RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 H3BMM0 161 aa6.53□□□□□ -1.36
HDGFL3-206ENST00000568294 RS1O15537 224 aa6.53□□□□□ -1.36
HDGFL3-206ENST00000568294 ATXN8Q156A1 80 aa6.53□□□□□ -1.36
HDGFL3-206ENST00000568294 POM121L12Q8N7R1 296 aa6.53□□□□□ -1.36
HDGFL3-206ENST00000568294 TRAV4A0A0B4J268 109 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 ZNF415Q09FC8 603 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 KLK9Q2XQG4 91 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 TRAV8-4A0A0B4J246 113 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 TRBV6-5A0A0K0K1A5 114 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 LINC00694P0DN24 101 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 COX6A2Q02221 97 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 PRORYQ9H606 182 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 ZNF702PQ9H963 129 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 ICOSQ9Y6W8 199 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 LINC01619G3V211 115 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 STHQ8IWL8 128 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 AKAP9Q99996 3911 aa6.52□□□□□ -1.37
HDGFL3-206ENST00000568294 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 ZFAND6Q6FIF0 208 aa6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 MAP6D1Q9H9H5 199 aa6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 IGHV1-58A0A0C4DH39 117 aa6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 B5MCH6 92 aa6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 Q6ZTI0 123 aa6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 Q96MF0 132 aa6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 LOC100131303A0A0U1RQF7 123 aa6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 COX6CP09669 75 aa6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 PRIMA1Q86XR5 153 aa6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 UBE2WQ96B02 151 aa6.51□□□□□ -1.37
HDGFL3-206ENST00000568294 GCN1Q92616 2671 aaKnown RBP6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 TRBV7-9A0A0J9YWB2 115 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 GAGE7O76087 117 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 GAGE12FP0CL80 117 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 GAGE12GP0CL81 117 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 GAGE12IP0CL82 117 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 GAGE2BQ13066 116 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 GAGE2EQ4V326 116 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 PIK3CD-AS1Q5SR53 167 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 C15orf53Q8NAA6 179 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 NOP10Q9NPE3 64 aaKnown RBP6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 GAGE2DQ9UEU5 116 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 UBE2D4Q9Y2X8 147 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 TRGV2A0A075B6R0 118 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 A0A096LPF7 62 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 CLPSL2Q6UWE3 100 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 VSIG2Q96IQ7 327 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 CHCHD7Q9BUK0 85 aa6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 ZNF469Q96JG9 3925 aaPredicted RBP6.5□□□□□ -1.37
HDGFL3-206ENST00000568294 INSP01308 110 aa6.49□□□□□ -1.37
HDGFL3-206ENST00000568294 ITPR3Q14573 2671 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 UBE2L6O14933 153 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 RPL32P62910 135 aaKnown RBP6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 GAGE6Q13070 117 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 ATP6V0E2Q8NHE4 81 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 TMEM101Q96IK0 257 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 FAM104AQ969W3 186 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 Q9HAA7 133 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 USP24Q9UPU5 2620 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 A0A0B4J2C4 111 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 SCGB1A1P11684 91 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 MIAQ16674 131 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 PEMTQ9UBM1 199 aa6.48□□□□□ -1.37
HDGFL3-206ENST00000568294 PFN2P35080 140 aa6.47□□□□□ -1.37
HDGFL3-206ENST00000568294 MRPS36P82909 103 aaKnown RBP6.47□□□□□ -1.37
HDGFL3-206ENST00000568294 H7C423 109 aa6.47□□□□□ -1.37
HDGFL3-206ENST00000568294 IGHV4-31P0DP07 118 aa6.47□□□□□ -1.37
HDGFL3-206ENST00000568294 CIRBPQ14011 172 aaKnown RBP6.47□□□□□ -1.37
HDGFL3-206ENST00000568294 LITAFQ99732 161 aa6.47□□□□□ -1.37
HDGFL3-206ENST00000568294 SETXQ7Z333 2677 aaKnown RBP6.47□□□□□ -1.37
HDGFL3-206ENST00000568294 DEFB130BP0DP73 79 aa6.46□□□□□ -1.37
HDGFL3-206ENST00000568294 DEFB130AP0DP74 79 aa6.46□□□□□ -1.37
HDGFL3-206ENST00000568294 Q8N2B8 174 aa6.46□□□□□ -1.37
HDGFL3-206ENST00000568294 NBPF19A0A087WUL8 3843 aa6.46□□□□□ -1.38
HDGFL3-206ENST00000568294 TRBV10-2A0A0K0K1G8 114 aa6.46□□□□□ -1.38
HDGFL3-206ENST00000568294 TMEM89A2RUT3 159 aa6.46□□□□□ -1.38
HDGFL3-206ENST00000568294 Q6YL49 198 aa6.46□□□□□ -1.38
HDGFL3-206ENST00000568294 ESM1Q9NQ30 184 aa6.46□□□□□ -1.38
HDGFL3-206ENST00000568294 TMEM262E9PQX1 116 aa6.45□□□□□ -1.38
HDGFL3-206ENST00000568294 CCDC179H3BU77 68 aa6.45□□□□□ -1.38
HDGFL3-206ENST00000568294 RPL36AP83881 106 aaKnown RBP6.45□□□□□ -1.38
HDGFL3-206ENST00000568294 DEFB114Q30KQ6 69 aa6.45□□□□□ -1.38
HDGFL3-206ENST00000568294 ODF3L2Q3SX64 289 aa6.45□□□□□ -1.38
HDGFL3-206ENST00000568294 OR13C6PQ8NH95 151 aa6.45□□□□□ -1.38
HDGFL3-206ENST00000568294 RPL36ALQ969Q0 106 aaKnown RBP6.45□□□□□ -1.38
HDGFL3-206ENST00000568294 ODF3Q96PU9 254 aa6.45□□□□□ -1.38
HDGFL3-206ENST00000568294 C5orf38Q86SI9 138 aa6.45□□□□□ -1.38
HDGFL3-206ENST00000568294 CHCHD5Q9BSY4 110 aa6.45□□□□□ -1.38
HDGFL3-206ENST00000568294 TINCRA0A1B0GVN0 87 aa6.44□□□□□ -1.38
HDGFL3-206ENST00000568294 LINC00158P58513 81 aa6.44□□□□□ -1.38
HDGFL3-206ENST00000568294 SPANXA1Q9NS26 97 aa6.44□□□□□ -1.38
HDGFL3-206ENST00000568294 TRGV4A0A0C4DH28 118 aa6.44□□□□□ -1.38
HDGFL3-206ENST00000568294 RNASE1P07998 156 aaKnown RBP6.44□□□□□ -1.38
HDGFL3-206ENST00000568294 LINC00242Q5T6M2 205 aa6.44□□□□□ -1.38
HDGFL3-206ENST00000568294 FLNBO75369 2602 aaKnown RBP6.44□□□□□ -1.38
HDGFL3-206ENST00000568294 BRI3O95415 125 aa6.44□□□□□ -1.38
HDGFL3-206ENST00000568294 C11orf72Q8NBR9 251 aa6.44□□□□□ -1.38
HDGFL3-206ENST00000568294 LINC00308Q8TCZ7 52 aa6.44□□□□□ -1.38
HDGFL3-206ENST00000568294 BBC3Q96PG8 261 aaPredicted RBP6.44□□□□□ -1.38
HDGFL3-206ENST00000568294 SOSTDC1Q6X4U4 206 aa6.43□□□□□ -1.38
HDGFL3-206ENST00000568294 C1orf158Q8N1D5 194 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms