RNA–Protein interactions for RNA: ENST00000563130.5

CNOT1-204, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 2

Gene CNOT1, Length 2,280 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-204ENST00000563130 DEFB104AQ8WTQ1 72 aa4.12□□□□□ -1.75
CNOT1-204ENST00000563130 ALKBH7Q9BT30 221 aaPredicted RBP4.12□□□□□ -1.75
CNOT1-204ENST00000563130 TMEM243Q9BU79 118 aa4.12□□□□□ -1.75
CNOT1-204ENST00000563130 Q9HAA7 133 aa4.12□□□□□ -1.75
CNOT1-204ENST00000563130 ST20Q9HBF5 79 aa4.12□□□□□ -1.75
CNOT1-204ENST00000563130 PRR34Q9NV39 138 aa4.12□□□□□ -1.75
CNOT1-204ENST00000563130 A0A087WTM6 91 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 ESDP10768 282 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 SUMO2P61956 95 aaKnown RBP4.11□□□□□ -1.75
CNOT1-204ENST00000563130 GAGE6Q13070 117 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 MAPKAPK5-AS1Q8N8E1 139 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 C20orf203Q8NBC4 194 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 BTF3L4Q96K17 158 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 LRP1BQ9NZR2 4599 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 KIAA1109Q2LD37 5005 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 C7orf77A4D0Y5 90 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 TSHBP01222 138 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 AMTP48728 403 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 RPL32P62910 135 aaKnown RBP4.11□□□□□ -1.75
CNOT1-204ENST00000563130 Q0VG73 95 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 UBE2WQ96B02 151 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 C20orf78Q9BR46 151 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 KRTAP4-9Q9BYQ8 210 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 COX11Q9Y6N1 276 aa4.11□□□□□ -1.75
CNOT1-204ENST00000563130 IGLV4-60A0A075B6I1 120 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 TRAV9-1A0A075B6T8 112 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 D6R8Y8 96 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 H7C423 109 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 VCYO14598 125 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 PHOX2AO14813 284 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 PPBPP02775 128 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 ANGP03950 147 aaKnown RBP4.1□□□□□ -1.75
CNOT1-204ENST00000563130 PMCHP20382 165 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 CKS2P33552 79 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 RHEBQ15382 184 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 TM2D2Q9BX73 214 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 APCSP02743 223 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 GCSHP23434 173 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 MIAQ16674 131 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 SPATA12Q7Z6I5 190 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 KRTAP9-3Q9BYQ3 159 aa4.1□□□□□ -1.75
CNOT1-204ENST00000563130 PSCAO43653 123 aa4.09□□□□□ -1.75
CNOT1-204ENST00000563130 NPYP01303 97 aa4.09□□□□□ -1.75
CNOT1-204ENST00000563130 KRTAP26-1Q6PEX3 210 aa4.09□□□□□ -1.75
CNOT1-204ENST00000563130 TMEM136Q6ZRR5 245 aa4.09□□□□□ -1.75
CNOT1-204ENST00000563130 ORMDL3Q8N138 153 aa4.09□□□□□ -1.75
CNOT1-204ENST00000563130 LINC00269Q8N2A0 174 aa4.09□□□□□ -1.75
CNOT1-204ENST00000563130 RMI2Q96E14 147 aa4.09□□□□□ -1.75
CNOT1-204ENST00000563130 IGKV2D-24A0A075B6R9 120 aa4.09□□□□□ -1.76
CNOT1-204ENST00000563130 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.09□□□□□ -1.76
CNOT1-204ENST00000563130 IGKV2-29A2NJV5 120 aaPredicted RBP4.09□□□□□ -1.76
CNOT1-204ENST00000563130 UBE2L6O14933 153 aa4.09□□□□□ -1.76
CNOT1-204ENST00000563130 CRPP02741 224 aa4.09□□□□□ -1.76
CNOT1-204ENST00000563130 FGF6P10767 208 aa4.09□□□□□ -1.76
CNOT1-204ENST00000563130 REG3AQ06141 175 aa4.09□□□□□ -1.76
CNOT1-204ENST00000563130 WFDC2Q14508 124 aa4.09□□□□□ -1.76
CNOT1-204ENST00000563130 MRPL52Q86TS9 123 aaKnown RBP4.09□□□□□ -1.76
CNOT1-204ENST00000563130 KIR2DL4Q99706 377 aa4.09□□□□□ -1.76
CNOT1-204ENST00000563130 SMIM2Q9BVW6 85 aa4.09□□□□□ -1.76
CNOT1-204ENST00000563130 LAMTOR2Q9Y2Q5 125 aa4.09□□□□□ -1.76
CNOT1-204ENST00000563130 TRIAP1O43715 76 aa4.08□□□□□ -1.76
CNOT1-204ENST00000563130 APOC3P02656 99 aa4.08□□□□□ -1.76
CNOT1-204ENST00000563130 ZNF25P17030 456 aaPredicted RBP4.08□□□□□ -1.76
CNOT1-204ENST00000563130 SVBPQ8N300 66 aa4.08□□□□□ -1.76
CNOT1-204ENST00000563130 Q8N814 137 aa4.08□□□□□ -1.76
CNOT1-204ENST00000563130 PRELID3AQ96N28 172 aa4.08□□□□□ -1.76
CNOT1-204ENST00000563130 GEMIN7Q9H840 131 aaKnown RBP4.08□□□□□ -1.76
CNOT1-204ENST00000563130 RPS10P5Q9NQ39 176 aa4.08□□□□□ -1.76
CNOT1-204ENST00000563130 RYR1P21817 5038 aa4.08□□□□□ -1.76
CNOT1-204ENST00000563130 A0A0A0MQY5 61 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 TRAV8-4A0A0B4J246 113 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 C16orf90A8MZG2 172 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 SNAPINO95295 136 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 S100PP25815 95 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 CLPSL2Q6UWE3 100 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 CBY1Q9Y3M2 126 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 CSDC2Q9Y534 153 aaKnown RBP4.07□□□□□ -1.76
CNOT1-204ENST00000563130 HERC2O95714 4834 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 TCAPO15273 167 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 FCER1GP30273 86 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 NDUFA5Q16718 116 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 BAALCQ8WXS3 180 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 GNB1LQ9BYB4 327 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 CDC42SE2Q9NRR3 84 aa4.07□□□□□ -1.76
CNOT1-204ENST00000563130 KRTAP23-1A1A580 65 aa4.06□□□□□ -1.76
CNOT1-204ENST00000563130 PRYO14603 147 aa4.06□□□□□ -1.76
CNOT1-204ENST00000563130 HLA-DQA1P01909 254 aa4.06□□□□□ -1.76
CNOT1-204ENST00000563130 FUSP35637 526 aaKnown RBP eCLIP4.06□□□□□ -1.76
CNOT1-204ENST00000563130 COX19Q49B96 90 aa4.06□□□□□ -1.76
CNOT1-204ENST00000563130 LCE5AQ5TCM9 118 aa4.06□□□□□ -1.76
CNOT1-204ENST00000563130 AMMECR1LQ6DCA0 310 aa4.06□□□□□ -1.76
CNOT1-204ENST00000563130 RNASEKQ6P5S7 137 aaKnown RBP4.06□□□□□ -1.76
CNOT1-204ENST00000563130 NTN5Q8WTR8 489 aaPredicted RBP4.06□□□□□ -1.76
CNOT1-204ENST00000563130 UBE2D4Q9Y2X8 147 aa4.06□□□□□ -1.76
CNOT1-204ENST00000563130 APOBP04114 4563 aaKnown RBP4.06□□□□□ -1.76
CNOT1-204ENST00000563130 LECT2O14960 151 aa4.06□□□□□ -1.76
CNOT1-204ENST00000563130 OR5A1Q8NGJ0 315 aa4.06□□□□□ -1.76
CNOT1-204ENST00000563130 FAM104AQ969W3 186 aa4.06□□□□□ -1.76
CNOT1-204ENST00000563130 TIMM21Q9BVV7 248 aa4.06□□□□□ -1.76
CNOT1-204ENST00000563130 IGLV10-54A0A075B6I4 117 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms