RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 CCL25O15444 150 aa4.16□□□□□ -1.74
SMG6-205ENST00000570659 LYRM1O43325 122 aa4.16□□□□□ -1.74
SMG6-205ENST00000570659 MGPP08493 103 aa4.16□□□□□ -1.74
SMG6-205ENST00000570659 LORP23490 312 aaPredicted RBP4.16□□□□□ -1.74
SMG6-205ENST00000570659 RAB5BP61020 215 aa4.16□□□□□ -1.74
SMG6-205ENST00000570659 KRTAP13-2Q52LG2 175 aa4.16□□□□□ -1.74
SMG6-205ENST00000570659 MRPL52Q86TS9 123 aaKnown RBP4.16□□□□□ -1.74
SMG6-205ENST00000570659 NUP35Q8NFH5 326 aa4.16□□□□□ -1.74
SMG6-205ENST00000570659 VPS25Q9BRG1 176 aa4.16□□□□□ -1.74
SMG6-205ENST00000570659 FAM74A7A6NL05 159 aa4.15□□□□□ -1.75
SMG6-205ENST00000570659 LTAP01374 205 aa4.15□□□□□ -1.75
SMG6-205ENST00000570659 H2AFB1P0C5Y9 115 aa4.15□□□□□ -1.75
SMG6-205ENST00000570659 DDTP30046 118 aa4.15□□□□□ -1.75
SMG6-205ENST00000570659 C5orf47Q569G3 176 aa4.15□□□□□ -1.75
SMG6-205ENST00000570659 PPP1R1CQ8WVI7 109 aa4.15□□□□□ -1.75
SMG6-205ENST00000570659 GEMIN7Q9H840 131 aaKnown RBP4.15□□□□□ -1.75
SMG6-205ENST00000570659 LINC00474Q9P2X8 69 aa4.15□□□□□ -1.75
SMG6-205ENST00000570659 SSPOA2VEC9 5147 aa4.15□□□□□ -1.75
SMG6-205ENST00000570659 LOC107984640A0A0U1RRK4 108 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 LINC00959A0A1B0GUT2 108 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 C5orf52A6NGY3 159 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 MPC2O95563 127 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 PET100P0DJ07 73 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 ATP6V0CP27449 155 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 UBE2D1P51668 147 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 LINC01547P58512 204 aaPredicted RBP4.14□□□□□ -1.75
SMG6-205ENST00000570659 RPL18AQ02543 176 aaKnown RBP4.14□□□□□ -1.75
SMG6-205ENST00000570659 TPRXLQ17RH7 258 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 COX19Q49B96 90 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 TMEM97Q5BJF2 176 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 CLLU1Q5K131 121 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 C10orf25Q5T742 122 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 FAM19A5Q7Z5A7 132 aaPredicted RBP4.14□□□□□ -1.75
SMG6-205ENST00000570659 SCGB1C1Q8TD33 95 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 RPL39LQ96EH5 51 aaKnown RBP4.14□□□□□ -1.75
SMG6-205ENST00000570659 CDIP1Q9H305 208 aa4.14□□□□□ -1.75
SMG6-205ENST00000570659 IGHV1-58A0A0C4DH39 117 aa4.13□□□□□ -1.75
SMG6-205ENST00000570659 A0A1W2PRE2 83 aa4.13□□□□□ -1.75
SMG6-205ENST00000570659 OR5AL1P0C617 328 aa4.13□□□□□ -1.75
SMG6-205ENST00000570659 FGF6P10767 208 aa4.13□□□□□ -1.75
SMG6-205ENST00000570659 CAMPP49913 170 aa4.13□□□□□ -1.75
SMG6-205ENST00000570659 OR5A1Q8NGJ0 315 aa4.13□□□□□ -1.75
SMG6-205ENST00000570659 PGLYRP4Q96LB8 373 aa4.13□□□□□ -1.75
SMG6-205ENST00000570659 CCDC32Q9BV29 185 aa4.13□□□□□ -1.75
SMG6-205ENST00000570659 IGLV7-46A0A075B6I9 117 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 TRAV1-1A0A0B4J248 108 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 TEX46H3BTG2 121 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 APOMO95445 188 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 CXorf1O96002 111 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 IGLC6P0CF74 106 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 NTF3P20783 257 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 FOXA3P55318 350 aaPredicted RBP4.12□□□□□ -1.75
SMG6-205ENST00000570659 KRTAP10-6P60371 365 aaPredicted RBP4.12□□□□□ -1.75
SMG6-205ENST00000570659 EIF5AP63241 154 aaKnown RBP4.12□□□□□ -1.75
SMG6-205ENST00000570659 RNF151Q2KHN1 245 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 SPANXN1Q5VSR9 72 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 BOD1L2Q8IYS8 172 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 MLST8Q9BVC4 326 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 MED9Q9NWA0 146 aa4.12□□□□□ -1.75
SMG6-205ENST00000570659 C1orf196B1AJZ1 125 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 INMT-MINDY4F8WBC2 141 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 BCL2L11O43521 198 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 S100A2P29034 98 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 RPL13AP40429 203 aaKnown RBP4.11□□□□□ -1.75
SMG6-205ENST00000570659 HERV-K104P63124 156 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 VAMP3Q15836 100 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 RNASE13Q5GAN3 156 aaKnown RBP4.11□□□□□ -1.75
SMG6-205ENST00000570659 RNASEKQ6P5S7 137 aaKnown RBP4.11□□□□□ -1.75
SMG6-205ENST00000570659 RASL11AQ6T310 242 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 TCTE3Q8IZS6 198 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 C9orf62Q8N4C0 152 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 GATD1Q8NB37 220 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 TMEM167BQ9NRX6 74 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 ZFP30Q9Y2G7 519 aa4.11□□□□□ -1.75
SMG6-205ENST00000570659 USH2AO75445 5202 aa4.1□□□□□ -1.75
SMG6-205ENST00000570659 M0R143 59 aa4.1□□□□□ -1.75
SMG6-205ENST00000570659 UBE2L6O14933 153 aa4.1□□□□□ -1.75
SMG6-205ENST00000570659 SS18Q15532 418 aa4.1□□□□□ -1.75
SMG6-205ENST00000570659 ASB16-AS1Q495Z4 193 aa4.1□□□□□ -1.75
SMG6-205ENST00000570659 Q5BKY6 102 aa4.1□□□□□ -1.75
SMG6-205ENST00000570659 AP1S3Q96PC3 154 aa4.1□□□□□ -1.75
SMG6-205ENST00000570659 SCO2A0A1W2PP80 73 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 C20orf202A1L168 122 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 ZNF561-AS1K7EIQ3 104 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 K7ERU9 68 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 SSNA1O43805 119 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 UPK1BO75841 260 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 CXCL1P09341 107 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 AKR1C3P42330 323 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 IFITM3Q01628 133 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 C9orf129Q5T035 196 aaKnown RBP4.09□□□□□ -1.75
SMG6-205ENST00000570659 C5orf38Q86SI9 138 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 HIST1H2BAQ96A08 127 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 FMC1Q96HJ9 113 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 CAMK2N2Q96S95 79 aa4.09□□□□□ -1.75
SMG6-205ENST00000570659 RNASE7Q9H1E1 156 aaKnown RBP4.09□□□□□ -1.75
SMG6-205ENST00000570659 CARHSP1Q9Y2V2 147 aaKnown RBP4.09□□□□□ -1.75
SMG6-205ENST00000570659 M0QXV9 152 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 TSHBP01222 138 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 NPSP0C0P6 89 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms