RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 ZFAND2AQ8N6M9 145 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 Q8TAT8 98 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 TMEM263Q8WUH6 116 aaKnown RBP4.84□□□□□ -1.63
SPG11-224ENST00000561268 TMEM141Q96I45 108 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 CHAC1Q9BUX1 264 aa4.84□□□□□ -1.63
SPG11-224ENST00000561268 IGHV3OR16-12A0A075B7B8 117 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 TMSB15BA0A087X1C1 80 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 KLLNB2CW77 178 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 E9PLD3 99 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 RTL8CO15255 209 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 ERCC8Q13216 396 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 C15orf53Q8NAA6 179 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 NEXN-AS1Q8NBZ9 246 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 C16orf74Q96GX8 76 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 TIMM17AQ99595 171 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 C11orf21Q9P2W6 132 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 TP73-AS1Q9UF72 201 aa4.83□□□□□ -1.64
SPG11-224ENST00000561268 HERC2O95714 4834 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 DNAH11Q96DT5 4516 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 PRAC2D3DTV9 90 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 NMUP48645 174 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 DAD1P61803 113 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 ZC2HC1BQ5TFG8 222 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 ATP6V0E2Q8NHE4 81 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 PTH2Q96A98 100 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 C18orf15Q96N68 181 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 LINC00467Q9BRT7 94 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 VCX2Q9H322 139 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 MSRB1Q9NZV6 116 aa4.82□□□□□ -1.64
SPG11-224ENST00000561268 DYNC1H1Q14204 4646 aaKnown RBP4.81□□□□□ -1.64
SPG11-224ENST00000561268 PKD1P98161 4303 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 TRAV12-2A0A075B6T6 113 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 TRBV27A0A0K0K1C4 114 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 MYMXA0A1B0GTQ4 84 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 H3BUT2 72 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 M0QXV9 152 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 GHRHP01286 108 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 AZU1P20160 251 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 EMP1P54849 157 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 PCP2Q8IVA1 136 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 SPANXB1Q9NS25 103 aaPredicted RBP4.81□□□□□ -1.64
SPG11-224ENST00000561268 MRPL35Q9NZE8 188 aaKnown RBP4.81□□□□□ -1.64
SPG11-224ENST00000561268 PHLDA3Q9Y5J5 127 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 SPCS1Q9Y6A9 102 aa4.81□□□□□ -1.64
SPG11-224ENST00000561268 KIAA1109Q2LD37 5005 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 TRBV7-3A0A075B6L6 115 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 C11orf86A6NJI1 115 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 SMKR1H3BMG3 65 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 H3BNG1 76 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 VCYO14598 125 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 PRM2P04554 102 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 POLR2KP53803 58 aaKnown RBP4.8□□□□□ -1.64
SPG11-224ENST00000561268 HERVK_113P61574 105 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 DAZ2Q13117 558 aaKnown RBP4.8□□□□□ -1.64
SPG11-224ENST00000561268 RHOHQ15669 191 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 C11orf72Q8NBR9 251 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 RASL10AQ92737 203 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 VPS25Q9BRG1 176 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 CYSLTR1Q9Y271 337 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 TIMM8BQ9Y5J9 83 aaPredicted RBP4.8□□□□□ -1.64
SPG11-224ENST00000561268 KIF25-AS1Q9Y6Z4 181 aa4.8□□□□□ -1.64
SPG11-224ENST00000561268 TRBV20-1A0A075B6N2 111 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 IGKV2D-26A0A0A0MRZ7 120 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 H3BVH4 76 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 ATP5G1P05496 136 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 RNASE3P12724 160 aaKnown RBP4.79□□□□□ -1.64
SPG11-224ENST00000561268 S100A4P26447 101 aaKnown RBP4.79□□□□□ -1.64
SPG11-224ENST00000561268 LINC00315P59091 139 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 C2orf66Q6UXQ4 117 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 Q6ZVH6 145 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 NFE4Q86UQ8 179 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 SYT8Q8NBV8 401 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 ZNRF2Q8NHG8 242 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 LINC01600Q96MT4 127 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 SCGB3A1Q96QR1 104 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 KIR2DL4Q99706 377 aa4.79□□□□□ -1.64
SPG11-224ENST00000561268 IGIPA6NJ69 53 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 GCSHP23434 173 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 UBE2D1P51668 147 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 FXYD2P54710 66 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 PMVKQ15126 192 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 ANXA2RQ3ZCQ2 193 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 FAM159AQ6UWV7 190 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 BAALCQ8WXS3 180 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 ZNF479Q96JC4 524 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 C9orf85Q96MD7 179 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 UPK3BQ9BT76 320 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 PYGO1Q9Y3Y4 419 aa4.78□□□□□ -1.64
SPG11-224ENST00000561268 PRSS29PA6NIE9 313 aa4.77□□□□□ -1.65
SPG11-224ENST00000561268 H3BMG7 143 aa4.77□□□□□ -1.65
SPG11-224ENST00000561268 PRB4P10163 310 aaPredicted RBP4.77□□□□□ -1.65
SPG11-224ENST00000561268 HTN3P15516 51 aa4.77□□□□□ -1.65
SPG11-224ENST00000561268 ZNF876PQ49A33 203 aa4.77□□□□□ -1.65
SPG11-224ENST00000561268 PRR9Q5T870 116 aa4.77□□□□□ -1.65
SPG11-224ENST00000561268 UBE2DNLQ8IWF7 75 aa4.77□□□□□ -1.65
SPG11-224ENST00000561268 LINC01587Q99440 93 aa4.77□□□□□ -1.65
SPG11-224ENST00000561268 HIST1H4GQ99525 98 aa4.77□□□□□ -1.65
SPG11-224ENST00000561268 PPDPFQ9H3Y8 114 aa4.77□□□□□ -1.65
SPG11-224ENST00000561268 NOP10Q9NPE3 64 aaKnown RBP4.77□□□□□ -1.65
SPG11-224ENST00000561268 MDFICQ9P1T7 246 aa4.77□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms