RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 YPEL4Q96NS1 127 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 TMEM191AQ9H0A3 160 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 DPH3P1Q9H4G8 78 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 DHRS4-AS1Q9P1J3 65 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 NAT8BQ9UHF3 227 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 MRPS16Q9Y3D3 137 aaKnown RBP4.01□□□□□ -1.77
LRRC28-220ENST00000561253 ICOSQ9Y6W8 199 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 BIRC6Q9NR09 4857 aa4.01□□□□□ -1.77
LRRC28-220ENST00000561253 APOBP04114 4563 aaKnown RBP4□□□□□ -1.77
LRRC28-220ENST00000561253 TRAV9-2A0A087WT02 112 aa4□□□□□ -1.77
LRRC28-220ENST00000561253 TRAV26-2A0A0B4J265 109 aa4□□□□□ -1.77
LRRC28-220ENST00000561253 C7orf77A4D0Y5 90 aa4□□□□□ -1.77
LRRC28-220ENST00000561253 TRGC1P0CF51 173 aa4□□□□□ -1.77
LRRC28-220ENST00000561253 RAB4AP20338 218 aa4□□□□□ -1.77
LRRC28-220ENST00000561253 NEGR1Q7Z3B1 354 aa4□□□□□ -1.77
LRRC28-220ENST00000561253 IMMP2LQ96T52 175 aa4□□□□□ -1.77
LRRC28-220ENST00000561253 PRADC1Q9BSG0 188 aa4□□□□□ -1.77
LRRC28-220ENST00000561253 TMEM242Q9NWH2 141 aa4□□□□□ -1.77
LRRC28-220ENST00000561253 TRBV7-3A0A075B6L6 115 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 TRBV6-5A0A0K0K1A5 114 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 A0A1B0GW15 77 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 SRIP30626 198 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 RPS10P46783 165 aaKnown RBP3.99□□□□□ -1.77
LRRC28-220ENST00000561253 HBBP68871 147 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 RHEBQ15382 184 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 ZNF56Q15929 161 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 FAM104BQ5XKR9 115 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 NTM-AS1Q6ZSK4 140 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 SH2D6Q7Z4S9 175 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 ATP5L2Q7Z4Y8 100 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 AMN1Q8IY45 258 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 FRZBQ92765 325 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 GTSF1LQ9H1H1 148 aa3.99□□□□□ -1.77
LRRC28-220ENST00000561253 TRAV9-1A0A075B6T8 112 aa3.98□□□□□ -1.77
LRRC28-220ENST00000561253 LY6G6CO95867 125 aa3.98□□□□□ -1.77
LRRC28-220ENST00000561253 APOC3P02656 99 aa3.98□□□□□ -1.77
LRRC28-220ENST00000561253 DNAH10OSP0CZ25 163 aa3.98□□□□□ -1.77
LRRC28-220ENST00000561253 POLR2KP53803 58 aaKnown RBP3.98□□□□□ -1.77
LRRC28-220ENST00000561253 MRPL51Q4U2R6 128 aaKnown RBP3.98□□□□□ -1.77
LRRC28-220ENST00000561253 LELP1Q5T871 98 aa3.98□□□□□ -1.77
LRRC28-220ENST00000561253 MRPL54Q6P161 138 aaKnown RBP3.98□□□□□ -1.77
LRRC28-220ENST00000561253 RASL11AQ6T310 242 aa3.98□□□□□ -1.77
LRRC28-220ENST00000561253 TMEM136Q6ZRR5 245 aa3.98□□□□□ -1.77
LRRC28-220ENST00000561253 WFDC10BQ8IUB3 73 aa3.98□□□□□ -1.77
LRRC28-220ENST00000561253 SVBPQ8N300 66 aa3.98□□□□□ -1.77
LRRC28-220ENST00000561253 ATP6V0E2Q8NHE4 81 aa3.98□□□□□ -1.77
LRRC28-220ENST00000561253 RPL39LQ96EH5 51 aaKnown RBP3.98□□□□□ -1.77
LRRC28-220ENST00000561253 NIT2Q9NQR4 276 aa3.98□□□□□ -1.77
LRRC28-220ENST00000561253 TRBV24-1A0A075B6N3 115 aa3.97□□□□□ -1.77
LRRC28-220ENST00000561253 SMKR1H3BMG3 65 aa3.97□□□□□ -1.77
LRRC28-220ENST00000561253 MGPP08493 103 aa3.97□□□□□ -1.77
LRRC28-220ENST00000561253 SMIM17P0DL12 118 aa3.97□□□□□ -1.77
LRRC28-220ENST00000561253 CCL18P55774 89 aa3.97□□□□□ -1.77
LRRC28-220ENST00000561253 NDUFA5Q16718 116 aa3.97□□□□□ -1.77
LRRC28-220ENST00000561253 TYMSOSQ8TAI1 123 aa3.97□□□□□ -1.77
LRRC28-220ENST00000561253 MRAP2Q96G30 205 aa3.97□□□□□ -1.77
LRRC28-220ENST00000561253 BTF3L4Q96K17 158 aa3.97□□□□□ -1.77
LRRC28-220ENST00000561253 DNAJC30Q96LL9 226 aa3.97□□□□□ -1.77
LRRC28-220ENST00000561253 TMEM70Q9BUB7 260 aa3.97□□□□□ -1.77
LRRC28-220ENST00000561253 IGLV2-18A0A075B6J9 118 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 TRBV6-8A0A0A6YYG3 113 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 TRBV27A0A0K0K1C4 114 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 NBDYA0A0U1RRE5 68 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 H7C1H1 209 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 SNAPINO95295 136 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 NCR2O95944 276 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 RPL32P62910 135 aaKnown RBP3.96□□□□□ -1.78
LRRC28-220ENST00000561253 ELOBQ15370 118 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 IQCJQ1A5X6 159 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 LINC01556Q5JQF7 62 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 Q6ZRN7 208 aaPredicted RBP3.96□□□□□ -1.78
LRRC28-220ENST00000561253 DAZ4Q86SG3 579 aaKnown RBP3.96□□□□□ -1.78
LRRC28-220ENST00000561253 NIT1Q86X76 327 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 DAZ3Q9NR90 486 aaKnown RBP3.96□□□□□ -1.78
LRRC28-220ENST00000561253 URGCP-MRPS24S4R325 110 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 RYR1P21817 5038 aa3.96□□□□□ -1.78
LRRC28-220ENST00000561253 HSPG2P98160 4391 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 FAT1Q14517 4588 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 TGIF2-C20orf24A0A0A6YYL0 155 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 SDHAF1A6NFY7 115 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 D6R8Y8 96 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 RTL8CO15255 209 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 SIVA1O15304 175 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 NPYP01303 97 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 S100A8P05109 93 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 ESDP10768 282 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 Q1RN00 199 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 SMIM15Q7Z3B0 74 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 BORCS7Q96B45 105 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 GNB1LQ9BYB4 327 aa3.95□□□□□ -1.78
LRRC28-220ENST00000561253 KIAA1109Q2LD37 5005 aa3.94□□□□□ -1.78
LRRC28-220ENST00000561253 PHOX2AO14813 284 aa3.94□□□□□ -1.78
LRRC28-220ENST00000561253 PPBPP02775 128 aa3.94□□□□□ -1.78
LRRC28-220ENST00000561253 OR10J3Q5JRS4 329 aa3.94□□□□□ -1.78
LRRC28-220ENST00000561253 CBLN2Q8IUK8 224 aa3.94□□□□□ -1.78
LRRC28-220ENST00000561253 UBE2DNLQ8IWF7 75 aa3.94□□□□□ -1.78
LRRC28-220ENST00000561253 FAM104AQ969W3 186 aa3.94□□□□□ -1.78
LRRC28-220ENST00000561253 C20orf78Q9BR46 151 aa3.94□□□□□ -1.78
LRRC28-220ENST00000561253 CHCHD7Q9BUK0 85 aa3.94□□□□□ -1.78
LRRC28-220ENST00000561253 HERC2O95714 4834 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms