RNA–Protein interactions for RNA: ENST00000573018.1

ERCC4-204, Transcript of ERCC excision repair 4, endonuclease catalytic subunit, humanhuman

TSL 2

Gene ERCC4, Length 523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4-204ENST00000573018 RBMY1CP0DJD4 496 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 LYNX1P0DP58 116 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 CD24P25063 80 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 FXYD2P54710 66 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 HERVK_113P63121 156 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 ETDBQ3ZM63 59 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 FAM74A4Q5TZK3 123 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 ZFP2Q6ZN57 461 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 APRG1Q8IVJ8 170 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 SLC25A29Q8N8R3 303 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 ZNF418Q8TF45 676 aaPredicted RBP1.92□□□□□ -2.1
ERCC4-204ENST00000573018 ITLN2Q8WWU7 325 aaPredicted RBP1.92□□□□□ -2.1
ERCC4-204ENST00000573018 BAALCQ8WXS3 180 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 PTH2Q96A98 100 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 UBE2WQ96B02 151 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 BPESC1Q9GZL8 116 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 EDA2RQ9HAV5 297 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 HHLA3Q9XRX5 114 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 TSSC4Q9Y5U2 329 aaPredicted RBP1.92□□□□□ -2.1
ERCC4-204ENST00000573018 S4R3C0 116 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 SPTBN1Q01082 2364 aaKnown RBP1.92□□□□□ -2.1
ERCC4-204ENST00000573018 ZFHX2Q9C0A1 2572 aaPredicted RBP1.92□□□□□ -2.1
ERCC4-204ENST00000573018 LAMA1P25391 3075 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 XIRP2A4UGR9 3374 aa1.92□□□□□ -2.1
ERCC4-204ENST00000573018 APC2O95996 2303 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 ARFGEF3Q5TH69 2177 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 IGLV2-18A0A075B6J9 118 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 TRAV26-1A0A087WT03 109 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 A0A096LNJ9 63 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 TRAV13-2A0A0B4J235 113 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 TRAV26-2A0A0B4J265 109 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 TRAV12-3A0A0B4J271 114 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 IGHV3-66A0A0C4DH42 116 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 TRBV10-1A0A0K0K1A3 114 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 TRBV30A0A0K0K1B3 111 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 TINCRA0A1B0GVN0 87 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 CRPP02741 224 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 COX6B1P14854 86 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 ZNF80P51504 273 aaPredicted RBP1.91□□□□□ -2.1
ERCC4-204ENST00000573018 DAZ2Q13117 558 aaKnown RBP1.91□□□□□ -2.1
ERCC4-204ENST00000573018 CFAP126Q5VTH2 177 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 Q6Q795 121 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 C2orf82Q6UX34 121 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 DAZ4Q86SG3 579 aaKnown RBP1.91□□□□□ -2.1
ERCC4-204ENST00000573018 NDUFA11Q86Y39 141 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 TMEM86BQ8N661 226 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 ANKRD29Q8N6D5 301 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 ZFAND2AQ8N6M9 145 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 C20orf203Q8NBC4 194 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 LINC01006Q8NI28 216 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 C16orf74Q96GX8 76 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 UBE2E2Q96LR5 201 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 LINC00467Q9BRT7 94 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 IMUPQ9GZP8 106 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 GTSF1LQ9H1H1 148 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 PRORYQ9H606 182 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 DAZ3Q9NR90 486 aaKnown RBP1.91□□□□□ -2.1
ERCC4-204ENST00000573018 NDUFA12Q9UI09 145 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 VPREB3Q9UKI3 123 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 ZNF292O60281 2723 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 PCNX1Q96RV3 2341 aa1.91□□□□□ -2.1
ERCC4-204ENST00000573018 UNC80Q8N2C7 3258 aa1.9□□□□□ -2.1
ERCC4-204ENST00000573018 IGKV3-7A0A075B6H7 116 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 TRBV7-3A0A075B6L6 115 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3OR16-13A0A075B7E8 117 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3-49A0A0A0MS15 119 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV3-74A0A0B4J1X5 117 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 TRAV4A0A0B4J268 109 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 IGHV1-58A0A0C4DH39 117 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 A0A0J9YY99 117 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 TRBV10-2A0A0K0K1G8 114 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 CLPSL1A2RUU4 121 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 A6NDX4 124 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 C9JAW5 83 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 G3V318 75 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 H0YGX0 51 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 K7ERJ3 54 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 TSPAN13O95857 204 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 UBE2D1P51668 147 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 POLR2KP53803 58 aaKnown RBP1.9□□□□□ -2.11
ERCC4-204ENST00000573018 FXYD7P58549 80 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 UBE2D3P61077 147 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 UBE2D2P62837 147 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 MRPS36P82909 103 aaKnown RBP1.9□□□□□ -2.11
ERCC4-204ENST00000573018 LOXL1Q08397 574 aaPredicted RBP1.9□□□□□ -2.11
ERCC4-204ENST00000573018 LY6EQ16553 131 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 MIAQ16674 131 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 MEIG1Q5JSS6 88 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 MUC7Q8TAX7 377 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 C10orf105Q8TEF2 133 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 FAM19A4Q96LR4 140 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 LINC01587Q99440 93 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 TMEM126AQ9H061 195 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 ABCA1O95477 2261 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 SZT2Q5T011 3432 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 MUC6Q6W4X9 2439 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 REV3LO60673 3130 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 VCANP13611 3396 aa1.9□□□□□ -2.11
ERCC4-204ENST00000573018 ABCA4P78363 2273 aa1.89□□□□□ -2.11
ERCC4-204ENST00000573018 PTPRQQ9UMZ3 2332 aa1.89□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms