RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 HSPG2P98160 4391 aa10.85□□□□□ -0.67
USB1-215ENST00000569252 C1orf134Q5TEV5 83 aa10.84□□□□□ -0.67
USB1-215ENST00000569252 MRPL52Q86TS9 123 aaKnown RBP10.84□□□□□ -0.67
USB1-215ENST00000569252 LINC00269Q8N2A0 174 aa10.84□□□□□ -0.67
USB1-215ENST00000569252 UBE2WQ96B02 151 aa10.84□□□□□ -0.67
USB1-215ENST00000569252 CHCHD1Q96BP2 118 aaKnown RBP10.84□□□□□ -0.67
USB1-215ENST00000569252 RMI2Q96E14 147 aa10.84□□□□□ -0.67
USB1-215ENST00000569252 SPANXA1Q9NS26 97 aa10.84□□□□□ -0.67
USB1-215ENST00000569252 LINC01546A6NGU7 62 aa10.83□□□□□ -0.68
USB1-215ENST00000569252 RPL39P62891 51 aaKnown RBP10.83□□□□□ -0.68
USB1-215ENST00000569252 C2orf66Q6UXQ4 117 aa10.83□□□□□ -0.68
USB1-215ENST00000569252 Q8N3U1 123 aa10.83□□□□□ -0.68
USB1-215ENST00000569252 TIMM21Q9BVV7 248 aa10.83□□□□□ -0.68
USB1-215ENST00000569252 UBE2D4Q9Y2X8 147 aa10.83□□□□□ -0.68
USB1-215ENST00000569252 CSDC2Q9Y534 153 aaKnown RBP10.83□□□□□ -0.68
USB1-215ENST00000569252 IGLV4-60A0A075B6I1 120 aa10.82□□□□□ -0.68
USB1-215ENST00000569252 Q6ZR54 194 aa10.82□□□□□ -0.68
USB1-215ENST00000569252 C6orf223Q8N319 242 aa10.82□□□□□ -0.68
USB1-215ENST00000569252 ZNF664Q8N3J9 261 aa10.82□□□□□ -0.68
USB1-215ENST00000569252 TM2D2Q9BX73 214 aa10.82□□□□□ -0.68
USB1-215ENST00000569252 Q9HAA7 133 aa10.82□□□□□ -0.68
USB1-215ENST00000569252 HSBP1O75506 76 aa10.81□□□□□ -0.68
USB1-215ENST00000569252 REG3AQ06141 175 aa10.81□□□□□ -0.68
USB1-215ENST00000569252 PAPPA-AS1Q5QFB9 102 aa10.81□□□□□ -0.68
USB1-215ENST00000569252 Q6ZN92 141 aa10.81□□□□□ -0.68
USB1-215ENST00000569252 SCGB3A1Q96QR1 104 aa10.81□□□□□ -0.68
USB1-215ENST00000569252 COX11Q9Y6N1 276 aa10.81□□□□□ -0.68
USB1-215ENST00000569252 IGKV3OR2-268A0A0C4DH90 116 aa10.8□□□□□ -0.68
USB1-215ENST00000569252 PSCAO43653 123 aa10.8□□□□□ -0.68
USB1-215ENST00000569252 MIAQ16674 131 aa10.8□□□□□ -0.68
USB1-215ENST00000569252 TOMM6Q96B49 74 aa10.8□□□□□ -0.68
USB1-215ENST00000569252 CDC42SE2Q9NRR3 84 aa10.8□□□□□ -0.68
USB1-215ENST00000569252 PYGO1Q9Y3Y4 419 aa10.8□□□□□ -0.68
USB1-215ENST00000569252 TRAV8-4A0A0B4J246 113 aa10.79□□□□□ -0.68
USB1-215ENST00000569252 RTL8CO15255 209 aa10.79□□□□□ -0.68
USB1-215ENST00000569252 HBDP02042 147 aa10.79□□□□□ -0.68
USB1-215ENST00000569252 CLPSL2Q6UWE3 100 aa10.79□□□□□ -0.68
USB1-215ENST00000569252 TMEM141Q96I45 108 aa10.79□□□□□ -0.68
USB1-215ENST00000569252 C1orf43Q9BWL3 253 aa10.79□□□□□ -0.68
USB1-215ENST00000569252 IGKV2D-24A0A075B6R9 120 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 HIST1H2BKO60814 126 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 HIST1H2BJP06899 126 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 NPSP0C0P6 89 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 HIST1H2BOP23527 126 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 HIST1H2BBP33778 126 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 HIST1H2BDP58876 126 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 HIST1H2BCP62807 126 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 SS18Q15532 418 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 HIST2H2BEQ16778 126 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.78□□□□□ -0.68
USB1-215ENST00000569252 ENHOQ6UWT2 76 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 ERASQ7Z444 233 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 HIST1H2BHQ93079 126 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 HIST1H2BNQ99877 126 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 HIST1H2BMQ99879 126 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 KRTAP1-5Q9BYS1 174 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 VCX2Q9H322 139 aa10.78□□□□□ -0.68
USB1-215ENST00000569252 MRPS36P82909 103 aaKnown RBP10.77□□□□□ -0.69
USB1-215ENST00000569252 C2orf88Q9BSF0 95 aa10.77□□□□□ -0.69
USB1-215ENST00000569252 PRR34Q9NV39 138 aa10.77□□□□□ -0.69
USB1-215ENST00000569252 PRSS29PA6NIE9 313 aa10.76□□□□□ -0.69
USB1-215ENST00000569252 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.76□□□□□ -0.69
USB1-215ENST00000569252 CCL25O15444 150 aa10.76□□□□□ -0.69
USB1-215ENST00000569252 SERF1AO75920 110 aa10.76□□□□□ -0.69
USB1-215ENST00000569252 TEX43Q6ZNM6 134 aa10.76□□□□□ -0.69
USB1-215ENST00000569252 URB1-AS1Q96HZ7 61 aa10.76□□□□□ -0.69
USB1-215ENST00000569252 TIMM17AQ99595 171 aa10.76□□□□□ -0.69
USB1-215ENST00000569252 ATP5LO75964 103 aa10.75□□□□□ -0.69
USB1-215ENST00000569252 NDUFA6P56556 154 aa10.75□□□□□ -0.69
USB1-215ENST00000569252 PMCHL1Q16048 86 aa10.75□□□□□ -0.69
USB1-215ENST00000569252 LRP1BQ9NZR2 4599 aa10.75□□□□□ -0.69
USB1-215ENST00000569252 IGLV4-3A0A075B6K6 122 aa10.74□□□□□ -0.69
USB1-215ENST00000569252 IGIPA6NJ69 53 aa10.74□□□□□ -0.69
USB1-215ENST00000569252 IFITM10A6NMD0 228 aa10.74□□□□□ -0.69
USB1-215ENST00000569252 RNASE13Q5GAN3 156 aaKnown RBP10.74□□□□□ -0.69
USB1-215ENST00000569252 Q6ZUT4 128 aa10.74□□□□□ -0.69
USB1-215ENST00000569252 OPRPNQ99935 248 aaPredicted RBP10.74□□□□□ -0.69
USB1-215ENST00000569252 IGLV10-54A0A075B6I4 117 aa10.73□□□□□ -0.69
USB1-215ENST00000569252 TRAV13-1A0A0B4J241 112 aa10.73□□□□□ -0.69
USB1-215ENST00000569252 LINC00959A0A1B0GUT2 108 aa10.73□□□□□ -0.69
USB1-215ENST00000569252 EREGO14944 169 aa10.72□□□□□ -0.69
USB1-215ENST00000569252 S100A6P06703 90 aa10.72□□□□□ -0.69
USB1-215ENST00000569252 LINC00336Q6ZUF6 198 aa10.72□□□□□ -0.69
USB1-215ENST00000569252 FAM19A2Q8N3H0 131 aa10.72□□□□□ -0.69
USB1-215ENST00000569252 LEPROTL1O95214 131 aa10.71□□□□□ -0.69
USB1-215ENST00000569252 HSPB8Q9UJY1 196 aa10.71□□□□□ -0.69
USB1-215ENST00000569252 PRSS1P07477 247 aa10.7□□□□□ -0.7
USB1-215ENST00000569252 XCL1P47992 114 aa10.7□□□□□ -0.7
USB1-215ENST00000569252 PDZD11Q5EBL8 140 aa10.7□□□□□ -0.7
USB1-215ENST00000569252 CHCHD10Q8WYQ3 142 aaPredicted RBP10.7□□□□□ -0.7
USB1-215ENST00000569252 APOBP04114 4563 aaKnown RBP10.69□□□□□ -0.7
USB1-215ENST00000569252 GAGE12HA6NDE8 117 aa10.69□□□□□ -0.7
USB1-215ENST00000569252 SEC11AP67812 179 aa10.69□□□□□ -0.7
USB1-215ENST00000569252 PMVKQ15126 192 aa10.69□□□□□ -0.7
USB1-215ENST00000569252 AMELXQ99217 191 aa10.69□□□□□ -0.7
USB1-215ENST00000569252 A0A096LNJ9 63 aa10.68□□□□□ -0.7
USB1-215ENST00000569252 NUPR1O60356 82 aa10.68□□□□□ -0.7
USB1-215ENST00000569252 CD164L2Q6UWJ8 174 aa10.68□□□□□ -0.7
USB1-215ENST00000569252 IFI27L1Q96BM0 104 aa10.68□□□□□ -0.7
USB1-215ENST00000569252 FABP4P15090 132 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms