RNA–Protein interactions for RNA: ENST00000567635.5

SF3B3-209, Transcript of splicing factor 3b subunit 3, human

TSL 5

Gene SF3B3, Length 630 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF3B3-209	ENST00000567635	TPPP3	Q9BW30	176 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635	KLK12	Q9UKR0	248 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635	KIF25-AS1	Q9Y6Z4	181 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635		V9GYV3	84 aa		4.6	□□□□□ -1.67
SF3B3-209	ENST00000567635	TRAV9-1	A0A075B6T8	112 aa		4.59	□□□□□ -1.67
SF3B3-209	ENST00000567635	TRBV6-8	A0A0A6YYG3	113 aa		4.59	□□□□□ -1.67
SF3B3-209	ENST00000567635	TMEM262	E9PQX1	116 aa		4.59	□□□□□ -1.67
SF3B3-209	ENST00000567635		P01737	135 aa		4.59	□□□□□ -1.67
SF3B3-209	ENST00000567635	IGLC6	P0CF74	106 aa		4.59	□□□□□ -1.67
SF3B3-209	ENST00000567635	CACNG7	P62955	275 aa		4.59	□□□□□ -1.67
SF3B3-209	ENST00000567635	SPATA45	Q537H7	98 aa		4.59	□□□□□ -1.67
SF3B3-209	ENST00000567635	AP1S3	Q96PC3	154 aa		4.59	□□□□□ -1.67
SF3B3-209	ENST00000567635	CHCHD7	Q9BUK0	85 aa		4.59	□□□□□ -1.67
SF3B3-209	ENST00000567635	RNASE7	Q9H1E1	156 aa	Known RBP	4.59	□□□□□ -1.67
SF3B3-209	ENST00000567635	TRAPPC1	Q9Y5R8	145 aa		4.59	□□□□□ -1.67
SF3B3-209	ENST00000567635	SMIM27	A0A1W2PRY6	76 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635	EPM2A	B3EWF7	344 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635	IGLC3	P0DOY3	106 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635	NTF3	P20783	257 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635		Q0VG73	95 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635	PMCHL1	Q16048	86 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635	TMEM97	Q5BJF2	176 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635	LYZL1	Q6UWQ5	148 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635	MTURN	Q8N3F0	131 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635		Q8N976	141 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635	BAALC	Q8WXS3	180 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635	DNAJC30	Q96LL9	226 aa		4.58	□□□□□ -1.68
SF3B3-209	ENST00000567635	IGKV2D-24	A0A075B6R9	120 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635	FAM231B	A6NCW3	169 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635		A8MWL6	223 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635		H7C1H1	209 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635		M0QY20	66 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635	LECT2	O14960	151 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635	MGP	P08493	103 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635	CTRL	P40313	264 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635	WFDC2	Q14508	124 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635	CT83	Q5H943	113 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635	UBE2W	Q96B02	151 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635	CHCHD5	Q9BSY4	110 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635	TMEM70	Q9BUB7	260 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635	DNAH11	Q96DT5	4516 aa		4.57	□□□□□ -1.68
SF3B3-209	ENST00000567635	FLG2	Q5D862	2391 aa	Predicted RBP	4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	TRBV25-1	A0A075B6N4	114 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	ANG	P03950	147 aa	Known RBP	4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	HINT1	P49773	126 aa	Predicted RBP	4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	FOXA3	P55318	350 aa	Predicted RBP	4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	TWIST1	Q15672	202 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	COX19	Q49B96	90 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	MPV17L2	Q567V2	206 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	SUMO4	Q6EEV6	95 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	RASL11A	Q6T310	242 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	ENHO	Q6UWT2	76 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	NTM-AS1	Q6ZSK4	140 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	GTF2H5	Q6ZYL4	71 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	BAGE3	Q86Y29	109 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	TSKU	Q8WUA8	353 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	GFRA4	Q9GZZ7	299 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	DPH3P1	Q9H4G8	78 aa		4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	RPP21	Q9H633	154 aa	Known RBP	4.56	□□□□□ -1.68
SF3B3-209	ENST00000567635	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	4.55	□□□□□ -1.68
SF3B3-209	ENST00000567635	IGHV1-24	A0A0C4DH33	117 aa		4.55	□□□□□ -1.68
SF3B3-209	ENST00000567635		H0Y8G0	127 aa		4.55	□□□□□ -1.68
SF3B3-209	ENST00000567635	SMR3B	P02814	79 aa	Predicted RBP	4.55	□□□□□ -1.68
SF3B3-209	ENST00000567635	KRTDAP	P60985	99 aa		4.55	□□□□□ -1.68
SF3B3-209	ENST00000567635	NUP35	Q8NFH5	326 aa		4.55	□□□□□ -1.68
SF3B3-209	ENST00000567635	C1orf43	Q9BWL3	253 aa		4.55	□□□□□ -1.68
SF3B3-209	ENST00000567635	GNB1L	Q9BYB4	327 aa		4.55	□□□□□ -1.68
SF3B3-209	ENST00000567635	FAM30A	Q9NZY2	134 aa		4.55	□□□□□ -1.68
SF3B3-209	ENST00000567635	NAT8B	Q9UHF3	227 aa		4.55	□□□□□ -1.68
SF3B3-209	ENST00000567635	DYNC1H1	Q14204	4646 aa	Known RBP	4.55	□□□□□ -1.68
SF3B3-209	ENST00000567635	CRP	P02741	224 aa		4.54	□□□□□ -1.68
SF3B3-209	ENST00000567635	MT-ND6	P03923	174 aa		4.54	□□□□□ -1.68
SF3B3-209	ENST00000567635	INAFM2	P0DMQ5	153 aa		4.54	□□□□□ -1.68
SF3B3-209	ENST00000567635	HAMP	P81172	84 aa		4.54	□□□□□ -1.68
SF3B3-209	ENST00000567635	GAGE6	Q13070	117 aa		4.54	□□□□□ -1.68
SF3B3-209	ENST00000567635	MIA	Q16674	131 aa		4.54	□□□□□ -1.68
SF3B3-209	ENST00000567635	C14orf177	Q52M58	125 aa		4.54	□□□□□ -1.68
SF3B3-209	ENST00000567635		Q5VSD8	79 aa		4.54	□□□□□ -1.68
SF3B3-209	ENST00000567635	BORCS7	Q96B45	105 aa		4.54	□□□□□ -1.68
SF3B3-209	ENST00000567635	CNFN	Q9BYD5	112 aa		4.54	□□□□□ -1.68
SF3B3-209	ENST00000567635	SRRM2	Q9UQ35	2752 aa	Known RBP	4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635		A0A1B0GUV1	79 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	HIGD1C	A8MV81	97 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	SERF1A	O75920	110 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	RIG	Q13278	110 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	MRPL54	Q6P161	138 aa	Known RBP	4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635		Q6ZSA8	131 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	ATP5L2	Q7Z4Y8	100 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	LINC00269	Q8N2A0	174 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	GATD1	Q8NB37	220 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	GTSF1	Q8WW33	167 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	PGLYRP4	Q96LB8	373 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	TMEM243	Q9BU79	118 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	PRR34	Q9NV39	138 aa		4.53	□□□□□ -1.68
SF3B3-209	ENST00000567635	HSPG2	P98160	4391 aa		4.52	□□□□□ -1.69
SF3B3-209	ENST00000567635		A0A1B0GXF2	115 aa		4.52	□□□□□ -1.69
SF3B3-209	ENST00000567635	USP17L23	D6RBM5	183 aa		4.52	□□□□□ -1.69
SF3B3-209	ENST00000567635		J3QR89	54 aa		4.52	□□□□□ -1.69
SF3B3-209	ENST00000567635	TAX1BP3	O14907	124 aa		4.52	□□□□□ -1.69
SF3B3-209	ENST00000567635	HLA-DQA1	P01909	254 aa		4.52	□□□□□ -1.69

Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms