RNA–Protein interactions for RNA: ENST00000567572.5

CMTM3-214, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CMTM3, Length 1,934 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-214ENST00000567572 SPANXCQ9NY87 97 aa12.76□□□□□ -0.37
CMTM3-214ENST00000567572 IGLV5-45A0A087WSX0 123 aa12.75□□□□□ -0.37
CMTM3-214ENST00000567572 PSMB2P49721 201 aa12.75□□□□□ -0.37
CMTM3-214ENST00000567572 TIRAPP58753 221 aa12.75□□□□□ -0.37
CMTM3-214ENST00000567572 SH2D6Q7Z4S9 175 aa12.75□□□□□ -0.37
CMTM3-214ENST00000567572 TMEM263Q8WUH6 116 aaKnown RBP12.75□□□□□ -0.37
CMTM3-214ENST00000567572 RNF183Q96D59 192 aa12.75□□□□□ -0.37
CMTM3-214ENST00000567572 FAM110AQ9BQ89 295 aa12.75□□□□□ -0.37
CMTM3-214ENST00000567572 SPATA25Q9BR10 227 aa12.75□□□□□ -0.37
CMTM3-214ENST00000567572 C2CD3Q4AC94 2353 aa12.75□□□□□ -0.37
CMTM3-214ENST00000567572 M0QXV9 152 aa12.74□□□□□ -0.37
CMTM3-214ENST00000567572 SMAGPQ0VAQ4 97 aa12.74□□□□□ -0.37
CMTM3-214ENST00000567572 SBSPONQ8IVN8 264 aa12.74□□□□□ -0.37
CMTM3-214ENST00000567572 C1orf158Q8N1D5 194 aa12.74□□□□□ -0.37
CMTM3-214ENST00000567572 LINC00482Q8N8I6 264 aa12.74□□□□□ -0.37
CMTM3-214ENST00000567572 TIMM17BO60830 172 aa12.74□□□□□ -0.37
CMTM3-214ENST00000567572 IGHV3-33P01772 117 aa12.74□□□□□ -0.37
CMTM3-214ENST00000567572 XCL2Q9UBD3 114 aa12.74□□□□□ -0.37
CMTM3-214ENST00000567572 NACAE9PAV3 2078 aa12.73□□□□□ -0.37
CMTM3-214ENST00000567572 IGHV3-64A0A075B6Q5 118 aa12.73□□□□□ -0.37
CMTM3-214ENST00000567572 PRM2P04554 102 aa12.73□□□□□ -0.37
CMTM3-214ENST00000567572 SCGB1A1P11684 91 aa12.73□□□□□ -0.37
CMTM3-214ENST00000567572 Q6ZUT4 128 aa12.73□□□□□ -0.37
CMTM3-214ENST00000567572 MUSTN1Q8IVN3 82 aa12.73□□□□□ -0.37
CMTM3-214ENST00000567572 LITAFQ99732 161 aa12.73□□□□□ -0.37
CMTM3-214ENST00000567572 GEMIN7Q9H840 131 aaKnown RBP12.73□□□□□ -0.37
CMTM3-214ENST00000567572 NDUFA12Q9UI09 145 aa12.73□□□□□ -0.37
CMTM3-214ENST00000567572 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.72□□□□□ -0.37
CMTM3-214ENST00000567572 IGKV2-29A2NJV5 120 aaPredicted RBP12.72□□□□□ -0.37
CMTM3-214ENST00000567572 PF4P02776 101 aa12.72□□□□□ -0.37
CMTM3-214ENST00000567572 AZU1P20160 251 aa12.72□□□□□ -0.37
CMTM3-214ENST00000567572 ZFAND6Q6FIF0 208 aa12.72□□□□□ -0.37
CMTM3-214ENST00000567572 CEMP1Q6PRD7 247 aaPredicted RBP12.72□□□□□ -0.37
CMTM3-214ENST00000567572 ERG28Q9UKR5 140 aa12.72□□□□□ -0.37
CMTM3-214ENST00000567572 CSDC2Q9Y534 153 aaKnown RBP12.72□□□□□ -0.37
CMTM3-214ENST00000567572 TCL1BO95988 128 aa12.72□□□□□ -0.37
CMTM3-214ENST00000567572 SMCPP49901 116 aaPredicted RBP12.72□□□□□ -0.37
CMTM3-214ENST00000567572 FAM19A3Q7Z5A8 133 aa12.72□□□□□ -0.37
CMTM3-214ENST00000567572 C19orf73Q9NVV2 129 aa12.72□□□□□ -0.37
CMTM3-214ENST00000567572 TRAV4A0A0B4J268 109 aa12.71□□□□□ -0.37
CMTM3-214ENST00000567572 GAGE12HA6NDE8 117 aa12.71□□□□□ -0.37
CMTM3-214ENST00000567572 RPL36AP83881 106 aaKnown RBP12.71□□□□□ -0.37
CMTM3-214ENST00000567572 DAZ2Q13117 558 aaKnown RBP12.71□□□□□ -0.37
CMTM3-214ENST00000567572 DAZ4Q86SG3 579 aaKnown RBP12.71□□□□□ -0.37
CMTM3-214ENST00000567572 RPL36ALQ969Q0 106 aaKnown RBP12.71□□□□□ -0.37
CMTM3-214ENST00000567572 DAZ3Q9NR90 486 aaKnown RBP12.71□□□□□ -0.37
CMTM3-214ENST00000567572 Q9UF83 564 aa12.71□□□□□ -0.37
CMTM3-214ENST00000567572 FOXI1Q12951 378 aa12.7□□□□□ -0.38
CMTM3-214ENST00000567572 SIGMAR1Q99720 223 aa12.7□□□□□ -0.38
CMTM3-214ENST00000567572 K7EQD1 137 aa12.7□□□□□ -0.38
CMTM3-214ENST00000567572 MIAQ16674 131 aa12.7□□□□□ -0.38
CMTM3-214ENST00000567572 DGAT2L7PQ6IED9 249 aa12.7□□□□□ -0.38
CMTM3-214ENST00000567572 TEN1Q86WV5 123 aa12.7□□□□□ -0.38
CMTM3-214ENST00000567572 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP12.7□□□□□ -0.38
CMTM3-214ENST00000567572 TRGV1A0A0A0MS02 117 aa12.69□□□□□ -0.38
CMTM3-214ENST00000567572 TRAV8-3A0A0A6YYJ7 113 aa12.69□□□□□ -0.38
CMTM3-214ENST00000567572 SCGB1C2P0DMR2 95 aa12.69□□□□□ -0.38
CMTM3-214ENST00000567572 IFITM1P13164 125 aa12.69□□□□□ -0.38
CMTM3-214ENST00000567572 HERVK_113P63121 156 aa12.69□□□□□ -0.38
CMTM3-214ENST00000567572 MTURNQ8N3F0 131 aa12.69□□□□□ -0.38
CMTM3-214ENST00000567572 EIF4EBP3O60516 100 aaPredicted RBP12.68□□□□□ -0.38
CMTM3-214ENST00000567572 PPDPFLQ8WWR9 84 aa12.68□□□□□ -0.38
CMTM3-214ENST00000567572 IGHV3-38A0A0C4DH36 116 aa12.67□□□□□ -0.38
CMTM3-214ENST00000567572 TRBV30A0A0K0K1B3 111 aa12.67□□□□□ -0.38
CMTM3-214ENST00000567572 NDUFA1O15239 70 aa12.67□□□□□ -0.38
CMTM3-214ENST00000567572 RNASE13Q5GAN3 156 aaKnown RBP12.67□□□□□ -0.38
CMTM3-214ENST00000567572 WFDC10AQ9H1F0 79 aa12.67□□□□□ -0.38
CMTM3-214ENST00000567572 SFTA2Q6UW10 78 aa12.66□□□□□ -0.38
CMTM3-214ENST00000567572 C16orf74Q96GX8 76 aa12.66□□□□□ -0.38
CMTM3-214ENST00000567572 LINC01600Q96MT4 127 aa12.66□□□□□ -0.38
CMTM3-214ENST00000567572 CITED1Q99966 193 aa12.66□□□□□ -0.38
CMTM3-214ENST00000567572 FLNBO75369 2602 aaKnown RBP12.66□□□□□ -0.38
CMTM3-214ENST00000567572 SPINK8P0C7L1 97 aa12.66□□□□□ -0.38
CMTM3-214ENST00000567572 IGLV5-39A0A0G2JS06 123 aa12.65□□□□□ -0.38
CMTM3-214ENST00000567572 GIG44P09565 113 aaPredicted RBP12.65□□□□□ -0.38
CMTM3-214ENST00000567572 GTSF1LQ9H1H1 148 aa12.65□□□□□ -0.38
CMTM3-214ENST00000567572 IGHV3OR16-12A0A075B7B8 117 aa12.64□□□□□ -0.39
CMTM3-214ENST00000567572 ATXN8Q156A1 80 aa12.64□□□□□ -0.39
CMTM3-214ENST00000567572 CDKN2A-AS1Q9UH64 79 aa12.64□□□□□ -0.39
CMTM3-214ENST00000567572 TENM1Q9UKZ4 2725 aa12.64□□□□□ -0.39
CMTM3-214ENST00000567572 COPS9Q8WXC6 57 aa12.64□□□□□ -0.39
CMTM3-214ENST00000567572 H7C423 109 aa12.63□□□□□ -0.39
CMTM3-214ENST00000567572 Q1RN00 199 aa12.63□□□□□ -0.39
CMTM3-214ENST00000567572 Q6ZTI0 123 aa12.63□□□□□ -0.39
CMTM3-214ENST00000567572 F8P00451 2351 aa12.63□□□□□ -0.39
CMTM3-214ENST00000567572 JMJD1CQ15652 2540 aa12.63□□□□□ -0.39
CMTM3-214ENST00000567572 INSL3P51460 131 aa12.62□□□□□ -0.39
CMTM3-214ENST00000567572 CIRBPQ14011 172 aaKnown RBP12.62□□□□□ -0.39
CMTM3-214ENST00000567572 SPATA3Q8NHX4 192 aa12.62□□□□□ -0.39
CMTM3-214ENST00000567572 TMEM101Q96IK0 257 aa12.62□□□□□ -0.39
CMTM3-214ENST00000567572 VWFP04275 2813 aa12.62□□□□□ -0.39
CMTM3-214ENST00000567572 PRSS2P07478 247 aa12.62□□□□□ -0.39
CMTM3-214ENST00000567572 ADAMTSL4-AS1Q5T5F5 129 aa12.62□□□□□ -0.39
CMTM3-214ENST00000567572 LINC00242Q5T6M2 205 aa12.62□□□□□ -0.39
CMTM3-214ENST00000567572 PPDPFQ9H3Y8 114 aa12.62□□□□□ -0.39
CMTM3-214ENST00000567572 SLC25A20O43772 301 aa12.61□□□□□ -0.39
CMTM3-214ENST00000567572 OVOL2Q9BRP0 275 aa12.61□□□□□ -0.39
CMTM3-214ENST00000567572 RPL35AP18077 110 aaKnown RBP12.6□□□□□ -0.39
CMTM3-214ENST00000567572 TRBV6-4A0A1B0GX49 114 aa12.6□□□□□ -0.39
CMTM3-214ENST00000567572 COX6CP09669 75 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms