RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 C16orf74Q96GX8 76 aa8.51□□□□□ -1.05
CDH1-210ENST00000566612 ASH1LQ9NR48 2969 aaKnown RBP8.51□□□□□ -1.05
CDH1-210ENST00000566612 A0A0J9YXY3 114 aa8.5□□□□□ -1.05
CDH1-210ENST00000566612 TMEM263Q8WUH6 116 aaKnown RBP8.5□□□□□ -1.05
CDH1-210ENST00000566612 G3V4G9 280 aa8.5□□□□□ -1.05
CDH1-210ENST00000566612 GAGE2BQ13066 116 aa8.5□□□□□ -1.05
CDH1-210ENST00000566612 DAZ2Q13117 558 aaKnown RBP8.5□□□□□ -1.05
CDH1-210ENST00000566612 GAGE2EQ4V326 116 aa8.5□□□□□ -1.05
CDH1-210ENST00000566612 DAZ4Q86SG3 579 aaKnown RBP8.5□□□□□ -1.05
CDH1-210ENST00000566612 DAZ3Q9NR90 486 aaKnown RBP8.5□□□□□ -1.05
CDH1-210ENST00000566612 GAGE2DQ9UEU5 116 aa8.5□□□□□ -1.05
CDH1-210ENST00000566612 IGSF10Q6WRI0 2623 aa8.5□□□□□ -1.05
CDH1-210ENST00000566612 CRLF1O75462 422 aa8.5□□□□□ -1.05
CDH1-210ENST00000566612 ANGP03950 147 aaKnown RBP8.49□□□□□ -1.05
CDH1-210ENST00000566612 LINC01006Q8NI28 216 aa8.49□□□□□ -1.05
CDH1-210ENST00000566612 IGLV10-54A0A075B6I4 117 aa8.49□□□□□ -1.05
CDH1-210ENST00000566612 TMEM223A0PJW6 202 aa8.49□□□□□ -1.05
CDH1-210ENST00000566612 NFE4Q86UQ8 179 aa8.49□□□□□ -1.05
CDH1-210ENST00000566612 CARD19Q96LW7 228 aa8.49□□□□□ -1.05
CDH1-210ENST00000566612 PRSS47A8MTI9 375 aa8.48□□□□□ -1.05
CDH1-210ENST00000566612 BRI3O95415 125 aa8.48□□□□□ -1.05
CDH1-210ENST00000566612 TCL1BO95988 128 aa8.48□□□□□ -1.05
CDH1-210ENST00000566612 UBE2WQ96B02 151 aa8.48□□□□□ -1.05
CDH1-210ENST00000566612 DEFB135Q30KP9 77 aa8.48□□□□□ -1.05
CDH1-210ENST00000566612 S100A7L2Q5SY68 101 aa8.48□□□□□ -1.05
CDH1-210ENST00000566612 ANAPC13Q9BS18 74 aa8.48□□□□□ -1.05
CDH1-210ENST00000566612 ODF3L2Q3SX64 289 aa8.48□□□□□ -1.05
CDH1-210ENST00000566612 RPL32P62910 135 aaKnown RBP8.47□□□□□ -1.05
CDH1-210ENST00000566612 ZFAND6Q6FIF0 208 aa8.47□□□□□ -1.05
CDH1-210ENST00000566612 ATP6V0E2Q8NHE4 81 aa8.47□□□□□ -1.05
CDH1-210ENST00000566612 SMR3AQ99954 134 aa8.47□□□□□ -1.05
CDH1-210ENST00000566612 CLEC2BQ92478 149 aa8.47□□□□□ -1.05
CDH1-210ENST00000566612 ZNF580Q9UK33 172 aa8.47□□□□□ -1.05
CDH1-210ENST00000566612 KIF25-AS1Q9Y6Z4 181 aa8.47□□□□□ -1.05
CDH1-210ENST00000566612 IGLV4-69A0A075B6H9 119 aa8.46□□□□□ -1.06
CDH1-210ENST00000566612 ANKRD29Q8N6D5 301 aa8.46□□□□□ -1.06
CDH1-210ENST00000566612 ICOSQ9Y6W8 199 aa8.46□□□□□ -1.06
CDH1-210ENST00000566612 TSPEAR-AS2P59090 65 aa8.46□□□□□ -1.06
CDH1-210ENST00000566612 FOXI1Q12951 378 aa8.46□□□□□ -1.06
CDH1-210ENST00000566612 LINC01620Q4KN68 170 aa8.46□□□□□ -1.06
CDH1-210ENST00000566612 TEN1Q86WV5 123 aa8.46□□□□□ -1.06
CDH1-210ENST00000566612 TRAV4A0A0B4J268 109 aa8.45□□□□□ -1.06
CDH1-210ENST00000566612 TRBV10-1A0A0K0K1A3 114 aa8.45□□□□□ -1.06
CDH1-210ENST00000566612 TINCRA0A1B0GVN0 87 aa8.45□□□□□ -1.06
CDH1-210ENST00000566612 Q6ZSN1 163 aa8.45□□□□□ -1.06
CDH1-210ENST00000566612 LOC100131303A0A0U1RQF7 123 aa8.44□□□□□ -1.06
CDH1-210ENST00000566612 NDUFA7O95182 113 aa8.44□□□□□ -1.06
CDH1-210ENST00000566612 IGHV3-30P01768 117 aa8.44□□□□□ -1.06
CDH1-210ENST00000566612 IGHV3-30-5P0DP03 117 aa8.44□□□□□ -1.06
CDH1-210ENST00000566612 SCGB1A1P11684 91 aa8.44□□□□□ -1.06
CDH1-210ENST00000566612 LINC00315P59091 139 aa8.44□□□□□ -1.06
CDH1-210ENST00000566612 IFITM1P13164 125 aa8.44□□□□□ -1.06
CDH1-210ENST00000566612 LINC00482Q8N8I6 264 aa8.44□□□□□ -1.06
CDH1-210ENST00000566612 APOC4P55056 127 aa8.44□□□□□ -1.06
CDH1-210ENST00000566612 GAGE2AQ6NT46 116 aa8.44□□□□□ -1.06
CDH1-210ENST00000566612 RBMY1FQ15415 496 aaKnown RBP8.44□□□□□ -1.06
CDH1-210ENST00000566612 SPANXB1Q9NS25 103 aaPredicted RBP8.44□□□□□ -1.06
CDH1-210ENST00000566612 RS1O15537 224 aa8.43□□□□□ -1.06
CDH1-210ENST00000566612 C3orf56Q8N813 242 aa8.43□□□□□ -1.06
CDH1-210ENST00000566612 UFSP1Q6NVU6 142 aa8.43□□□□□ -1.06
CDH1-210ENST00000566612 USP24Q9UPU5 2620 aa8.43□□□□□ -1.06
CDH1-210ENST00000566612 SND1-IT1Q9HBX3 110 aa8.43□□□□□ -1.06
CDH1-210ENST00000566612 Q9UF83 564 aa8.43□□□□□ -1.06
CDH1-210ENST00000566612 CSMD1Q96PZ7 3565 aa8.42□□□□□ -1.06
CDH1-210ENST00000566612 MIAQ16674 131 aa8.42□□□□□ -1.06
CDH1-210ENST00000566612 COX7B2Q8TF08 81 aa8.42□□□□□ -1.06
CDH1-210ENST00000566612 FAM19A4Q96LR4 140 aa8.42□□□□□ -1.06
CDH1-210ENST00000566612 UBE2D4Q9Y2X8 147 aa8.42□□□□□ -1.06
CDH1-210ENST00000566612 PYGO1Q9Y3Y4 419 aa8.42□□□□□ -1.06
CDH1-210ENST00000566612 INSL3P51460 131 aa8.42□□□□□ -1.06
CDH1-210ENST00000566612 INAFM1C9JVW0 142 aa8.42□□□□□ -1.06
CDH1-210ENST00000566612 MIR7-3HGQ8N6C7 128 aa8.42□□□□□ -1.06
CDH1-210ENST00000566612 ITPR1Q14643 2758 aa8.42□□□□□ -1.06
CDH1-210ENST00000566612 IGHV3-33P01772 117 aa8.41□□□□□ -1.06
CDH1-210ENST00000566612 DEFB121Q5J5C9 76 aa8.41□□□□□ -1.06
CDH1-210ENST00000566612 C9orf66Q5T8R8 295 aa8.41□□□□□ -1.06
CDH1-210ENST00000566612 HERV-K104P63124 156 aa8.41□□□□□ -1.06
CDH1-210ENST00000566612 HELZ2Q9BYK8 2649 aaKnown RBP8.41□□□□□ -1.06
CDH1-210ENST00000566612 TRAV13-2A0A0B4J235 113 aa8.4□□□□□ -1.06
CDH1-210ENST00000566612 C1orf158Q8N1D5 194 aa8.4□□□□□ -1.06
CDH1-210ENST00000566612 MUC4Q99102 2169 aa8.4□□□□□ -1.06
CDH1-210ENST00000566612 PLA2G2AP14555 144 aa8.4□□□□□ -1.07
CDH1-210ENST00000566612 KLK9Q2XQG4 91 aa8.4□□□□□ -1.07
CDH1-210ENST00000566612 LINC01546A6NGU7 62 aa8.39□□□□□ -1.07
CDH1-210ENST00000566612 BAALC-AS2P0C853 105 aa8.39□□□□□ -1.07
CDH1-210ENST00000566612 PIK3CD-AS1Q5SR53 167 aa8.39□□□□□ -1.07
CDH1-210ENST00000566612 FAM222AQ5U5X8 452 aa8.39□□□□□ -1.07
CDH1-210ENST00000566612 TEX15Q9BXT5 2789 aa8.39□□□□□ -1.07
CDH1-210ENST00000566612 POM121L12Q8N7R1 296 aa8.39□□□□□ -1.07
CDH1-210ENST00000566612 CHD6Q8TD26 2715 aa8.39□□□□□ -1.07
CDH1-210ENST00000566612 TRIAP1O43715 76 aa8.39□□□□□ -1.07
CDH1-210ENST00000566612 C15orf53Q8NAA6 179 aa8.39□□□□□ -1.07
CDH1-210ENST00000566612 A0A0B4J2C4 111 aa8.38□□□□□ -1.07
CDH1-210ENST00000566612 LINC00694P0DN24 101 aa8.38□□□□□ -1.07
CDH1-210ENST00000566612 MRPS36P82909 103 aaKnown RBP8.38□□□□□ -1.07
CDH1-210ENST00000566612 PRO0255Q9UI72 69 aa8.38□□□□□ -1.07
CDH1-210ENST00000566612 CRYBA4P53673 196 aa8.38□□□□□ -1.07
CDH1-210ENST00000566612 ATRQ13535 2644 aa8.37□□□□□ -1.07
CDH1-210ENST00000566612 ATP5G1P05496 136 aa8.37□□□□□ -1.07
CDH1-210ENST00000566612 LAMTOR3Q9UHA4 124 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms