RNA–Protein interactions for RNA: ENST00000561726.1

TNRC6A-208, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 4

Gene TNRC6A, Length 543 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-208ENST00000561726 DNAL4O96015 105 aa1.85□□□□□ -2.11
TNRC6A-208ENST00000561726 SFTA3P0C7M3 94 aa1.85□□□□□ -2.11
TNRC6A-208ENST00000561726 CCL3L1P16619 93 aa1.85□□□□□ -2.11
TNRC6A-208ENST00000561726 C6orf201Q7Z4U5 140 aa1.85□□□□□ -2.11
TNRC6A-208ENST00000561726 CEP192Q8TEP8 1941 aa1.85□□□□□ -2.11
TNRC6A-208ENST00000561726 HMGXB3Q12766 1538 aa1.85□□□□□ -2.11
TNRC6A-208ENST00000561726 LMTK2Q8IWU2 1503 aa1.85□□□□□ -2.11
TNRC6A-208ENST00000561726 MED12Q93074 2177 aa1.85□□□□□ -2.11
TNRC6A-208ENST00000561726 RGPD8O14715 1765 aaPredicted RBP1.85□□□□□ -2.11
TNRC6A-208ENST00000561726 RGPD5Q99666 1765 aa1.85□□□□□ -2.11
TNRC6A-208ENST00000561726 UBR1Q8IWV7 1749 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 IGLV3-32A0A0A0MS00 114 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 IGKV3D-7A0A0C4DH55 119 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 IGKV3OR2-268A0A0C4DH90 116 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 FXYD1O00168 92 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 LEPROTL1O95214 131 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 ARMS2P0C7Q2 107 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 RNASE3P12724 160 aaKnown RBP1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 KRTAP10-1P60331 282 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 PLGLAQ15195 96 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 KRTAP13-2Q52LG2 175 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 FAM74A4Q5TZK3 123 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 TMEM14CQ9P0S9 112 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 R4GMQ9 66 aa1.84□□□□□ -2.11
TNRC6A-208ENST00000561726 RGPD2P0DJD1 1756 aa1.84□□□□□ -2.12
TNRC6A-208ENST00000561726 CR1P17927 2039 aa1.84□□□□□ -2.12
TNRC6A-208ENST00000561726 SHANK1Q9Y566 2161 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 ZNF142P52746 1687 aaPredicted RBP1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 COL4A4P53420 1690 aaPredicted RBP1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 RTTNQ86VV8 2226 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 ABCA4P78363 2273 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 BRWD1Q9NSI6 2320 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 GPR179Q6PRD1 2367 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 IGKV1-17P01599 117 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 COX8AP10176 69 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 SPINT3P49223 89 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 LCE1CQ5T751 118 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 LCE1BQ5T7P3 118 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 PRR9Q5T870 116 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 AMELXQ99217 191 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 DIP2CQ9Y2E4 1556 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 PRRC2BQ5JSZ5 2229 aaKnown RBP1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 NRXN2Q9P2S2 1712 aa1.83□□□□□ -2.12
TNRC6A-208ENST00000561726 KDM3BQ7LBC6 1761 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 EHBP1L1Q8N3D4 1523 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 LRRC37A3O60309 1634 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 PREX2Q70Z35 1606 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 TRGV4A0A0C4DH28 118 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 IGKV2-24A0A0C4DH68 120 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 D6R8Y8 96 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 F8VRH5 84 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 GCHFRP30047 84 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 LINC00315P59091 139 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 RPL37AP61513 92 aaKnown RBP1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 Q6JHZ5 121 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 SMIM5Q71RC9 77 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 DEFB132Q7Z7B7 95 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 MUSTN1Q8IVN3 82 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 PPP1R1CQ8WVI7 109 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 PRR15LQ9BU68 103 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 TTTY12Q9BZ98 90 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 PROK2Q9HC23 129 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 V9GYV3 84 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 CTTNBP2Q8WZ74 1663 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 FREM1Q5H8C1 2179 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 ALPK2Q86TB3 2170 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 SIP14410 1827 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 MRC1P22897 1456 aa1.82□□□□□ -2.12
TNRC6A-208ENST00000561726 MDC1Q14676 2089 aaKnown RBP1.81□□□□□ -2.12
TNRC6A-208ENST00000561726 NBDYA0A0U1RRE5 68 aa1.81□□□□□ -2.12
TNRC6A-208ENST00000561726 M0R3E3 92 aa1.81□□□□□ -2.12
TNRC6A-208ENST00000561726 IGLV3-19P01714 112 aa1.81□□□□□ -2.12
TNRC6A-208ENST00000561726 CCL18P55774 89 aa1.81□□□□□ -2.12
TNRC6A-208ENST00000561726 LINC01558Q9Y6Z2 57 aa1.81□□□□□ -2.12
TNRC6A-208ENST00000561726 AFDNP55196 1824 aaKnown RBP1.81□□□□□ -2.12
TNRC6A-208ENST00000561726 PDCD11Q14690 1871 aaKnown RBP1.81□□□□□ -2.12
TNRC6A-208ENST00000561726 TARBP1Q13395 1621 aaKnown RBP1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 ARFGEF2Q9Y6D5 1785 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 IGKV2-40A0A087WW87 121 aaPredicted RBP1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 M0R135 149 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 IGKV2D-40P01614 121 aaPredicted RBP1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 IL9P15248 144 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 FXYD4P59646 89 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 FXYD3Q14802 87 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 LINC00322Q6ZN03 302 aaPredicted RBP1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 COA5Q86WW8 74 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 BAGE2Q86Y30 109 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 ZNF563Q8TA94 476 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 HILPDAQ9Y5L2 63 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 ASXL1Q8IXJ9 1541 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 MYOM1P52179 1685 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 DLEC1Q9Y238 1755 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 LAMA4Q16363 1823 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 GBF1Q92538 1859 aa1.8□□□□□ -2.12
TNRC6A-208ENST00000561726 DOCK10Q96BY6 2186 aa1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 TRBV6-5A0A0K0K1A5 114 aa1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 CTXND1A0A1B0GTU2 59 aa1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 IGKV2-29A2NJV5 120 aaPredicted RBP1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 INE1O15225 51 aa1.79□□□□□ -2.12
TNRC6A-208ENST00000561726 PRB2P02812 416 aaPredicted RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 125 ms