RNA–Protein interactions for RNA: ENST00000566466.1

SMPD3-207, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-207ENST00000566466 OPRPNQ99935 248 aaPredicted RBP6.17□□□□□ -1.42
SMPD3-207ENST00000566466 IGIPA6NJ69 53 aa6.16□□□□□ -1.42
SMPD3-207ENST00000566466 K7EMI3 77 aa6.16□□□□□ -1.42
SMPD3-207ENST00000566466 FCER1GP30273 86 aa6.16□□□□□ -1.42
SMPD3-207ENST00000566466 LAGE3Q14657 143 aa6.16□□□□□ -1.42
SMPD3-207ENST00000566466 PMCHL1Q16048 86 aa6.16□□□□□ -1.42
SMPD3-207ENST00000566466 LINC00173Q6ZV60 143 aa6.16□□□□□ -1.42
SMPD3-207ENST00000566466 MAPKAPK5-AS1Q8N8E1 139 aa6.16□□□□□ -1.42
SMPD3-207ENST00000566466 TIMM21Q9BVV7 248 aa6.16□□□□□ -1.42
SMPD3-207ENST00000566466 PDZD11Q5EBL8 140 aa6.15□□□□□ -1.42
SMPD3-207ENST00000566466 C2orf66Q6UXQ4 117 aa6.15□□□□□ -1.42
SMPD3-207ENST00000566466 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.15□□□□□ -1.42
SMPD3-207ENST00000566466 TOMM6Q96B49 74 aa6.15□□□□□ -1.42
SMPD3-207ENST00000566466 CDC42SE2Q9NRR3 84 aa6.15□□□□□ -1.42
SMPD3-207ENST00000566466 KLK12Q9UKR0 248 aa6.15□□□□□ -1.42
SMPD3-207ENST00000566466 CSDC2Q9Y534 153 aaKnown RBP6.15□□□□□ -1.42
SMPD3-207ENST00000566466 DNAH5Q8TE73 4624 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 IGLV4-3A0A075B6K6 122 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 LOC100996750A0A140TA64 210 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 K7EP13 123 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 SERF1AO75920 110 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 LINC00614P0C842 121 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 ZNF25P17030 456 aaPredicted RBP6.14□□□□□ -1.43
SMPD3-207ENST00000566466 ORMDL2Q53FV1 153 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 RNASE13Q5GAN3 156 aaKnown RBP6.14□□□□□ -1.43
SMPD3-207ENST00000566466 TTC32Q5I0X7 151 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 COA6Q5JTJ3 125 aaKnown RBP6.14□□□□□ -1.43
SMPD3-207ENST00000566466 ZC2HC1BQ5TFG8 222 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 CLPSL2Q6UWE3 100 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 LINC00269Q8N2A0 174 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 PRSS3P2Q8NHM4 247 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 KRTAP4-6Q9BYQ5 205 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 PYGO1Q9Y3Y4 419 aa6.14□□□□□ -1.43
SMPD3-207ENST00000566466 PKD1P98161 4303 aa6.13□□□□□ -1.43
SMPD3-207ENST00000566466 EPPK1P58107 5090 aaKnown RBP6.13□□□□□ -1.43
SMPD3-207ENST00000566466 A0A087WX48 190 aa6.13□□□□□ -1.43
SMPD3-207ENST00000566466 TMEM262E9PQX1 116 aa6.13□□□□□ -1.43
SMPD3-207ENST00000566466 MRPS36P82909 103 aaKnown RBP6.13□□□□□ -1.43
SMPD3-207ENST00000566466 WFDC2Q14508 124 aa6.13□□□□□ -1.43
SMPD3-207ENST00000566466 RNASEKQ6P5S7 137 aaKnown RBP6.13□□□□□ -1.43
SMPD3-207ENST00000566466 C6orf223Q8N319 242 aa6.13□□□□□ -1.43
SMPD3-207ENST00000566466 SPANXA1Q9NS26 97 aa6.13□□□□□ -1.43
SMPD3-207ENST00000566466 AP5S1Q9NUS5 200 aa6.13□□□□□ -1.43
SMPD3-207ENST00000566466 CYSLTR1Q9Y271 337 aa6.13□□□□□ -1.43
SMPD3-207ENST00000566466 TMA7Q9Y2S6 64 aaKnown RBP6.13□□□□□ -1.43
SMPD3-207ENST00000566466 UBE2L6O14933 153 aa6.12□□□□□ -1.43
SMPD3-207ENST00000566466 ANGP03950 147 aaKnown RBP6.12□□□□□ -1.43
SMPD3-207ENST00000566466 PKIAP61925 76 aa6.12□□□□□ -1.43
SMPD3-207ENST00000566466 REG3AQ06141 175 aa6.12□□□□□ -1.43
SMPD3-207ENST00000566466 FA2HQ7L5A8 372 aa6.12□□□□□ -1.43
SMPD3-207ENST00000566466 ZNF664Q8N3J9 261 aa6.12□□□□□ -1.43
SMPD3-207ENST00000566466 C10orf126Q8N4M7 172 aa6.12□□□□□ -1.43
SMPD3-207ENST00000566466 UBE2WQ96B02 151 aa6.12□□□□□ -1.43
SMPD3-207ENST00000566466 CHCHD1Q96BP2 118 aaKnown RBP6.12□□□□□ -1.43
SMPD3-207ENST00000566466 AMELXQ99217 191 aa6.12□□□□□ -1.43
SMPD3-207ENST00000566466 DYNC1H1Q14204 4646 aaKnown RBP6.12□□□□□ -1.43
SMPD3-207ENST00000566466 PKHD1P08F94 4074 aa6.11□□□□□ -1.43
SMPD3-207ENST00000566466 LRCOL1A6NCL2 159 aa6.11□□□□□ -1.43
SMPD3-207ENST00000566466 BTF3P20290 206 aaKnown RBP6.11□□□□□ -1.43
SMPD3-207ENST00000566466 FAM19A2Q8N3H0 131 aa6.11□□□□□ -1.43
SMPD3-207ENST00000566466 OR5A1Q8NGJ0 315 aa6.11□□□□□ -1.43
SMPD3-207ENST00000566466 TIMM17AQ99595 171 aa6.11□□□□□ -1.43
SMPD3-207ENST00000566466 Q9HAA7 133 aa6.11□□□□□ -1.43
SMPD3-207ENST00000566466 LINC00959A0A1B0GUT2 108 aa6.1□□□□□ -1.43
SMPD3-207ENST00000566466 A0A1B0GVY2 172 aa6.1□□□□□ -1.43
SMPD3-207ENST00000566466 HBDP02042 147 aa6.1□□□□□ -1.43
SMPD3-207ENST00000566466 C1orf134Q5TEV5 83 aa6.1□□□□□ -1.43
SMPD3-207ENST00000566466 AMMECR1LQ6DCA0 310 aa6.1□□□□□ -1.43
SMPD3-207ENST00000566466 ERASQ7Z444 233 aa6.1□□□□□ -1.43
SMPD3-207ENST00000566466 BAALCQ8WXS3 180 aa6.1□□□□□ -1.43
SMPD3-207ENST00000566466 IGLV10-54A0A075B6I4 117 aa6.09□□□□□ -1.43
SMPD3-207ENST00000566466 IFITM10A6NMD0 228 aa6.09□□□□□ -1.43
SMPD3-207ENST00000566466 C1orf196B1AJZ1 125 aa6.09□□□□□ -1.43
SMPD3-207ENST00000566466 NPSP0C0P6 89 aa6.09□□□□□ -1.43
SMPD3-207ENST00000566466 FOXI1Q12951 378 aa6.09□□□□□ -1.43
SMPD3-207ENST00000566466 MIAQ16674 131 aa6.09□□□□□ -1.43
SMPD3-207ENST00000566466 FAM19A3Q7Z5A8 133 aa6.09□□□□□ -1.43
SMPD3-207ENST00000566466 BAGE3Q86Y29 109 aa6.09□□□□□ -1.43
SMPD3-207ENST00000566466 TMEM141Q96I45 108 aa6.09□□□□□ -1.43
SMPD3-207ENST00000566466 TRAV9-2A0A087WT02 112 aa6.08□□□□□ -1.44
SMPD3-207ENST00000566466 TRAV8-3A0A0A6YYJ7 113 aa6.08□□□□□ -1.44
SMPD3-207ENST00000566466 UBE2D1P51668 147 aa6.08□□□□□ -1.44
SMPD3-207ENST00000566466 RAB5BP61020 215 aa6.08□□□□□ -1.44
SMPD3-207ENST00000566466 COX6A2Q02221 97 aa6.08□□□□□ -1.44
SMPD3-207ENST00000566466 SPATA12Q7Z6I5 190 aa6.08□□□□□ -1.44
SMPD3-207ENST00000566466 CHCHD10Q8WYQ3 142 aaPredicted RBP6.08□□□□□ -1.44
SMPD3-207ENST00000566466 TMEM18Q96B42 140 aa6.08□□□□□ -1.44
SMPD3-207ENST00000566466 IGLV4-69A0A075B6H9 119 aa6.07□□□□□ -1.44
SMPD3-207ENST00000566466 IGKV3OR2-268A0A0C4DH90 116 aa6.07□□□□□ -1.44
SMPD3-207ENST00000566466 HSBP1O75506 76 aa6.07□□□□□ -1.44
SMPD3-207ENST00000566466 ANKRD39Q53RE8 183 aa6.07□□□□□ -1.44
SMPD3-207ENST00000566466 LINC00242Q5T6M2 205 aa6.07□□□□□ -1.44
SMPD3-207ENST00000566466 TMEM101Q96IK0 257 aa6.07□□□□□ -1.44
SMPD3-207ENST00000566466 SCGB3A1Q96QR1 104 aa6.07□□□□□ -1.44
SMPD3-207ENST00000566466 LRP1BQ9NZR2 4599 aa6.07□□□□□ -1.44
SMPD3-207ENST00000566466 DNAH8Q96JB1 4490 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 IGKV2D-24A0A075B6R9 120 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 A0A087WTM6 91 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 TRAV13-1A0A0B4J241 112 aa6.06□□□□□ -1.44
SMPD3-207ENST00000566466 TRAV8-4A0A0B4J246 113 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms