RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 PRB4P10163 310 aaPredicted RBP3.37□□□□□ -1.87
CDC27-215ENST00000573550 NDUFA11Q86Y39 141 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 C10orf126Q8N4M7 172 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 C20orf203Q8NBC4 194 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 AMELXQ99217 191 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 SIGMAR1Q99720 223 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 PPDPFQ9H3Y8 114 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 COL6A6A6NMZ7 2263 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 CHD8Q9HCK8 2581 aa3.37□□□□□ -1.87
CDC27-215ENST00000573550 SPTAN1Q13813 2472 aaKnown RBP3.36□□□□□ -1.87
CDC27-215ENST00000573550 PKD1L2Q7Z442 2459 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 NCOR2Q9Y618 2525 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.36□□□□□ -1.87
CDC27-215ENST00000573550 TMEM223A0PJW6 202 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 A8MWV9 139 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 I3L3M4 83 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 J3QQQ9 107 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 APOMO95445 188 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 TSPAN13O95857 204 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 IGHV3-30P01768 117 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 GIG44P09565 113 aaPredicted RBP3.36□□□□□ -1.87
CDC27-215ENST00000573550 P0DMU3 169 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 FAM231AP0DMU4 169 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 FAM231CP0DMU5 169 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 IGHV3-30-5P0DP03 117 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 LGALS3P17931 250 aaKnown RBP3.36□□□□□ -1.87
CDC27-215ENST00000573550 AMTNQ6UX39 209 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 BRD3OSQ6XYD6 125 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 Q6ZQT7 251 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 TEN1Q86WV5 123 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 MTURNQ8N3F0 131 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 PPDPFLQ8WWR9 84 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 UBE2E2Q96LR5 201 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 NAA38Q9BRA0 125 aaKnown RBP3.36□□□□□ -1.87
CDC27-215ENST00000573550 SPANXA1Q9NS26 97 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 SPTBN4Q9H254 2564 aa3.36□□□□□ -1.87
CDC27-215ENST00000573550 PRRC2AP48634 2157 aaKnown RBP3.35□□□□□ -1.87
CDC27-215ENST00000573550 AKAP6Q13023 2319 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 CFAP46Q8IYW2 2715 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 A0A096LNT2 108 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 A0A0J9YXY3 114 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 A0A1B0GV72 72 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 F6UB75 175 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 C19orf84I3L1E1 186 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 GNRH2O43555 120 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 TIMM17BO60830 172 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 IGHV3-11P01762 117 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 ATP5J2P56134 94 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 MRPS36P82909 103 aaKnown RBP3.35□□□□□ -1.87
CDC27-215ENST00000573550 WFDC2Q14508 124 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 ZNF56Q15929 161 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 ETDBQ3ZM63 59 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 Q8N2B8 174 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 DNAJC30Q96LL9 226 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 TIMM21Q9BVV7 248 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 PRO1854Q9UHT4 67 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 VPREB3Q9UKI3 123 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 CREBBPQ92793 2442 aa3.35□□□□□ -1.87
CDC27-215ENST00000573550 TRAV12-3A0A0B4J271 114 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 TINCRA0A1B0GVN0 87 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 TMEM262E9PQX1 116 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 ZNF22P17026 224 aaPredicted RBP3.34□□□□□ -1.87
CDC27-215ENST00000573550 TSPEAR-AS2P59090 65 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 BLCAPP62952 87 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 LY6EQ16553 131 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 TMEM170BQ5T4T1 132 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 TEX29Q8N6K0 151 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 ZNRF2Q8NHG8 242 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 SPXQ9BT56 116 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 SPANXDQ9BXN6 97 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 SPANXCQ9NY87 97 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 LINC00527Q9UJ94 153 aa3.34□□□□□ -1.87
CDC27-215ENST00000573550 TSSC4Q9Y5U2 329 aaPredicted RBP3.34□□□□□ -1.87
CDC27-215ENST00000573550 USP9XQ93008 2570 aaPredicted RBP3.34□□□□□ -1.88
CDC27-215ENST00000573550 MED13LQ71F56 2210 aa3.34□□□□□ -1.88
CDC27-215ENST00000573550 TRBV30A0A0K0K1B3 111 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 M0R2P5 195 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 IGHV3-33P01772 117 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 ZNF688P0C7X2 276 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 IFITM1P13164 125 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 RPL13AP40429 203 aaKnown RBP3.33□□□□□ -1.88
CDC27-215ENST00000573550 RPL39P62891 51 aaKnown RBP3.33□□□□□ -1.88
CDC27-215ENST00000573550 SMAGPQ0VAQ4 97 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 KRTAP5-4Q6L8H1 288 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 FAM19A3Q7Z5A8 133 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 TMEM86BQ8N661 226 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 TMEM263Q8WUH6 116 aaKnown RBP3.33□□□□□ -1.88
CDC27-215ENST00000573550 COPS9Q8WXC6 57 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 YAE1D1Q9NRH1 226 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 Q9UF83 564 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 CELA1Q9UNI1 258 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 DCHS1Q96JQ0 3298 aa3.33□□□□□ -1.88
CDC27-215ENST00000573550 DOPEY2Q9Y3R5 2298 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 PIEZO1Q92508 2521 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 MYO18BQ8IUG5 2567 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 FLNCQ14315 2725 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 TRAV25A0A0B4J276 109 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 IGHV1-58A0A0C4DH39 117 aa3.32□□□□□ -1.88
CDC27-215ENST00000573550 LOC107984156A0A0G2JMH3 177 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms