RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 DEFB121Q5J5C9 76 aa5.51□□□□□ -1.53
ATXN3-250ENST00000568290 C10orf99Q6UWK7 81 aa5.51□□□□□ -1.53
ATXN3-250ENST00000568290 LINC01561Q8N1V8 128 aa5.51□□□□□ -1.53
ATXN3-250ENST00000568290 MUC7Q8TAX7 377 aa5.51□□□□□ -1.53
ATXN3-250ENST00000568290 LINC00308Q8TCZ7 52 aa5.51□□□□□ -1.53
ATXN3-250ENST00000568290 Q9H8V8 135 aa5.51□□□□□ -1.53
ATXN3-250ENST00000568290 XCL2Q9UBD3 114 aa5.51□□□□□ -1.53
ATXN3-250ENST00000568290 CDKN2A-AS1Q9UH64 79 aa5.51□□□□□ -1.53
ATXN3-250ENST00000568290 CFAP47Q6ZTR5 3102 aa5.5□□□□□ -1.53
ATXN3-250ENST00000568290 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP5.5□□□□□ -1.53
ATXN3-250ENST00000568290 SMIM9A6NGZ8 99 aa5.5□□□□□ -1.53
ATXN3-250ENST00000568290 INSL3P51460 131 aa5.5□□□□□ -1.53
ATXN3-250ENST00000568290 LINC00242Q5T6M2 205 aa5.5□□□□□ -1.53
ATXN3-250ENST00000568290 HIST2H2BCQ6DN03 193 aa5.5□□□□□ -1.53
ATXN3-250ENST00000568290 HIST2H2BDQ6DRA6 164 aa5.5□□□□□ -1.53
ATXN3-250ENST00000568290 Q6ZSV7 163 aa5.5□□□□□ -1.53
ATXN3-250ENST00000568290 CITED1Q99966 193 aa5.5□□□□□ -1.53
ATXN3-250ENST00000568290 CDC42SE2Q9NRR3 84 aa5.5□□□□□ -1.53
ATXN3-250ENST00000568290 NBASA2RRP1 2371 aa5.5□□□□□ -1.53
ATXN3-250ENST00000568290 IGHV3OR16-12A0A075B7B8 117 aa5.49□□□□□ -1.53
ATXN3-250ENST00000568290 IBA57-AS1B1ANH7 110 aa5.49□□□□□ -1.53
ATXN3-250ENST00000568290 SMIM1B2RUZ4 78 aa5.49□□□□□ -1.53
ATXN3-250ENST00000568290 H3BQ85 93 aa5.49□□□□□ -1.53
ATXN3-250ENST00000568290 GAGE5Q13069 117 aa5.49□□□□□ -1.53
ATXN3-250ENST00000568290 GAGE6Q13070 117 aa5.49□□□□□ -1.53
ATXN3-250ENST00000568290 DEFB136Q30KP8 78 aa5.49□□□□□ -1.53
ATXN3-250ENST00000568290 ODF3L2Q3SX64 289 aa5.49□□□□□ -1.53
ATXN3-250ENST00000568290 ZFHX4Q86UP3 3567 aa5.49□□□□□ -1.53
ATXN3-250ENST00000568290 ATMQ13315 3056 aa5.49□□□□□ -1.53
ATXN3-250ENST00000568290 MED13LQ71F56 2210 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 HRNRQ86YZ3 2850 aaPredicted RBP5.48□□□□□ -1.53
ATXN3-250ENST00000568290 TRAV13-1A0A0B4J241 112 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 A0A1B0GX51 115 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 DNAJC9-AS1A6NH13 148 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 MT-ATP8P03928 68 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 CXCL5P42830 114 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 XGP55808 180 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 SS18Q15532 418 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 C1orf158Q8N1D5 194 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 COX7B2Q8TF08 81 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 KRTAP4-8Q9BYQ9 185 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 DOPEY1Q5JWR5 2465 aa5.48□□□□□ -1.53
ATXN3-250ENST00000568290 LRBAP50851 2863 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 DMXL2Q8TDJ6 3036 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 IGHV3-38A0A0C4DH36 116 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 A0A1W2PRX2 142 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 GAGE12JA6NER3 117 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 NDUFA7O95182 113 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 RPL28P46779 137 aaKnown RBP5.47□□□□□ -1.53
ATXN3-250ENST00000568290 PROK1P58294 105 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 GAGE4Q13068 117 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 S100A7L2Q5SY68 101 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 ADAMTSL4-AS1Q5T5F5 129 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 CEMP1Q6PRD7 247 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-250ENST00000568290 DAND5Q8N907 189 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 KIR2DL5BQ8NHK3 375 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 DEFB104AQ8WTQ1 72 aa5.47□□□□□ -1.53
ATXN3-250ENST00000568290 ZNF625Q96I27 306 aaPredicted RBP5.47□□□□□ -1.53
ATXN3-250ENST00000568290 NOP10Q9NPE3 64 aaKnown RBP5.47□□□□□ -1.53
ATXN3-250ENST00000568290 ABCA2Q9BZC7 2435 aa5.46□□□□□ -1.53
ATXN3-250ENST00000568290 TACC2O95359 2948 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 GAGE7O76087 117 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 IGLV1-51P01701 117 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 GAGE12FP0CL80 117 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 GAGE12GP0CL81 117 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 GAGE12IP0CL82 117 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 RNASE13Q5GAN3 156 aaKnown RBP5.46□□□□□ -1.54
ATXN3-250ENST00000568290 Q6ZSN1 163 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 LINC00643Q86TS7 51 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 C15orf53Q8NAA6 179 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 FAM104AQ969W3 186 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 CHCHD5Q9BSY4 110 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 PRRC2AP48634 2157 aaKnown RBP5.46□□□□□ -1.54
ATXN3-250ENST00000568290 AKAP6Q13023 2319 aa5.46□□□□□ -1.54
ATXN3-250ENST00000568290 ATRXP46100 2492 aa5.45□□□□□ -1.54
ATXN3-250ENST00000568290 TRBV6-8A0A0A6YYG3 113 aa5.45□□□□□ -1.54
ATXN3-250ENST00000568290 TEX49A0A1B0GTD5 131 aa5.45□□□□□ -1.54
ATXN3-250ENST00000568290 A0A1B0GUV1 79 aa5.45□□□□□ -1.54
ATXN3-250ENST00000568290 NDUFV3P56181 108 aaKnown RBP5.45□□□□□ -1.54
ATXN3-250ENST00000568290 COX17Q14061 63 aa5.45□□□□□ -1.54
ATXN3-250ENST00000568290 MAPK1IP1LQ8NDC0 245 aa5.45□□□□□ -1.54
ATXN3-250ENST00000568290 NRGNQ92686 78 aa5.45□□□□□ -1.54
ATXN3-250ENST00000568290 X6R8D5 127 aa5.45□□□□□ -1.54
ATXN3-250ENST00000568290 SPTAN1Q13813 2472 aaKnown RBP5.45□□□□□ -1.54
ATXN3-250ENST00000568290 A0A087WZ39 114 aa5.44□□□□□ -1.54
ATXN3-250ENST00000568290 TRBV7-7A0A0K0K1E9 115 aa5.44□□□□□ -1.54
ATXN3-250ENST00000568290 LYRM9A8MSI8 78 aa5.44□□□□□ -1.54
ATXN3-250ENST00000568290 BAALC-AS2P0C853 105 aa5.44□□□□□ -1.54
ATXN3-250ENST00000568290 LINC00158P58513 81 aa5.44□□□□□ -1.54
ATXN3-250ENST00000568290 C6orf226Q5I0X4 101 aa5.44□□□□□ -1.54
ATXN3-250ENST00000568290 Q6ZTI0 123 aa5.44□□□□□ -1.54
ATXN3-250ENST00000568290 C18orf65Q6ZTR6 163 aa5.44□□□□□ -1.54
ATXN3-250ENST00000568290 ZNF843Q8N446 348 aa5.44□□□□□ -1.54
ATXN3-250ENST00000568290 SND1-IT1Q9HBX3 110 aa5.44□□□□□ -1.54
ATXN3-250ENST00000568290 BSNQ9UPA5 3926 aa5.43□□□□□ -1.54
ATXN3-250ENST00000568290 F5H768 121 aa5.43□□□□□ -1.54
ATXN3-250ENST00000568290 NPC2P61916 151 aa5.43□□□□□ -1.54
ATXN3-250ENST00000568290 CFAP161Q6P656 301 aa5.43□□□□□ -1.54
ATXN3-250ENST00000568290 Q8IZM0 81 aa5.43□□□□□ -1.54
ATXN3-250ENST00000568290 CLEC2BQ92478 149 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms