RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 UQCR10Q9UDW1 63 aa0.82□□□□□ -2.28
UBR1-205ENST00000564540 PRO1854Q9UHT4 67 aa0.82□□□□□ -2.28
UBR1-205ENST00000564540 LINC01558Q9Y6Z2 57 aa0.82□□□□□ -2.28
UBR1-205ENST00000564540 PRDM15P57071 1507 aaPredicted RBP0.82□□□□□ -2.28
UBR1-205ENST00000564540 TTC37Q6PGP7 1564 aa0.82□□□□□ -2.28
UBR1-205ENST00000564540 PI4KAP42356 2102 aa0.82□□□□□ -2.28
UBR1-205ENST00000564540 IFT172Q9UG01 1749 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 MAGI1Q96QZ7 1491 aaPredicted RBP0.81□□□□□ -2.28
UBR1-205ENST00000564540 FYCO1Q9BQS8 1478 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 ZNF236Q9UL36 1845 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 LOC285095A0A1B0GVY8 99 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 G3V318 75 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 SFT2D2O95562 160 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 SPINK9Q5DT21 86 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 C6orf52Q5T4I8 152 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 TMEM170BQ5T4T1 132 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 BAGE2Q86Y30 109 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 MYOM1P52179 1685 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 COL4A6Q14031 1691 aa0.81□□□□□ -2.28
UBR1-205ENST00000564540 ADGRL2O95490 1459 aa0.8□□□□□ -2.28
UBR1-205ENST00000564540 HMGXB3Q12766 1538 aa0.8□□□□□ -2.28
UBR1-205ENST00000564540 CDK13Q14004 1512 aaKnown RBP0.8□□□□□ -2.28
UBR1-205ENST00000564540 ARHGEF5Q12774 1597 aa0.8□□□□□ -2.28
UBR1-205ENST00000564540 A0A0D9SG42 100 aa0.8□□□□□ -2.28
UBR1-205ENST00000564540 APOC3P02656 99 aa0.8□□□□□ -2.28
UBR1-205ENST00000564540 IGLC1P0CG04 106 aa0.8□□□□□ -2.28
UBR1-205ENST00000564540 FXYD6P3P58550 94 aa0.8□□□□□ -2.28
UBR1-205ENST00000564540 CFAP126Q5VTH2 177 aa0.8□□□□□ -2.28
UBR1-205ENST00000564540 Q9H521 79 aa0.8□□□□□ -2.28
UBR1-205ENST00000564540 LINC00472Q9H8W2 130 aa0.8□□□□□ -2.28
UBR1-205ENST00000564540 F5P12259 2224 aa0.8□□□□□ -2.28
UBR1-205ENST00000564540 TROQ12816 1431 aaPredicted RBP0.8□□□□□ -2.28
UBR1-205ENST00000564540 TCHHQ07283 1943 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 LAMC3Q9Y6N6 1575 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 KDM5AP29375 1690 aaKnown RBP0.79□□□□□ -2.28
UBR1-205ENST00000564540 ATOX1O00244 68 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 UQCR11O14957 56 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 COX6CP09669 75 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 TRAPPC2P0DI81 140 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 TRAPPC2BP0DI82 140 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 NPVFQ9HCQ7 196 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 NXT2Q9NPJ8 142 aaKnown RBP0.79□□□□□ -2.28
UBR1-205ENST00000564540 FAIMQ9NVQ4 179 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 ARL2-SNX15V9GYD0 113 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 V9GYS6 101 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 NSD3Q9BZ95 1437 aa0.79□□□□□ -2.28
UBR1-205ENST00000564540 A0A0G2JND7 137 aa0.78□□□□□ -2.28
UBR1-205ENST00000564540 H7BZZ5 65 aa0.78□□□□□ -2.28
UBR1-205ENST00000564540 NDUFC1O43677 76 aa0.78□□□□□ -2.28
UBR1-205ENST00000564540 GCHFRP30047 84 aa0.78□□□□□ -2.28
UBR1-205ENST00000564540 FAUP35544 74 aaKnown RBP0.78□□□□□ -2.28
UBR1-205ENST00000564540 FAM223AQ8IWN6 122 aa0.78□□□□□ -2.28
UBR1-205ENST00000564540 C9orf62Q8N4C0 152 aa0.78□□□□□ -2.28
UBR1-205ENST00000564540 SERP2Q8N6R1 65 aa0.78□□□□□ -2.28
UBR1-205ENST00000564540 PRR15LQ9BU68 103 aa0.78□□□□□ -2.28
UBR1-205ENST00000564540 CACFD1Q9UGQ2 172 aa0.78□□□□□ -2.28
UBR1-205ENST00000564540 RAPGEF2Q9Y4G8 1499 aa0.78□□□□□ -2.28
UBR1-205ENST00000564540 EHBP1L1Q8N3D4 1523 aa0.78□□□□□ -2.28
UBR1-205ENST00000564540 TOP2BQ02880 1626 aa0.78□□□□□ -2.29
UBR1-205ENST00000564540 KNTC1P50748 2209 aa0.77□□□□□ -2.29
UBR1-205ENST00000564540 TRBV7-7A0A0K0K1E9 115 aa0.77□□□□□ -2.29
UBR1-205ENST00000564540 PVALEFA0A1B0GWK0 134 aa0.77□□□□□ -2.29
UBR1-205ENST00000564540 M0R3E3 92 aa0.77□□□□□ -2.29
UBR1-205ENST00000564540 ASIPP42127 132 aa0.77□□□□□ -2.29
UBR1-205ENST00000564540 SMIM4Q8WVI0 70 aa0.77□□□□□ -2.29
UBR1-205ENST00000564540 TRGV9Q99603 122 aa0.77□□□□□ -2.29
UBR1-205ENST00000564540 PLEKHH2Q8IVE3 1493 aa0.77□□□□□ -2.29
UBR1-205ENST00000564540 MLH3Q9UHC1 1453 aa0.77□□□□□ -2.29
UBR1-205ENST00000564540 KIF21AQ7Z4S6 1674 aa0.77□□□□□ -2.29
UBR1-205ENST00000564540 MARF1Q9Y4F3 1742 aaKnown RBP0.76□□□□□ -2.29
UBR1-205ENST00000564540 DIP2CQ9Y2E4 1556 aa0.76□□□□□ -2.29
UBR1-205ENST00000564540 FAM223BA6NKX1 122 aa0.76□□□□□ -2.29
UBR1-205ENST00000564540 SPRR4Q96PI1 79 aa0.76□□□□□ -2.29
UBR1-205ENST00000564540 C20orf78Q9BR46 151 aa0.76□□□□□ -2.29
UBR1-205ENST00000564540 C10orf95Q9H7T3 257 aa0.76□□□□□ -2.29
UBR1-205ENST00000564540 PROK2Q9HC23 129 aa0.76□□□□□ -2.29
UBR1-205ENST00000564540 BAZ1AQ9NRL2 1556 aaPredicted RBP0.75□□□□□ -2.29
UBR1-205ENST00000564540 SYS1-DBNDD2H3BUS1 97 aa0.75□□□□□ -2.29
UBR1-205ENST00000564540 SAA2P0DJI9 122 aaPredicted RBP0.75□□□□□ -2.29
UBR1-205ENST00000564540 COX17Q14061 63 aa0.75□□□□□ -2.29
UBR1-205ENST00000564540 PRO1933Q9H354 126 aa0.75□□□□□ -2.29
UBR1-205ENST00000564540 ASH1LQ9NR48 2969 aaKnown RBP0.75□□□□□ -2.29
UBR1-205ENST00000564540 KIAA1551Q9HCM1 1747 aa0.75□□□□□ -2.29
UBR1-205ENST00000564540 TRBV25-1A0A075B6N4 114 aa0.74□□□□□ -2.29
UBR1-205ENST00000564540 GYPAP02724 150 aa0.74□□□□□ -2.29
UBR1-205ENST00000564540 MGPP08493 103 aa0.74□□□□□ -2.29
UBR1-205ENST00000564540 NMBP08949 121 aa0.74□□□□□ -2.29
UBR1-205ENST00000564540 FAM103A1Q9BTL3 118 aaKnown RBP0.74□□□□□ -2.29
UBR1-205ENST00000564540 SCN7AQ01118 1682 aa0.74□□□□□ -2.29
UBR1-205ENST00000564540 BTAF1O14981 1849 aa0.73□□□□□ -2.29
UBR1-205ENST00000564540 PIN1P1O15428 100 aa0.73□□□□□ -2.29
UBR1-205ENST00000564540 NRXN1Q9ULB1 1477 aa0.73□□□□□ -2.29
UBR1-205ENST00000564540 MYO7AQ13402 2215 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 RB1CC1Q8TDY2 1594 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 UQCRHLA0A096LP55 91 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 A0A1B0GWA3 101 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 C7orf77A4D0Y5 90 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 UQCRHP07919 91 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 HAMPP81172 84 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 PMCHL1Q16048 86 aa0.72□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 167.8 ms