RNA–Protein interactions for RNA: ENST00000572351.1

NPLOC4-208, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-208ENST00000572351 C6orf223Q8N319 242 aa6.38□□□□□ -1.39
NPLOC4-208ENST00000572351 CHCHD1Q96BP2 118 aaKnown RBP6.38□□□□□ -1.39
NPLOC4-208ENST00000572351 RMI2Q96E14 147 aa6.38□□□□□ -1.39
NPLOC4-208ENST00000572351 DNAH1Q9P2D7 4330 aa6.38□□□□□ -1.39
NPLOC4-208ENST00000572351 LINC01546A6NGU7 62 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 LINC01549A6NIU2 74 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 FAM229AH3BQW9 127 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HIST1H2BKO60814 126 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HBDP02042 147 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HIST1H2BJP06899 126 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HIST1H2BOP23527 126 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HIST1H2BBP33778 126 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HIST1H2BDP58876 126 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HIST1H2BCP62807 126 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 REG3AQ06141 175 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 PMCHL1Q16048 86 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HIST2H2BEQ16778 126 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 Q6ZN92 141 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 NFE4Q86UQ8 179 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 ZNF664Q8N3J9 261 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HIST1H2BHQ93079 126 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 URB1-AS1Q96HZ7 61 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 SCGB3A1Q96QR1 104 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HIST1H2BNQ99877 126 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 HIST1H2BMQ99879 126 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 TIMM21Q9BVV7 248 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 CSDC2Q9Y534 153 aaKnown RBP6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 SACSQ9NZJ4 4579 aa6.37□□□□□ -1.39
NPLOC4-208ENST00000572351 IGKV2D-24A0A075B6R9 120 aa6.36□□□□□ -1.39
NPLOC4-208ENST00000572351 PSCAO43653 123 aa6.36□□□□□ -1.39
NPLOC4-208ENST00000572351 SERF1AO75920 110 aa6.36□□□□□ -1.39
NPLOC4-208ENST00000572351 MIAQ16674 131 aa6.36□□□□□ -1.39
NPLOC4-208ENST00000572351 RNASE13Q5GAN3 156 aaKnown RBP6.36□□□□□ -1.39
NPLOC4-208ENST00000572351 PAPPA-AS1Q5QFB9 102 aa6.36□□□□□ -1.39
NPLOC4-208ENST00000572351 Q6ZUT4 128 aa6.36□□□□□ -1.39
NPLOC4-208ENST00000572351 TOMM6Q96B49 74 aa6.36□□□□□ -1.39
NPLOC4-208ENST00000572351 C1orf43Q9BWL3 253 aa6.36□□□□□ -1.39
NPLOC4-208ENST00000572351 TM2D2Q9BX73 214 aa6.36□□□□□ -1.39
NPLOC4-208ENST00000572351 CDC42SE2Q9NRR3 84 aa6.36□□□□□ -1.39
NPLOC4-208ENST00000572351 IGLV10-54A0A075B6I4 117 aa6.35□□□□□ -1.39
NPLOC4-208ENST00000572351 ENHOQ6UWT2 76 aa6.35□□□□□ -1.39
NPLOC4-208ENST00000572351 TEX43Q6ZNM6 134 aa6.35□□□□□ -1.39
NPLOC4-208ENST00000572351 TMEM141Q96I45 108 aa6.35□□□□□ -1.39
NPLOC4-208ENST00000572351 OPRPNQ99935 248 aaPredicted RBP6.35□□□□□ -1.39
NPLOC4-208ENST00000572351 C2orf88Q9BSF0 95 aa6.35□□□□□ -1.39
NPLOC4-208ENST00000572351 PRR34Q9NV39 138 aa6.35□□□□□ -1.39
NPLOC4-208ENST00000572351 PYGO1Q9Y3Y4 419 aa6.35□□□□□ -1.39
NPLOC4-208ENST00000572351 COX11Q9Y6N1 276 aa6.35□□□□□ -1.39
NPLOC4-208ENST00000572351 IGLV4-3A0A075B6K6 122 aa6.34□□□□□ -1.39
NPLOC4-208ENST00000572351 TRAV13-1A0A0B4J241 112 aa6.34□□□□□ -1.39
NPLOC4-208ENST00000572351 TRAV8-4A0A0B4J246 113 aa6.34□□□□□ -1.39
NPLOC4-208ENST00000572351 TMEM238LA0A1B0GVL6 79 aa6.34□□□□□ -1.39
NPLOC4-208ENST00000572351 IFITM10A6NMD0 228 aa6.34□□□□□ -1.39
NPLOC4-208ENST00000572351 NDUFA6P56556 154 aa6.34□□□□□ -1.39
NPLOC4-208ENST00000572351 MRPS36P82909 103 aaKnown RBP6.34□□□□□ -1.39
NPLOC4-208ENST00000572351 SS18Q15532 418 aa6.34□□□□□ -1.39
NPLOC4-208ENST00000572351 ERASQ7Z444 233 aa6.34□□□□□ -1.39
NPLOC4-208ENST00000572351 TIMM17AQ99595 171 aa6.34□□□□□ -1.39
NPLOC4-208ENST00000572351 VCX2Q9H322 139 aa6.34□□□□□ -1.39
NPLOC4-208ENST00000572351 TENM2Q9NT68 2774 aa6.34□□□□□ -1.4
NPLOC4-208ENST00000572351 IGIPA6NJ69 53 aa6.33□□□□□ -1.4
NPLOC4-208ENST00000572351 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.33□□□□□ -1.4
NPLOC4-208ENST00000572351 ATP5LO75964 103 aa6.33□□□□□ -1.4
NPLOC4-208ENST00000572351 NPSP0C0P6 89 aa6.33□□□□□ -1.4
NPLOC4-208ENST00000572351 FAM19A2Q8N3H0 131 aa6.33□□□□□ -1.4
NPLOC4-208ENST00000572351 LYSTQ99698 3801 aa6.33□□□□□ -1.4
NPLOC4-208ENST00000572351 A0A096LNJ9 63 aa6.32□□□□□ -1.4
NPLOC4-208ENST00000572351 LINC00959A0A1B0GUT2 108 aa6.32□□□□□ -1.4
NPLOC4-208ENST00000572351 XCL1P47992 114 aa6.32□□□□□ -1.4
NPLOC4-208ENST00000572351 LINC00310P59036 64 aa6.32□□□□□ -1.4
NPLOC4-208ENST00000572351 CHCHD10Q8WYQ3 142 aaPredicted RBP6.32□□□□□ -1.4
NPLOC4-208ENST00000572351 KMT2CQ8NEZ4 4911 aaKnown RBP6.32□□□□□ -1.4
NPLOC4-208ENST00000572351 GAGE12HA6NDE8 117 aa6.31□□□□□ -1.4
NPLOC4-208ENST00000572351 CCL25O15444 150 aa6.31□□□□□ -1.4
NPLOC4-208ENST00000572351 NUPR1O60356 82 aa6.31□□□□□ -1.4
NPLOC4-208ENST00000572351 LEPROTL1O95214 131 aa6.31□□□□□ -1.4
NPLOC4-208ENST00000572351 S100A6P06703 90 aa6.31□□□□□ -1.4
NPLOC4-208ENST00000572351 PDZD11Q5EBL8 140 aa6.31□□□□□ -1.4
NPLOC4-208ENST00000572351 ZC2HC1BQ5TFG8 222 aa6.31□□□□□ -1.4
NPLOC4-208ENST00000572351 HSPB8Q9UJY1 196 aa6.31□□□□□ -1.4
NPLOC4-208ENST00000572351 RYR2Q92736 4967 aa6.3□□□□□ -1.4
NPLOC4-208ENST00000572351 RTL8CO15255 209 aa6.3□□□□□ -1.4
NPLOC4-208ENST00000572351 PRSS1P07477 247 aa6.3□□□□□ -1.4
NPLOC4-208ENST00000572351 FABP4P15090 132 aa6.3□□□□□ -1.4
NPLOC4-208ENST00000572351 PMVKQ15126 192 aa6.3□□□□□ -1.4
NPLOC4-208ENST00000572351 BAALCQ8WXS3 180 aa6.3□□□□□ -1.4
NPLOC4-208ENST00000572351 HYDINQ4G0P3 5121 aa6.3□□□□□ -1.4
NPLOC4-208ENST00000572351 PRSS29PA6NIE9 313 aa6.29□□□□□ -1.4
NPLOC4-208ENST00000572351 COA6Q5JTJ3 125 aaKnown RBP6.29□□□□□ -1.4
NPLOC4-208ENST00000572351 CD164L2Q6UWJ8 174 aa6.29□□□□□ -1.4
NPLOC4-208ENST00000572351 Q6ZRN7 208 aaPredicted RBP6.29□□□□□ -1.4
NPLOC4-208ENST00000572351 LINC00336Q6ZUF6 198 aa6.29□□□□□ -1.4
NPLOC4-208ENST00000572351 FAM104AQ969W3 186 aa6.29□□□□□ -1.4
NPLOC4-208ENST00000572351 IFI27L1Q96BM0 104 aa6.29□□□□□ -1.4
NPLOC4-208ENST00000572351 AMELXQ99217 191 aa6.29□□□□□ -1.4
NPLOC4-208ENST00000572351 CST9LQ9H4G1 147 aa6.29□□□□□ -1.4
NPLOC4-208ENST00000572351 H0Y8G0 127 aa6.28□□□□□ -1.4
NPLOC4-208ENST00000572351 MALP21145 153 aa6.28□□□□□ -1.4
NPLOC4-208ENST00000572351 S100A2P29034 98 aa6.28□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms