RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 C3orf56Q8N813 242 aa11.19□□□□□ -0.62
USP43-202ENST00000570475 POM121L12Q8N7R1 296 aa11.19□□□□□ -0.62
USP43-202ENST00000570475 SS18L2Q9UHA2 77 aa11.19□□□□□ -0.62
USP43-202ENST00000570475 FLNAP21333 2647 aaKnown RBP11.19□□□□□ -0.62
USP43-202ENST00000570475 KLK9Q2XQG4 91 aa11.18□□□□□ -0.62
USP43-202ENST00000570475 ATP6V0E2Q8NHE4 81 aa11.18□□□□□ -0.62
USP43-202ENST00000570475 GAGE7O76087 117 aa11.18□□□□□ -0.62
USP43-202ENST00000570475 GAGE12FP0CL80 117 aa11.18□□□□□ -0.62
USP43-202ENST00000570475 GAGE12GP0CL81 117 aa11.18□□□□□ -0.62
USP43-202ENST00000570475 GAGE12IP0CL82 117 aa11.18□□□□□ -0.62
USP43-202ENST00000570475 RPL32P62910 135 aaKnown RBP11.18□□□□□ -0.62
USP43-202ENST00000570475 TRAV4A0A0B4J268 109 aa11.17□□□□□ -0.62
USP43-202ENST00000570475 PRORYQ9H606 182 aa11.17□□□□□ -0.62
USP43-202ENST00000570475 NOP10Q9NPE3 64 aaKnown RBP11.17□□□□□ -0.62
USP43-202ENST00000570475 NBEAL2Q6ZNJ1 2754 aa11.17□□□□□ -0.62
USP43-202ENST00000570475 RBMY1BA6NDE4 496 aaKnown RBP11.17□□□□□ -0.62
USP43-202ENST00000570475 RBMY1EA6NEQ0 496 aaKnown RBP11.17□□□□□ -0.62
USP43-202ENST00000570475 RBMY1DP0C7P1 496 aaKnown RBP11.17□□□□□ -0.62
USP43-202ENST00000570475 GATA3P23771 443 aa11.17□□□□□ -0.62
USP43-202ENST00000570475 RPL36AP83881 106 aaKnown RBP11.17□□□□□ -0.62
USP43-202ENST00000570475 OR13C6PQ8NH95 151 aa11.17□□□□□ -0.62
USP43-202ENST00000570475 RPL36ALQ969Q0 106 aaKnown RBP11.17□□□□□ -0.62
USP43-202ENST00000570475 AMELXQ99217 191 aa11.17□□□□□ -0.62
USP43-202ENST00000570475 VSIG2Q96IQ7 327 aa11.17□□□□□ -0.62
USP43-202ENST00000570475 Q96MF0 132 aa11.17□□□□□ -0.62
USP43-202ENST00000570475 MAP6D1Q9H9H5 199 aa11.17□□□□□ -0.62
USP43-202ENST00000570475 RS1O15537 224 aa11.15□□□□□ -0.62
USP43-202ENST00000570475 KRTAP10-9P60411 292 aa11.15□□□□□ -0.62
USP43-202ENST00000570475 Q6ZTI0 123 aa11.15□□□□□ -0.62
USP43-202ENST00000570475 YAE1D1Q9NRH1 226 aa11.15□□□□□ -0.62
USP43-202ENST00000570475 EIF4EBP3O60516 100 aaPredicted RBP11.15□□□□□ -0.62
USP43-202ENST00000570475 ZNF702PQ9H963 129 aa11.15□□□□□ -0.62
USP43-202ENST00000570475 A0A0B4J2C4 111 aa11.15□□□□□ -0.62
USP43-202ENST00000570475 CRLF1O75462 422 aa11.15□□□□□ -0.62
USP43-202ENST00000570475 GAGE6Q13070 117 aa11.14□□□□□ -0.63
USP43-202ENST00000570475 PFN2P35080 140 aa11.14□□□□□ -0.63
USP43-202ENST00000570475 CHCHD5Q9BSY4 110 aa11.14□□□□□ -0.63
USP43-202ENST00000570475 TRGV4A0A0C4DH28 118 aa11.14□□□□□ -0.63
USP43-202ENST00000570475 LINC00158P58513 81 aa11.14□□□□□ -0.63
USP43-202ENST00000570475 DSCR9P59020 149 aa11.14□□□□□ -0.63
USP43-202ENST00000570475 COX6A2Q02221 97 aa11.14□□□□□ -0.63
USP43-202ENST00000570475 WFDC10AQ9H1F0 79 aa11.14□□□□□ -0.63
USP43-202ENST00000570475 UBE2D4Q9Y2X8 147 aa11.14□□□□□ -0.63
USP43-202ENST00000570475 MIAQ16674 131 aa11.13□□□□□ -0.63
USP43-202ENST00000570475 SPANXA1Q9NS26 97 aa11.13□□□□□ -0.63
USP43-202ENST00000570475 TRBV10-2A0A0K0K1G8 114 aa11.13□□□□□ -0.63
USP43-202ENST00000570475 DEFB130BP0DP73 79 aa11.13□□□□□ -0.63
USP43-202ENST00000570475 DEFB130AP0DP74 79 aa11.13□□□□□ -0.63
USP43-202ENST00000570475 ODF3Q96PU9 254 aa11.13□□□□□ -0.63
USP43-202ENST00000570475 LINC00694P0DN24 101 aa11.13□□□□□ -0.63
USP43-202ENST00000570475 TMEM101Q96IK0 257 aa11.13□□□□□ -0.63
USP43-202ENST00000570475 A0A096LPF7 62 aa11.12□□□□□ -0.63
USP43-202ENST00000570475 RNASE1P07998 156 aaKnown RBP11.12□□□□□ -0.63
USP43-202ENST00000570475 PIK3CD-AS1Q5SR53 167 aa11.12□□□□□ -0.63
USP43-202ENST00000570475 MRPS36P82909 103 aaKnown RBP11.12□□□□□ -0.63
USP43-202ENST00000570475 CHCHD7Q9BUK0 85 aa11.12□□□□□ -0.63
USP43-202ENST00000570475 PLA2G2AP14555 144 aa11.11□□□□□ -0.63
USP43-202ENST00000570475 CLPSL2Q6UWE3 100 aa11.11□□□□□ -0.63
USP43-202ENST00000570475 SVIPQ8NHG7 77 aa11.11□□□□□ -0.63
USP43-202ENST00000570475 ITPR3Q14573 2671 aa11.11□□□□□ -0.63
USP43-202ENST00000570475 GCN1Q92616 2671 aaKnown RBP11.11□□□□□ -0.63
USP43-202ENST00000570475 TINCRA0A1B0GVN0 87 aa11.1□□□□□ -0.63
USP43-202ENST00000570475 H7C423 109 aa11.1□□□□□ -0.63
USP43-202ENST00000570475 HIST2H2BCQ6DN03 193 aa11.1□□□□□ -0.63
USP43-202ENST00000570475 Q9HAA7 133 aa11.1□□□□□ -0.63
USP43-202ENST00000570475 LOC100131303A0A0U1RQF7 123 aa11.09□□□□□ -0.63
USP43-202ENST00000570475 Q6YL49 198 aa11.09□□□□□ -0.63
USP43-202ENST00000570475 DEFB114Q30KQ6 69 aa11.09□□□□□ -0.63
USP43-202ENST00000570475 TMEM89A2RUT3 159 aa11.09□□□□□ -0.63
USP43-202ENST00000570475 C5orf38Q86SI9 138 aa11.09□□□□□ -0.63
USP43-202ENST00000570475 NIPBLQ6KC79 2804 aaeCLIP11.08□□□□□ -0.64
USP43-202ENST00000570475 IFITM1P13164 125 aa11.08□□□□□ -0.64
USP43-202ENST00000570475 PYGO1Q9Y3Y4 419 aa11.08□□□□□ -0.64
USP43-202ENST00000570475 HERVK_113P63121 156 aa11.08□□□□□ -0.64
USP43-202ENST00000570475 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.08□□□□□ -0.64
USP43-202ENST00000570475 TRBV30A0A0K0K1B3 111 aa11.07□□□□□ -0.64
USP43-202ENST00000570475 DNAL4O96015 105 aa11.07□□□□□ -0.64
USP43-202ENST00000570475 IGHV4-31P0DP07 118 aa11.07□□□□□ -0.64
USP43-202ENST00000570475 GAGE2AQ6NT46 116 aa11.07□□□□□ -0.64
USP43-202ENST00000570475 PAX4O43316 350 aa11.06□□□□□ -0.64
USP43-202ENST00000570475 BRI3O95415 125 aa11.06□□□□□ -0.64
USP43-202ENST00000570475 LINC00308Q8TCZ7 52 aa11.06□□□□□ -0.64
USP43-202ENST00000570475 J3QLI3 93 aa11.06□□□□□ -0.64
USP43-202ENST00000570475 CCL24O00175 119 aa11.06□□□□□ -0.64
USP43-202ENST00000570475 LINC00242Q5T6M2 205 aa11.05□□□□□ -0.64
USP43-202ENST00000570475 TMEM243Q9BU79 118 aa11.05□□□□□ -0.64
USP43-202ENST00000570475 CRPP02741 224 aa11.04□□□□□ -0.64
USP43-202ENST00000570475 ODF3L2Q3SX64 289 aa11.04□□□□□ -0.64
USP43-202ENST00000570475 BAALC-AS2P0C853 105 aa11.04□□□□□ -0.64
USP43-202ENST00000570475 CITED2Q99967 270 aaPredicted RBP11.04□□□□□ -0.64
USP43-202ENST00000570475 ESM1Q9NQ30 184 aa11.04□□□□□ -0.64
USP43-202ENST00000570475 K7EQD1 137 aa11.04□□□□□ -0.64
USP43-202ENST00000570475 NDUFV3P56181 108 aaKnown RBP11.04□□□□□ -0.64
USP43-202ENST00000570475 LITAFQ99732 161 aa11.03□□□□□ -0.64
USP43-202ENST00000570475 CCDC179H3BU77 68 aa11.03□□□□□ -0.64
USP43-202ENST00000570475 Q8N2B8 174 aa11.02□□□□□ -0.64
USP43-202ENST00000570475 MIR7-3HGQ8N6C7 128 aa11.02□□□□□ -0.64
USP43-202ENST00000570475 ATP5G1P05496 136 aa11.02□□□□□ -0.65
USP43-202ENST00000570475 XCL1P47992 114 aa11.01□□□□□ -0.65
USP43-202ENST00000570475 C6orf226Q5I0X4 101 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms