -1.25
CHD3-216ENST00000573936 PMCHL1Q16048 86 aa7.25□□□□□ -1.25
CHD3-216ENST00000573936 COA6Q5JTJ3 125 aaKnown RBP7.25□□□□□ -1.25
CHD3-216ENST00000573936 C2orf66Q6UXQ4 117 aa7.25□□□□□ -1.25
CHD3-216ENST00000573936 GCSHP23434 173 aa7.24□□□□□ -1.25
CHD3-216ENST00000573936 CD164L2Q6UWJ8 174 aa7.24□□□□□ -1.25
CHD3-216ENST00000573936 Q6ZUT4 128 aa7.24□□□□□ -1.25
CHD3-216ENST00000573936 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 120.6 ms