RNA–Protein interactions for RNA: ENST00000572428.5

TVP23A-205, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 1 (best)

Gene TVP23A, Length 3,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-205ENST00000572428 NDPQ00604 133 aa6.56□□□□□ -1.36
TVP23A-205ENST00000572428 SCGB1D4Q6XE38 83 aa6.56□□□□□ -1.36
TVP23A-205ENST00000572428 ARL17AQ8IVW1 177 aa6.56□□□□□ -1.36
TVP23A-205ENST00000572428 MPLKIPQ8TAP9 179 aa6.56□□□□□ -1.36
TVP23A-205ENST00000572428 VSIG2Q96IQ7 327 aa6.56□□□□□ -1.36
TVP23A-205ENST00000572428 ZANQ9Y493 2812 aa6.55□□□□□ -1.36
TVP23A-205ENST00000572428 IGHV4-59P01825 116 aa6.55□□□□□ -1.36
TVP23A-205ENST00000572428 IL4P05112 153 aa6.55□□□□□ -1.36
TVP23A-205ENST00000572428 WNK1Q9H4A3 2382 aa6.55□□□□□ -1.36
TVP23A-205ENST00000572428 LGALS3P17931 250 aaKnown RBP6.54□□□□□ -1.36
TVP23A-205ENST00000572428 SYNJ2BPP57105 145 aa6.54□□□□□ -1.36
TVP23A-205ENST00000572428 ZNF492Q9P255 531 aa6.54□□□□□ -1.36
TVP23A-205ENST00000572428 HECTD1Q9ULT8 2610 aa6.54□□□□□ -1.36
TVP23A-205ENST00000572428 PDE6HQ13956 83 aa6.54□□□□□ -1.36
TVP23A-205ENST00000572428 FLNAP21333 2647 aaKnown RBP6.54□□□□□ -1.36
TVP23A-205ENST00000572428 PLA2G1BP04054 148 aaKnown RBP6.54□□□□□ -1.36
TVP23A-205ENST00000572428 Q8N8P6 123 aa6.54□□□□□ -1.36
TVP23A-205ENST00000572428 ZNF747Q9BV97 191 aa6.54□□□□□ -1.36
TVP23A-205ENST00000572428 TTTY13Q9BZ97 58 aa6.54□□□□□ -1.36
TVP23A-205ENST00000572428 SLC50A1Q9BRV3 221 aa6.53□□□□□ -1.36
TVP23A-205ENST00000572428 NACAE9PAV3 2078 aa6.53□□□□□ -1.36
TVP23A-205ENST00000572428 H3BUA1 57 aa6.53□□□□□ -1.36
TVP23A-205ENST00000572428 ATP6V0E1O15342 81 aa6.53□□□□□ -1.36
TVP23A-205ENST00000572428 NDUFS5O43920 106 aa6.53□□□□□ -1.36
TVP23A-205ENST00000572428 C11orf72Q8NBR9 251 aa6.53□□□□□ -1.36
TVP23A-205ENST00000572428 MYMXA0A1B0GTQ4 84 aa6.52□□□□□ -1.36
TVP23A-205ENST00000572428 F8W735 103 aaPredicted RBP6.52□□□□□ -1.36
TVP23A-205ENST00000572428 SMCR5Q8TEV8 140 aa6.52□□□□□ -1.36
TVP23A-205ENST00000572428 SMR3AQ99954 134 aa6.52□□□□□ -1.36
TVP23A-205ENST00000572428 TRBV25-1A0A075B6N4 114 aa6.52□□□□□ -1.37
TVP23A-205ENST00000572428 IGHV3-49A0A0A0MS15 119 aa6.52□□□□□ -1.37
TVP23A-205ENST00000572428 Q6ZSV7 163 aa6.52□□□□□ -1.37
TVP23A-205ENST00000572428 C2CD3Q4AC94 2353 aa6.52□□□□□ -1.37
TVP23A-205ENST00000572428 TRAV8-3A0A0A6YYJ7 113 aa6.52□□□□□ -1.37
TVP23A-205ENST00000572428 TRBV27A0A0K0K1C4 114 aa6.52□□□□□ -1.37
TVP23A-205ENST00000572428 LY6EQ16553 131 aa6.52□□□□□ -1.37
TVP23A-205ENST00000572428 LINC01600Q96MT4 127 aa6.52□□□□□ -1.37
TVP23A-205ENST00000572428 GFRA4Q9GZZ7 299 aa6.52□□□□□ -1.37
TVP23A-205ENST00000572428 IGKV3-7A0A075B6H7 116 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 IGHV3-66A0A0C4DH42 116 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 NPYP01303 97 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 IGLV1-40P01703 118 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 FAM229BQ4G0N7 80 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 PIK3CD-AS1Q5SR53 167 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 IGFL4Q6B9Z1 124 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 ZNF414Q96IQ9 312 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 ZNF702PQ9H963 129 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 KLLNB2CW77 178 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 TRIAP1O43715 76 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 RNASE1P07998 156 aaKnown RBP6.51□□□□□ -1.37
TVP23A-205ENST00000572428 CTSGP08311 255 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 BLCAPP62952 87 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 FAM104BQ5XKR9 115 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 Q86TA4 180 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 RPP21Q9H633 154 aaKnown RBP6.51□□□□□ -1.37
TVP23A-205ENST00000572428 DNAJC9-AS1A6NH13 148 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 SOSTDC1Q6X4U4 206 aa6.51□□□□□ -1.37
TVP23A-205ENST00000572428 MXRA5Q9NR99 2828 aa6.5□□□□□ -1.37
TVP23A-205ENST00000572428 Q75L30 129 aa6.5□□□□□ -1.37
TVP23A-205ENST00000572428 TRBV7-1A0A0A6YYK4 115 aa6.5□□□□□ -1.37
TVP23A-205ENST00000572428 CYSRT1A8MQ03 144 aa6.5□□□□□ -1.37
TVP23A-205ENST00000572428 H7BZZ5 65 aa6.5□□□□□ -1.37
TVP23A-205ENST00000572428 IGLV2-11P01706 119 aa6.5□□□□□ -1.37
TVP23A-205ENST00000572428 CLEC19AQ6UXS0 136 aa6.5□□□□□ -1.37
TVP23A-205ENST00000572428 IGKV2D-26A0A0A0MRZ7 120 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 ZNF138P52744 262 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 Q6ZVQ6 151 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 H3BMM0 161 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 C15orf32Q32M92 178 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 UBE2WQ96B02 151 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 CHCHD1Q96BP2 118 aaKnown RBP6.49□□□□□ -1.37
TVP23A-205ENST00000572428 LINC01549A6NIU2 74 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 FAM223BA6NKX1 122 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 HIGD1CA8MV81 97 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 FXYD7P58549 80 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 RNF185Q96GF1 192 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 BAHCC1Q9P281 2608 aa6.49□□□□□ -1.37
TVP23A-205ENST00000572428 G3V318 75 aa6.48□□□□□ -1.37
TVP23A-205ENST00000572428 H0Y9J4 135 aa6.48□□□□□ -1.37
TVP23A-205ENST00000572428 LCA10Q71F78 164 aa6.48□□□□□ -1.37
TVP23A-205ENST00000572428 LINC00643Q86TS7 51 aa6.48□□□□□ -1.37
TVP23A-205ENST00000572428 A8MU10 97 aa6.47□□□□□ -1.37
TVP23A-205ENST00000572428 COX7A2LO14548 114 aa6.47□□□□□ -1.37
TVP23A-205ENST00000572428 ZNF706Q9Y5V0 76 aaPredicted RBP6.47□□□□□ -1.37
TVP23A-205ENST00000572428 LINC00322Q6ZN03 302 aaPredicted RBP6.47□□□□□ -1.37
TVP23A-205ENST00000572428 PHF5AQ7RTV0 110 aaKnown RBP6.47□□□□□ -1.37
TVP23A-205ENST00000572428 MAPKAPK5-AS1Q8N8E1 139 aa6.47□□□□□ -1.37
TVP23A-205ENST00000572428 USMG5Q96IX5 58 aa6.47□□□□□ -1.37
TVP23A-205ENST00000572428 LOC389332A0A1B0GUA5 103 aa6.47□□□□□ -1.37
TVP23A-205ENST00000572428 INAFM1C9JVW0 142 aa6.47□□□□□ -1.37
TVP23A-205ENST00000572428 MRPS36P82909 103 aaKnown RBP6.47□□□□□ -1.37
TVP23A-205ENST00000572428 DEFB104AQ8WTQ1 72 aa6.47□□□□□ -1.37
TVP23A-205ENST00000572428 M0R3E3 92 aa6.46□□□□□ -1.37
TVP23A-205ENST00000572428 TMEM170BQ5T4T1 132 aa6.46□□□□□ -1.37
TVP23A-205ENST00000572428 TRBV7-3A0A075B6L6 115 aa6.46□□□□□ -1.38
TVP23A-205ENST00000572428 UBE2L6O14933 153 aa6.46□□□□□ -1.38
TVP23A-205ENST00000572428 A0A087WZ39 114 aa6.45□□□□□ -1.38
TVP23A-205ENST00000572428 COPS9Q8WXC6 57 aa6.45□□□□□ -1.38
TVP23A-205ENST00000572428 K7EQD1 137 aa6.45□□□□□ -1.38
TVP23A-205ENST00000572428 GPHB5Q86YW7 130 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms