RNA–Protein interactions for RNA: ENST00000561326.5

USP3-219, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 4

Gene USP3, Length 543 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-219ENST00000561326 C2orf88Q9BSF0 95 aa7.14□□□□□ -1.27
USP3-219ENST00000561326 CST9LQ9H4G1 147 aa7.14□□□□□ -1.27
USP3-219ENST00000561326 CHTOPQ9Y3Y2 248 aaKnown RBP7.14□□□□□ -1.27
USP3-219ENST00000561326 DNAH9Q9NYC9 4486 aa7.13□□□□□ -1.27
USP3-219ENST00000561326 MEGF8Q7Z7M0 2845 aa7.13□□□□□ -1.27
USP3-219ENST00000561326 A0A1B0GUV1 79 aa7.13□□□□□ -1.27
USP3-219ENST00000561326 DPM2O94777 84 aa7.13□□□□□ -1.27
USP3-219ENST00000561326 PLNP26678 52 aa7.13□□□□□ -1.27
USP3-219ENST00000561326 GAGE6Q13070 117 aa7.13□□□□□ -1.27
USP3-219ENST00000561326 ODF1Q14990 250 aa7.13□□□□□ -1.27
USP3-219ENST00000561326 CEMP1Q6PRD7 247 aaPredicted RBP7.13□□□□□ -1.27
USP3-219ENST00000561326 ZNF664Q8N3J9 261 aa7.13□□□□□ -1.27
USP3-219ENST00000561326 OPRPNQ99935 248 aaPredicted RBP7.13□□□□□ -1.27
USP3-219ENST00000561326 STAB2Q8WWQ8 2551 aa7.13□□□□□ -1.27
USP3-219ENST00000561326 IGLL5B9A064 214 aa7.12□□□□□ -1.27
USP3-219ENST00000561326 F8VRH5 84 aa7.12□□□□□ -1.27
USP3-219ENST00000561326 IGKCP01834 107 aa7.12□□□□□ -1.27
USP3-219ENST00000561326 AMELXQ99217 191 aa7.12□□□□□ -1.27
USP3-219ENST00000561326 PMCHL2Q9BQD1 86 aa7.12□□□□□ -1.27
USP3-219ENST00000561326 VAMP8Q9BV40 100 aa7.12□□□□□ -1.27
USP3-219ENST00000561326 CDC42SE2Q9NRR3 84 aa7.12□□□□□ -1.27
USP3-219ENST00000561326 MRPL35Q9NZE8 188 aaKnown RBP7.12□□□□□ -1.27
USP3-219ENST00000561326 TRAV9-2A0A087WT02 112 aa7.11□□□□□ -1.27
USP3-219ENST00000561326 SEC11AP67812 179 aa7.11□□□□□ -1.27
USP3-219ENST00000561326 KLK5Q9Y337 293 aaPredicted RBP7.11□□□□□ -1.27
USP3-219ENST00000561326 NUPR2A6NF83 97 aa7.1□□□□□ -1.27
USP3-219ENST00000561326 CCL18P55774 89 aa7.1□□□□□ -1.27
USP3-219ENST00000561326 Q6ZUT4 128 aa7.1□□□□□ -1.27
USP3-219ENST00000561326 ATOH7Q8N100 152 aa7.1□□□□□ -1.27
USP3-219ENST00000561326 TCTAP57738 103 aa7.09□□□□□ -1.27
USP3-219ENST00000561326 RBX1P62877 108 aa7.09□□□□□ -1.27
USP3-219ENST00000561326 ESRGQ1W209 222 aa7.09□□□□□ -1.27
USP3-219ENST00000561326 ZC2HC1BQ5TFG8 222 aa7.09□□□□□ -1.27
USP3-219ENST00000561326 GEMIN7Q9H840 131 aaKnown RBP7.09□□□□□ -1.27
USP3-219ENST00000561326 CCL25O15444 150 aa7.08□□□□□ -1.28
USP3-219ENST00000561326 RNASE13Q5GAN3 156 aaKnown RBP7.08□□□□□ -1.28
USP3-219ENST00000561326 NFE4Q86UQ8 179 aa7.08□□□□□ -1.28
USP3-219ENST00000561326 FAM104AQ969W3 186 aa7.08□□□□□ -1.28
USP3-219ENST00000561326 PAM16Q9Y3D7 125 aa7.08□□□□□ -1.28
USP3-219ENST00000561326 IGLV4-60A0A075B6I1 120 aa7.07□□□□□ -1.28
USP3-219ENST00000561326 A0A0J9YXV3 536 aa7.07□□□□□ -1.28
USP3-219ENST00000561326 TINCRA0A1B0GVN0 87 aa7.07□□□□□ -1.28
USP3-219ENST00000561326 ANGP03950 147 aaKnown RBP7.07□□□□□ -1.28
USP3-219ENST00000561326 IGLC3P0DOY3 106 aa7.07□□□□□ -1.28
USP3-219ENST00000561326 UBE2D1P51668 147 aa7.07□□□□□ -1.28
USP3-219ENST00000561326 HERVK_113P61574 105 aa7.07□□□□□ -1.28
USP3-219ENST00000561326 HERVK_113P63121 156 aa7.07□□□□□ -1.28
USP3-219ENST00000561326 SPATA45Q537H7 98 aa7.07□□□□□ -1.28
USP3-219ENST00000561326 MPV17L2Q567V2 206 aa7.07□□□□□ -1.28
USP3-219ENST00000561326 CDPF1Q6NVV7 123 aa7.07□□□□□ -1.28
USP3-219ENST00000561326 IGLV4-69A0A075B6H9 119 aa7.06□□□□□ -1.28
USP3-219ENST00000561326 TRAV13-1A0A0B4J241 112 aa7.06□□□□□ -1.28
USP3-219ENST00000561326 hDV102S1A0JD36 115 aa7.06□□□□□ -1.28
USP3-219ENST00000561326 TSTD3H0UI37 97 aa7.06□□□□□ -1.28
USP3-219ENST00000561326 SS18Q15532 418 aa7.06□□□□□ -1.28
USP3-219ENST00000561326 TMEM170BQ5T4T1 132 aa7.06□□□□□ -1.28
USP3-219ENST00000561326 CHAC1Q9BUX1 264 aa7.06□□□□□ -1.28
USP3-219ENST00000561326 IGKV3OR2-268A0A0C4DH90 116 aa7.05□□□□□ -1.28
USP3-219ENST00000561326 C11orf86A6NJI1 115 aa7.05□□□□□ -1.28
USP3-219ENST00000561326 H3BRM9 83 aa7.05□□□□□ -1.28
USP3-219ENST00000561326 FAM19A3Q7Z5A8 133 aa7.05□□□□□ -1.28
USP3-219ENST00000561326 STPG4Q8N801 248 aa7.05□□□□□ -1.28
USP3-219ENST00000561326 MRPS16Q9Y3D3 137 aaKnown RBP7.05□□□□□ -1.28
USP3-219ENST00000561326 PRKDCP78527 4128 aaKnown RBP7.04□□□□□ -1.28
USP3-219ENST00000561326 LINC00959A0A1B0GUT2 108 aa7.04□□□□□ -1.28
USP3-219ENST00000561326 REG3AQ06141 175 aa7.04□□□□□ -1.28
USP3-219ENST00000561326 MAJINQ3KP22 176 aa7.04□□□□□ -1.28
USP3-219ENST00000561326 LINC01556Q5JQF7 62 aa7.04□□□□□ -1.28
USP3-219ENST00000561326 WFDC10BQ8IUB3 73 aa7.04□□□□□ -1.28
USP3-219ENST00000561326 LINC00269Q8N2A0 174 aa7.04□□□□□ -1.28
USP3-219ENST00000561326 LINC00469Q8N7U9 141 aa7.04□□□□□ -1.28
USP3-219ENST00000561326 APLNQ9ULZ1 77 aa7.04□□□□□ -1.28
USP3-219ENST00000561326 SIVA1O15304 175 aa7.03□□□□□ -1.28
USP3-219ENST00000561326 IGHV3-30P01768 117 aa7.03□□□□□ -1.28
USP3-219ENST00000561326 IGHV3-33P01772 117 aa7.03□□□□□ -1.28
USP3-219ENST00000561326 IGHV3-30-3P0DP02 117 aa7.03□□□□□ -1.28
USP3-219ENST00000561326 IGHV3-30-5P0DP03 117 aa7.03□□□□□ -1.28
USP3-219ENST00000561326 LINC00242Q5T6M2 205 aa7.03□□□□□ -1.28
USP3-219ENST00000561326 UBE2DNLQ8IWF7 75 aa7.03□□□□□ -1.28
USP3-219ENST00000561326 KLK12Q9UKR0 248 aa7.03□□□□□ -1.28
USP3-219ENST00000561326 LINC00588Q9Y4M8 146 aa7.03□□□□□ -1.28
USP3-219ENST00000561326 TRAV8-4A0A0B4J246 113 aa7.02□□□□□ -1.29
USP3-219ENST00000561326 CRPP02741 224 aa7.02□□□□□ -1.29
USP3-219ENST00000561326 DNAH10OSP0CZ25 163 aa7.02□□□□□ -1.29
USP3-219ENST00000561326 ZNF22P17026 224 aaPredicted RBP7.02□□□□□ -1.29
USP3-219ENST00000561326 UPK3BQ9BT76 320 aa7.02□□□□□ -1.29
USP3-219ENST00000561326 PRO1933Q9H354 126 aa7.02□□□□□ -1.29
USP3-219ENST00000561326 TGP01266 2768 aa7.02□□□□□ -1.29
USP3-219ENST00000561326 IGLV5-45A0A087WSX0 123 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 TMEM223A0PJW6 202 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 E9PLD3 99 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 K7EP13 123 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 NMUP48645 174 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 COX6A2Q02221 97 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 ANKRD39Q53RE8 183 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 MUC7Q8TAX7 377 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 PLEKHB2Q96CS7 222 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 C14orf144Q96I85 54 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 WWC2-AS2Q96NR7 200 aa7.01□□□□□ -1.29
USP3-219ENST00000561326 PRR34Q9NV39 138 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms