RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 CACNG7P62955 275 aa3.06□□□□□ -1.92
HERPUD1-213ENST00000568358 RPL19P84098 196 aaKnown RBP3.06□□□□□ -1.92
HERPUD1-213ENST00000568358 WFDC2Q14508 124 aa3.06□□□□□ -1.92
HERPUD1-213ENST00000568358 FLG2Q5D862 2391 aaPredicted RBP3.06□□□□□ -1.92
HERPUD1-213ENST00000568358 MRPL52Q86TS9 123 aaKnown RBP3.06□□□□□ -1.92
HERPUD1-213ENST00000568358 FER1L6-AS1Q8NA97 138 aa3.06□□□□□ -1.92
HERPUD1-213ENST00000568358 OR10AG1Q8NH19 301 aa3.06□□□□□ -1.92
HERPUD1-213ENST00000568358 DNAJC30Q96LL9 226 aa3.06□□□□□ -1.92
HERPUD1-213ENST00000568358 CHAC1Q9BUX1 264 aa3.06□□□□□ -1.92
HERPUD1-213ENST00000568358 KRTAP3-1Q9BYR8 98 aa3.06□□□□□ -1.92
HERPUD1-213ENST00000568358 GNG13Q9P2W3 67 aa3.06□□□□□ -1.92
HERPUD1-213ENST00000568358 IGHV1-24A0A0C4DH33 117 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 IGLV5-39A0A0G2JS06 123 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 A6NDN8 102 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 G3V3Q6 166 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 PDE6DO43924 150 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 P01737 135 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 TRGC1P0CF51 173 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 RAB4AP20338 218 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 MPV17L2Q567V2 206 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 ENHOQ6UWT2 76 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 Q6ZSA8 131 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 SMIM15Q7Z3B0 74 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 CBLN2Q8IUK8 224 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 LINC00269Q8N2A0 174 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 OR2D3Q8NGH3 330 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 SMIM12Q96EX1 92 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 PACRGQ96M98 296 aaPredicted RBP3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 MED9Q9NWA0 146 aa3.05□□□□□ -1.92
HERPUD1-213ENST00000568358 DMBT1Q9UGM3 2413 aaPredicted RBP3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 DNAH5Q8TE73 4624 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 TRAV8-4A0A0B4J246 113 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 TRAV1-1A0A0B4J248 108 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 IGLV2-8P01709 118 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 GZMBP10144 247 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 NTF3P20783 257 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 RBX1P62877 108 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 CCL20P78556 96 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 MEF2BQ02080 365 aaPredicted RBP3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 REG3AQ06141 175 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 TWIST1Q15672 202 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 IQCJQ1A5X6 159 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 CENPWQ5EE01 88 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 RASL11AQ6T310 242 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 SCXQ7RTU7 201 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 CIRBP-AS1Q8TBR5 109 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 TMEM243Q9BU79 118 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 DPH3P1Q9H4G8 78 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 VAX2Q9UIW0 290 aa3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 APOBP04114 4563 aaKnown RBP3.04□□□□□ -1.92
HERPUD1-213ENST00000568358 A0A1B0GUV1 79 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 KRTAP29-1A8MX34 341 aaPredicted RBP3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 TMEM238C9JI98 176 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 M0QY20 66 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 PRSS1P07477 247 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 SULT1A2P50226 295 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 RPL37AP61513 92 aaKnown RBP3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 AMMECR1LQ6DCA0 310 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 CLPSL2Q6UWE3 100 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 TEX261Q6UWH6 196 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 LYZL1Q6UWQ5 148 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 NTM-AS1Q6ZSK4 140 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 BORCS7Q96B45 105 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 NIT2Q9NQR4 276 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 PRR34Q9NV39 138 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 KIF25-AS1Q9Y6Z4 181 aa3.03□□□□□ -1.92
HERPUD1-213ENST00000568358 IGLV10-54A0A075B6I4 117 aa3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 IGHV3-64A0A075B6Q5 118 aa3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 C19orf71A6NCJ1 209 aa3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 SMKR1H3BMG3 65 aa3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 IGLC6P0CF74 106 aa3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 BCL2P10415 239 aa3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 RPL18AQ02543 176 aaKnown RBP3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 CD164Q04900 197 aa3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 SLC51BQ86UW2 128 aa3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 C9orf62Q8N4C0 152 aa3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 C9orf163Q8N9P6 203 aa3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 PGLYRP4Q96LB8 373 aa3.02□□□□□ -1.93
HERPUD1-213ENST00000568358 SRRM2Q9UQ35 2752 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-213ENST00000568358 IGKV3OR2-268A0A0C4DH90 116 aa3.01□□□□□ -1.93
HERPUD1-213ENST00000568358 A8MWL6 223 aa3.01□□□□□ -1.93
HERPUD1-213ENST00000568358 H7C423 109 aa3.01□□□□□ -1.93
HERPUD1-213ENST00000568358 NCR2O95944 276 aa3.01□□□□□ -1.93
HERPUD1-213ENST00000568358 S100A12P80511 92 aa3.01□□□□□ -1.93
HERPUD1-213ENST00000568358 TMEM101Q96IK0 257 aa3.01□□□□□ -1.93
HERPUD1-213ENST00000568358 BTF3L4Q96K17 158 aa3.01□□□□□ -1.93
HERPUD1-213ENST00000568358 RPP21Q9H633 154 aaKnown RBP3.01□□□□□ -1.93
HERPUD1-213ENST00000568358 PKIGQ9Y2B9 76 aa3.01□□□□□ -1.93
HERPUD1-213ENST00000568358 IGLV4-60A0A075B6I1 120 aa3□□□□□ -1.93
HERPUD1-213ENST00000568358 APCSP02743 223 aa3□□□□□ -1.93
HERPUD1-213ENST00000568358 RPS10P46783 165 aaKnown RBP3□□□□□ -1.93
HERPUD1-213ENST00000568358 CNBPP62633 177 aaKnown RBP3□□□□□ -1.93
HERPUD1-213ENST00000568358 SMAGPQ0VAQ4 97 aa3□□□□□ -1.93
HERPUD1-213ENST00000568358 SDIM1Q6ZPB5 146 aa3□□□□□ -1.93
HERPUD1-213ENST00000568358 TCTE3Q8IZS6 198 aa3□□□□□ -1.93
HERPUD1-213ENST00000568358 C20orf203Q8NBC4 194 aa3□□□□□ -1.93
HERPUD1-213ENST00000568358 C7orf33Q8WU49 177 aa3□□□□□ -1.93
HERPUD1-213ENST00000568358 RNF185Q96GF1 192 aa3□□□□□ -1.93
HERPUD1-213ENST00000568358 EIF5A2Q9GZV4 153 aaKnown RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms