RNA–Protein interactions for RNA: ENST00000568993.5

SNX20-204, Transcript of sorting nexin 20, humanhuman

TSL 1 (best)

Gene SNX20, Length 2,003 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-204ENST00000568993 SMIM20Q8N5G0 67 aa11.02□□□□□ -0.65
SNX20-204ENST00000568993 TRAV8-6A0A0B4J262 113 aa11.01□□□□□ -0.65
SNX20-204ENST00000568993 TRGV4A0A0C4DH28 118 aa11.01□□□□□ -0.65
SNX20-204ENST00000568993 EMP1P54849 157 aa11.01□□□□□ -0.65
SNX20-204ENST00000568993 TTTY13Q9BZ97 58 aa11.01□□□□□ -0.65
SNX20-204ENST00000568993 FBN1P35555 2871 aaKnown RBP11.01□□□□□ -0.65
SNX20-204ENST00000568993 GAGE10A6NGK3 116 aa11.01□□□□□ -0.65
SNX20-204ENST00000568993 LYRM9A8MSI8 78 aa11.01□□□□□ -0.65
SNX20-204ENST00000568993 GAGE5Q13069 117 aa11.01□□□□□ -0.65
SNX20-204ENST00000568993 GAGE6Q13070 117 aa11.01□□□□□ -0.65
SNX20-204ENST00000568993 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11□□□□□ -0.65
SNX20-204ENST00000568993 IGKV2-29A2NJV5 120 aaPredicted RBP11□□□□□ -0.65
SNX20-204ENST00000568993 GAGE12JA6NER3 117 aa11□□□□□ -0.65
SNX20-204ENST00000568993 IGHV4-30-4P0DP06 118 aa11□□□□□ -0.65
SNX20-204ENST00000568993 MRPS36P82909 103 aaKnown RBP11□□□□□ -0.65
SNX20-204ENST00000568993 GAGE4Q13068 117 aa11□□□□□ -0.65
SNX20-204ENST00000568993 DEFB135Q30KP9 77 aa11□□□□□ -0.65
SNX20-204ENST00000568993 GAGE13Q4V321 117 aa11□□□□□ -0.65
SNX20-204ENST00000568993 C5orf47Q569G3 176 aa11□□□□□ -0.65
SNX20-204ENST00000568993 NTM-AS1Q6ZSK4 140 aa10.99□□□□□ -0.65
SNX20-204ENST00000568993 MAPKAPK5-AS1Q8N8E1 139 aa10.99□□□□□ -0.65
SNX20-204ENST00000568993 TRBV25-1A0A075B6N4 114 aa10.99□□□□□ -0.65
SNX20-204ENST00000568993 HERVK_113P61574 105 aa10.99□□□□□ -0.65
SNX20-204ENST00000568993 EGFEM1PQ0D2K5 195 aa10.99□□□□□ -0.65
SNX20-204ENST00000568993 CEMP1Q6PRD7 247 aaPredicted RBP10.99□□□□□ -0.65
SNX20-204ENST00000568993 PRADC1Q9BSG0 188 aa10.99□□□□□ -0.65
SNX20-204ENST00000568993 ERG28Q9UKR5 140 aa10.99□□□□□ -0.65
SNX20-204ENST00000568993 LINC00694P0DN24 101 aa10.98□□□□□ -0.65
SNX20-204ENST00000568993 DEFB130BP0DP73 79 aa10.98□□□□□ -0.65
SNX20-204ENST00000568993 DEFB130AP0DP74 79 aa10.98□□□□□ -0.65
SNX20-204ENST00000568993 OXLD1Q5BKU9 147 aa10.98□□□□□ -0.65
SNX20-204ENST00000568993 SBSPONQ8IVN8 264 aa10.98□□□□□ -0.65
SNX20-204ENST00000568993 CHAC1Q9BUX1 264 aa10.98□□□□□ -0.65
SNX20-204ENST00000568993 CSDC2Q9Y534 153 aaKnown RBP10.98□□□□□ -0.65
SNX20-204ENST00000568993 STAB1Q9NY15 2570 aa10.98□□□□□ -0.65
SNX20-204ENST00000568993 MIFP14174 115 aa10.97□□□□□ -0.65
SNX20-204ENST00000568993 RNF183Q96D59 192 aa10.97□□□□□ -0.65
SNX20-204ENST00000568993 NBEAL2Q6ZNJ1 2754 aa10.97□□□□□ -0.65
SNX20-204ENST00000568993 TMEM170BQ5T4T1 132 aa10.97□□□□□ -0.65
SNX20-204ENST00000568993 A0A0J9YXV3 536 aa10.96□□□□□ -0.65
SNX20-204ENST00000568993 LOC100131303A0A0U1RQF7 123 aa10.96□□□□□ -0.65
SNX20-204ENST00000568993 MYMXA0A1B0GTQ4 84 aa10.96□□□□□ -0.65
SNX20-204ENST00000568993 A8MZ25 164 aa10.96□□□□□ -0.65
SNX20-204ENST00000568993 M0QXV9 152 aa10.96□□□□□ -0.65
SNX20-204ENST00000568993 KRTAP10-11P60412 298 aa10.96□□□□□ -0.65
SNX20-204ENST00000568993 FAM222AQ5U5X8 452 aa10.96□□□□□ -0.65
SNX20-204ENST00000568993 IGHV4-28A0A0C4DH34 117 aa10.96□□□□□ -0.66
SNX20-204ENST00000568993 ZNF22P17026 224 aaPredicted RBP10.96□□□□□ -0.66
SNX20-204ENST00000568993 SEC11AP67812 179 aa10.96□□□□□ -0.66
SNX20-204ENST00000568993 Q8NAQ8 132 aa10.96□□□□□ -0.66
SNX20-204ENST00000568993 TMEM223A0PJW6 202 aa10.95□□□□□ -0.66
SNX20-204ENST00000568993 Q6ZUT4 128 aa10.95□□□□□ -0.66
SNX20-204ENST00000568993 H7C423 109 aa10.94□□□□□ -0.66
SNX20-204ENST00000568993 K7EP34 96 aa10.94□□□□□ -0.66
SNX20-204ENST00000568993 TINCRA0A1B0GVN0 87 aa10.94□□□□□ -0.66
SNX20-204ENST00000568993 DGAT2L7PQ6IED9 249 aa10.94□□□□□ -0.66
SNX20-204ENST00000568993 CMYA5Q8N3K9 4069 aa10.93□□□□□ -0.66
SNX20-204ENST00000568993 TMEM243Q9BU79 118 aa10.93□□□□□ -0.66
SNX20-204ENST00000568993 TAL2Q16559 108 aa10.92□□□□□ -0.66
SNX20-204ENST00000568993 PRO0255Q9UI72 69 aa10.92□□□□□ -0.66
SNX20-204ENST00000568993 UBE2D1P51668 147 aa10.92□□□□□ -0.66
SNX20-204ENST00000568993 RNASE13Q5GAN3 156 aaKnown RBP10.92□□□□□ -0.66
SNX20-204ENST00000568993 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
SNX20-204ENST00000568993 MAST4O15021 2626 aa10.91□□□□□ -0.66
SNX20-204ENST00000568993 LEPROTO15243 131 aa10.91□□□□□ -0.66
SNX20-204ENST00000568993 FAM19A3Q7Z5A8 133 aa10.91□□□□□ -0.66
SNX20-204ENST00000568993 TEX48A0A1B0GUV7 120 aa10.91□□□□□ -0.66
SNX20-204ENST00000568993 ZNF815PA8K554 130 aa10.91□□□□□ -0.66
SNX20-204ENST00000568993 TIRAPP58753 221 aa10.91□□□□□ -0.66
SNX20-204ENST00000568993 TM2D2Q9BX73 214 aa10.91□□□□□ -0.66
SNX20-204ENST00000568993 TRBV6-8A0A0A6YYG3 113 aa10.9□□□□□ -0.66
SNX20-204ENST00000568993 J3QQQ9 107 aa10.9□□□□□ -0.66
SNX20-204ENST00000568993 TSPEAR-AS2P59090 65 aa10.9□□□□□ -0.66
SNX20-204ENST00000568993 CDC42SE2Q9NRR3 84 aa10.9□□□□□ -0.66
SNX20-204ENST00000568993 A6NDN8 102 aa10.89□□□□□ -0.67
SNX20-204ENST00000568993 B5MCH6 92 aa10.89□□□□□ -0.67
SNX20-204ENST00000568993 J3QR89 54 aa10.89□□□□□ -0.67
SNX20-204ENST00000568993 DEFB4AO15263 64 aa10.89□□□□□ -0.67
SNX20-204ENST00000568993 PKD1L1Q8TDX9 2849 aa10.89□□□□□ -0.67
SNX20-204ENST00000568993 IGLV5-45A0A087WSX0 123 aa10.89□□□□□ -0.67
SNX20-204ENST00000568993 UBE2L6O14933 153 aa10.89□□□□□ -0.67
SNX20-204ENST00000568993 SPART-AS1P0CW21 52 aa10.89□□□□□ -0.67
SNX20-204ENST00000568993 GYPEP15421 78 aa10.89□□□□□ -0.67
SNX20-204ENST00000568993 DAD1P61803 113 aa10.89□□□□□ -0.67
SNX20-204ENST00000568993 PLEKHB2Q96CS7 222 aa10.89□□□□□ -0.67
SNX20-204ENST00000568993 COL6A5A8TX70 2615 aa10.88□□□□□ -0.67
SNX20-204ENST00000568993 CEND1Q8N111 149 aa10.88□□□□□ -0.67
SNX20-204ENST00000568993 ATP6V0E2Q8NHE4 81 aa10.88□□□□□ -0.67
SNX20-204ENST00000568993 TMEM101Q96IK0 257 aa10.87□□□□□ -0.67
SNX20-204ENST00000568993 CELA1Q9UNI1 258 aa10.87□□□□□ -0.67
SNX20-204ENST00000568993 LGALS3P17931 250 aaKnown RBP10.87□□□□□ -0.67
SNX20-204ENST00000568993 DNAH3Q8TD57 4116 aa10.86□□□□□ -0.67
SNX20-204ENST00000568993 C9orf118A6NHY6 69 aa10.86□□□□□ -0.67
SNX20-204ENST00000568993 PAX4O43316 350 aa10.86□□□□□ -0.67
SNX20-204ENST00000568993 ATP5G1P05496 136 aa10.86□□□□□ -0.67
SNX20-204ENST00000568993 GCSHP23434 173 aa10.86□□□□□ -0.67
SNX20-204ENST00000568993 RPL24P83731 157 aaKnown RBP10.86□□□□□ -0.67
SNX20-204ENST00000568993 IGHV1-58A0A0C4DH39 117 aa10.85□□□□□ -0.67
SNX20-204ENST00000568993 FXYD2P54710 66 aa10.85□□□□□ -0.67
SNX20-204ENST00000568993 HERVK_113P63121 156 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms