RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 HERVK_113P63121 156 aa8.17□□□□□ -1.1
TCF4-222ENST00000564228 C15orf32Q32M92 178 aa8.17□□□□□ -1.1
TCF4-222ENST00000564228 C16orf92Q96LL3 132 aa8.17□□□□□ -1.1
TCF4-222ENST00000564228 IGHV3-35A0A0C4DH35 117 aa8.17□□□□□ -1.1
TCF4-222ENST00000564228 C19orf54Q5BKX5 351 aa8.17□□□□□ -1.1
TCF4-222ENST00000564228 C3orf56Q8N813 242 aa8.17□□□□□ -1.1
TCF4-222ENST00000564228 ZNF702PQ9H963 129 aa8.17□□□□□ -1.1
TCF4-222ENST00000564228 IGHV3-66A0A0C4DH42 116 aa8.16□□□□□ -1.1
TCF4-222ENST00000564228 RNASE4P34096 147 aaKnown RBP8.16□□□□□ -1.1
TCF4-222ENST00000564228 MIAQ16674 131 aa8.16□□□□□ -1.1
TCF4-222ENST00000564228 CRYGAP11844 174 aa8.15□□□□□ -1.1
TCF4-222ENST00000564228 COX7CP15954 63 aa8.15□□□□□ -1.1
TCF4-222ENST00000564228 OR13C6PQ8NH95 151 aa8.15□□□□□ -1.1
TCF4-222ENST00000564228 C20orf173Q96LM9 149 aa8.15□□□□□ -1.1
TCF4-222ENST00000564228 SETD2Q9BYW2 2564 aaPredicted RBP8.15□□□□□ -1.1
TCF4-222ENST00000564228 TRBV7-1A0A0A6YYK4 115 aa8.15□□□□□ -1.11
TCF4-222ENST00000564228 TIMM17BO60830 172 aa8.15□□□□□ -1.11
TCF4-222ENST00000564228 C5orf38Q86SI9 138 aa8.15□□□□□ -1.11
TCF4-222ENST00000564228 TMEM61Q8N0U2 210 aa8.15□□□□□ -1.11
TCF4-222ENST00000564228 DCANP1Q8TF63 244 aa8.15□□□□□ -1.11
TCF4-222ENST00000564228 EEF1AKMT3Q96AZ1 226 aa8.15□□□□□ -1.11
TCF4-222ENST00000564228 MUC4Q99102 2169 aa8.15□□□□□ -1.11
TCF4-222ENST00000564228 I3L3M4 83 aa8.14□□□□□ -1.11
TCF4-222ENST00000564228 SPRY2O43597 315 aa8.14□□□□□ -1.11
TCF4-222ENST00000564228 IGHV3-30-3P0DP02 117 aa8.14□□□□□ -1.11
TCF4-222ENST00000564228 HILS1P60008 231 aa8.14□□□□□ -1.11
TCF4-222ENST00000564228 CLEC2BQ92478 149 aa8.14□□□□□ -1.11
TCF4-222ENST00000564228 TIMM21Q9BVV7 248 aa8.14□□□□□ -1.11
TCF4-222ENST00000564228 TEP1Q99973 2627 aaKnown RBP8.14□□□□□ -1.11
TCF4-222ENST00000564228 CEMP1Q6PRD7 247 aaPredicted RBP8.13□□□□□ -1.11
TCF4-222ENST00000564228 C10orf99Q6UWK7 81 aa8.13□□□□□ -1.11
TCF4-222ENST00000564228 CLEC19AQ6UXS0 136 aa8.13□□□□□ -1.11
TCF4-222ENST00000564228 FAM19A5Q7Z5A7 132 aaPredicted RBP8.13□□□□□ -1.11
TCF4-222ENST00000564228 PEMTQ9UBM1 199 aa8.13□□□□□ -1.11
TCF4-222ENST00000564228 SOCS3O14543 225 aa8.13□□□□□ -1.11
TCF4-222ENST00000564228 GNRH2O43555 120 aa8.13□□□□□ -1.11
TCF4-222ENST00000564228 RNASE1P07998 156 aaKnown RBP8.13□□□□□ -1.11
TCF4-222ENST00000564228 HIST1H4AP62805 103 aaKnown RBP8.13□□□□□ -1.11
TCF4-222ENST00000564228 CFHR3Q02985 330 aa8.13□□□□□ -1.11
TCF4-222ENST00000564228 Q6ZSV7 163 aa8.13□□□□□ -1.11
TCF4-222ENST00000564228 C20orf203Q8NBC4 194 aa8.13□□□□□ -1.11
TCF4-222ENST00000564228 IGLV4-3A0A075B6K6 122 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 IGHV3OR16-13A0A075B7E8 117 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 IGHV3-74A0A0B4J1X5 117 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 A0A0J9YXV3 536 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 FAM223BA6NKX1 122 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 H3BUA1 57 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 ATOX1O00244 68 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 IGLV1-40P01703 118 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 LCE2DQ5TA82 110 aaPredicted RBP8.12□□□□□ -1.11
TCF4-222ENST00000564228 FAM223AQ8IWN6 122 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 Q8N2B8 174 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 SMCR5Q8TEV8 140 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 ZNF580Q9UK33 172 aa8.12□□□□□ -1.11
TCF4-222ENST00000564228 LOC107984640A0A0U1RRK4 108 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 IGHV3-11P01762 117 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 PRSS2P07478 247 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 MRPS36P82909 103 aaKnown RBP8.11□□□□□ -1.11
TCF4-222ENST00000564228 GAGE2AQ6NT46 116 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 DAND5Q8N907 189 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 C2orf48Q96LS8 159 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 PYGO1Q9Y3Y4 419 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 MAST4O15021 2626 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 IGHV3-64A0A075B6Q5 118 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 IGHV3-49A0A0A0MS15 119 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 TRAV8-3A0A0A6YYJ7 113 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 TRAV25A0A0B4J276 109 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 IGHV1-58A0A0C4DH39 117 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 CITED2Q99967 270 aaPredicted RBP8.11□□□□□ -1.11
TCF4-222ENST00000564228 NDUFA12Q9UI09 145 aa8.11□□□□□ -1.11
TCF4-222ENST00000564228 NIPBLQ6KC79 2804 aaeCLIP8.1□□□□□ -1.11
TCF4-222ENST00000564228 F5H697 171 aa8.1□□□□□ -1.11
TCF4-222ENST00000564228 PSMB8P28062 276 aa8.1□□□□□ -1.11
TCF4-222ENST00000564228 ADAMTSL4-AS1Q5T5F5 129 aa8.1□□□□□ -1.11
TCF4-222ENST00000564228 JMJD1CQ15652 2540 aa8.1□□□□□ -1.11
TCF4-222ENST00000564228 C2CD3Q4AC94 2353 aa8.1□□□□□ -1.11
TCF4-222ENST00000564228 M0QY20 66 aa8.09□□□□□ -1.11
TCF4-222ENST00000564228 COX7A2LO14548 114 aa8.09□□□□□ -1.11
TCF4-222ENST00000564228 FAM222AQ5U5X8 452 aa8.09□□□□□ -1.11
TCF4-222ENST00000564228 USMG5Q96IX5 58 aa8.09□□□□□ -1.11
TCF4-222ENST00000564228 OPRPNQ99935 248 aaPredicted RBP8.09□□□□□ -1.11
TCF4-222ENST00000564228 KLLNB2CW77 178 aa8.09□□□□□ -1.11
TCF4-222ENST00000564228 TRACP01848 142 aa8.09□□□□□ -1.11
TCF4-222ENST00000564228 TMEM258P61165 79 aa8.09□□□□□ -1.11
TCF4-222ENST00000564228 TRBV12-3P01733 135 aa8.08□□□□□ -1.12
TCF4-222ENST00000564228 INAFM2P0DMQ5 153 aa8.08□□□□□ -1.12
TCF4-222ENST00000564228 VSIG2Q96IQ7 327 aa8.08□□□□□ -1.12
TCF4-222ENST00000564228 A0A087WWL8 130 aa8.07□□□□□ -1.12
TCF4-222ENST00000564228 KHDC1LQ5JSQ8 128 aa8.07□□□□□ -1.12
TCF4-222ENST00000564228 C9orf85Q96MD7 179 aa8.07□□□□□ -1.12
TCF4-222ENST00000564228 JPT2Q9H910 190 aa8.07□□□□□ -1.12
TCF4-222ENST00000564228 KLK5Q9Y337 293 aaPredicted RBP8.07□□□□□ -1.12
TCF4-222ENST00000564228 TINCRA0A1B0GVN0 87 aa8.07□□□□□ -1.12
TCF4-222ENST00000564228 TMEM89A2RUT3 159 aa8.07□□□□□ -1.12
TCF4-222ENST00000564228 HIST2H2BDQ6DRA6 164 aa8.07□□□□□ -1.12
TCF4-222ENST00000564228 LINC01006Q8NI28 216 aa8.07□□□□□ -1.12
TCF4-222ENST00000564228 WNK1Q9H4A3 2382 aa8.06□□□□□ -1.12
TCF4-222ENST00000564228 ADARB2-AS1A8MUL3 147 aa8.06□□□□□ -1.12
TCF4-222ENST00000564228 COPS9Q8WXC6 57 aa8.06□□□□□ -1.12
TCF4-222ENST00000564228 EDA2RQ9HAV5 297 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms