RNA–Protein interactions for RNA: ENST00000564600.6

CHD9-211, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 4

Gene CHD9, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-211ENST00000564600 ZNF609O15014 1411 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 PRG4Q92954 1404 aaPredicted RBP0.3□□□□□ -2.36
CHD9-211ENST00000564600 BDP1A6H8Y1 2624 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 FAM135AQ9P2D6 1515 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 ITPR3Q14573 2671 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 TRAV30A0A087WSZ9 112 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 GVQW2A0A096LPI5 108 aaPredicted RBP0.3□□□□□ -2.36
CHD9-211ENST00000564600 TRBV6-1A0A0K0K1D8 114 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 A0A1B0GV90 55 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 SPAARA0A1B0GVQ0 90 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 CRYM-AS1A6NIL9 109 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 ZNF815PA8K554 130 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 CHKB-CPT1BH3BT56 60 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 SYS1-DBNDD2H3BUS1 97 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 M0R129 80 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 BCE1O60756 84 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 GYPAP02724 150 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 S100A8P05109 93 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 NMBP08949 121 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 HMGA1P17096 107 aaKnown RBP0.3□□□□□ -2.36
CHD9-211ENST00000564600 SNCAP37840 140 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 RPL38P63173 70 aaKnown RBP0.3□□□□□ -2.36
CHD9-211ENST00000564600 HSD52Q0P140 79 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 COL5A1-AS1Q5SY13 56 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 NCMAPQ5T1S8 102 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 Q8N8P6 123 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 DPY30Q9C005 99 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 FXYD6Q9H0Q3 95 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 LINC01558Q9Y6Z2 57 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 FAM208BQ5VWN6 2430 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 BPTFQ12830 3046 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 ABCA13Q86UQ4 5058 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 LRRC37A3O60309 1634 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 NSD3Q9BZ95 1437 aa0.3□□□□□ -2.36
CHD9-211ENST00000564600 POLA1P09884 1462 aaPredicted RBP0.29□□□□□ -2.36
CHD9-211ENST00000564600 AFDNP55196 1824 aaKnown RBP0.29□□□□□ -2.36
CHD9-211ENST00000564600 EIF4G3O43432 1585 aaKnown RBP0.29□□□□□ -2.36
CHD9-211ENST00000564600 HYDINQ4G0P3 5121 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 UQCRHLA0A096LP55 91 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 IGLC7A0M8Q6 106 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 PHGR1C9JFL3 82 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 H3BQF6 201 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 M0R143 59 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 M0R3E3 92 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 ATOX1O00244 68 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 PITX3O75364 302 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 LY6G6CO95867 125 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 CYB5AP00167 134 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 TFF1P04155 84 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 UQCRHP07919 91 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 ASIPP42127 132 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 RBP2P50120 134 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 GNGT1P63211 74 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 SEC11AP67812 179 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 KRTAP21-1Q3LI58 79 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 NMSQ5H8A3 153 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 Q6JHZ5 121 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 SFTA2Q6UW10 78 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 FAM167A-AS1Q96KT0 104 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 TRGV9Q99603 122 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 DPH3P1Q9H4G8 78 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 NDUFA4L2Q9NRX3 87 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 RABAC1Q9UI14 185 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 U3KQA8 63 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 ARL2-SNX15V9GYD0 113 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 BCORL1Q5H9F3 1711 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 CPDO75976 1380 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 KIF13AQ9H1H9 1805 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 HERC1Q15751 4861 aa0.29□□□□□ -2.36
CHD9-211ENST00000564600 ADGRB1O14514 1584 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 LAMC3Q9Y6N6 1575 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 EPPK1P58107 5090 aaKnown RBP0.28□□□□□ -2.36
CHD9-211ENST00000564600 FXYD6-FXYD2A0A087WZ82 144 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 TRBV7-4A0A0J9YYF1 115 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 KANTRA0A1W2PQU2 76 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 HMGN4O00479 90 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 GNGT2O14610 69 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 PRH1P02810 166 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 FAUP35544 74 aaKnown RBP0.28□□□□□ -2.36
CHD9-211ENST00000564600 CCL18P55774 89 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 PEA15Q15121 130 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 SSBP3-AS1Q7Z2R9 100 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 Q8IZM0 81 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 TP53AIP1Q9HCN2 124 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 LINC00846Q9NV44 126 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 CRIPTQ9P021 101 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 PRO0255Q9UI72 69 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 PARP14Q460N5 1801 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 MYH6P13533 1939 aa0.28□□□□□ -2.36
CHD9-211ENST00000564600 CPSF1Q10570 1443 aaKnown RBP0.28□□□□□ -2.37
CHD9-211ENST00000564600 IQSEC2Q5JU85 1478 aa0.28□□□□□ -2.37
CHD9-211ENST00000564600 PXDNQ92626 1479 aa0.28□□□□□ -2.37
CHD9-211ENST00000564600 ESPL1Q14674 2120 aa0.28□□□□□ -2.37
CHD9-211ENST00000564600 SETBP1Q9Y6X0 1596 aa0.28□□□□□ -2.37
CHD9-211ENST00000564600 LRP5O75197 1615 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 EP300Q09472 2414 aaPredicted RBP0.27□□□□□ -2.37
CHD9-211ENST00000564600 LOC285556D6RIA3 1793 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 ITPR1Q14643 2758 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 D6R8Y8 96 aa0.27□□□□□ -2.37
CHD9-211ENST00000564600 I3L3M4 83 aa0.27□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 108.2 ms