RNA–Protein interactions for RNA: ENST00000561040.1

MEIS3-209, Transcript of Meis homeobox 3, humanhuman

TSL 2

Gene MEIS3, Length 1,809 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MEIS3-209ENST00000561040 A0A1B0GWB2 263 aa11.69□□□□□ -0.54
MEIS3-209ENST00000561040 SLC25A29Q8N8R3 303 aa11.69□□□□□ -0.54
MEIS3-209ENST00000561040 SPATA3Q8NHX4 192 aa11.69□□□□□ -0.54
MEIS3-209ENST00000561040 AMELXQ99217 191 aa11.69□□□□□ -0.54
MEIS3-209ENST00000561040 Q9UF83 564 aa11.69□□□□□ -0.54
MEIS3-209ENST00000561040 UBE2D3P61077 147 aa11.68□□□□□ -0.54
MEIS3-209ENST00000561040 UBE2D2P62837 147 aa11.68□□□□□ -0.54
MEIS3-209ENST00000561040 UBE2D4Q9Y2X8 147 aa11.68□□□□□ -0.54
MEIS3-209ENST00000561040 TRGV4A0A0C4DH28 118 aa11.67□□□□□ -0.54
MEIS3-209ENST00000561040 C12orf74Q32Q52 190 aa11.67□□□□□ -0.54
MEIS3-209ENST00000561040 LINC00612Q8N6U2 182 aa11.67□□□□□ -0.54
MEIS3-209ENST00000561040 PRADC1Q9BSG0 188 aa11.67□□□□□ -0.54
MEIS3-209ENST00000561040 MYMXA0A1B0GTQ4 84 aa11.67□□□□□ -0.54
MEIS3-209ENST00000561040 A6NJY4 79 aa11.67□□□□□ -0.54
MEIS3-209ENST00000561040 WFDC2Q14508 124 aa11.67□□□□□ -0.54
MEIS3-209ENST00000561040 IGHV3-38A0A0C4DH36 116 aa11.66□□□□□ -0.54
MEIS3-209ENST00000561040 H3BMG7 143 aa11.66□□□□□ -0.54
MEIS3-209ENST00000561040 MRPS36P82909 103 aaKnown RBP11.66□□□□□ -0.54
MEIS3-209ENST00000561040 TMEM170BQ5T4T1 132 aa11.66□□□□□ -0.54
MEIS3-209ENST00000561040 OPRPNQ99935 248 aaPredicted RBP11.66□□□□□ -0.54
MEIS3-209ENST00000561040 X6R8D5 127 aa11.66□□□□□ -0.54
MEIS3-209ENST00000561040 JMJD1CQ15652 2540 aa11.66□□□□□ -0.54
MEIS3-209ENST00000561040 MAPKAPK5-AS1Q8N8E1 139 aa11.65□□□□□ -0.55
MEIS3-209ENST00000561040 TTTY13Q9BZ97 58 aa11.65□□□□□ -0.55
MEIS3-209ENST00000561040 GEMIN7Q9H840 131 aaKnown RBP11.65□□□□□ -0.55
MEIS3-209ENST00000561040 F8P00451 2351 aa11.64□□□□□ -0.55
MEIS3-209ENST00000561040 GAGE12JA6NER3 117 aa11.64□□□□□ -0.55
MEIS3-209ENST00000561040 LYRM9A8MSI8 78 aa11.64□□□□□ -0.55
MEIS3-209ENST00000561040 EMP1P54849 157 aa11.64□□□□□ -0.55
MEIS3-209ENST00000561040 GAGE4Q13068 117 aa11.64□□□□□ -0.55
MEIS3-209ENST00000561040 GAGE5Q13069 117 aa11.64□□□□□ -0.55
MEIS3-209ENST00000561040 PRO0461Q9UI25 63 aa11.64□□□□□ -0.55
MEIS3-209ENST00000561040 CSDC2Q9Y534 153 aaKnown RBP11.64□□□□□ -0.55
MEIS3-209ENST00000561040 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.63□□□□□ -0.55
MEIS3-209ENST00000561040 IGKV2-29A2NJV5 120 aaPredicted RBP11.63□□□□□ -0.55
MEIS3-209ENST00000561040 APOMO95445 188 aa11.63□□□□□ -0.55
MEIS3-209ENST00000561040 FHL2Q14192 279 aa11.63□□□□□ -0.55
MEIS3-209ENST00000561040 KRTAP24-1Q3LI83 254 aa11.63□□□□□ -0.55
MEIS3-209ENST00000561040 ETDBQ3ZM63 59 aa11.63□□□□□ -0.55
MEIS3-209ENST00000561040 DGAT2L7PQ6IED9 249 aa11.63□□□□□ -0.55
MEIS3-209ENST00000561040 HIST1H4GQ99525 98 aa11.63□□□□□ -0.55
MEIS3-209ENST00000561040 NIPBLQ6KC79 2804 aaeCLIP11.63□□□□□ -0.55
MEIS3-209ENST00000561040 H7C423 109 aa11.63□□□□□ -0.55
MEIS3-209ENST00000561040 K7ERJ3 54 aa11.63□□□□□ -0.55
MEIS3-209ENST00000561040 SHISA2Q6UWI4 295 aa11.63□□□□□ -0.55
MEIS3-209ENST00000561040 TEP1Q99973 2627 aaKnown RBP11.62□□□□□ -0.55
MEIS3-209ENST00000561040 ZNF815PA8K554 130 aa11.62□□□□□ -0.55
MEIS3-209ENST00000561040 FOXI1Q12951 378 aa11.62□□□□□ -0.55
MEIS3-209ENST00000561040 FAM104AQ969W3 186 aa11.62□□□□□ -0.55
MEIS3-209ENST00000561040 A0A0J9YXV3 536 aa11.61□□□□□ -0.55
MEIS3-209ENST00000561040 TINCRA0A1B0GVN0 87 aa11.61□□□□□ -0.55
MEIS3-209ENST00000561040 TMEM223A0PJW6 202 aa11.61□□□□□ -0.55
MEIS3-209ENST00000561040 ZNF22P17026 224 aaPredicted RBP11.61□□□□□ -0.55
MEIS3-209ENST00000561040 LEPROTO15243 131 aa11.6□□□□□ -0.55
MEIS3-209ENST00000561040 C3orf56Q8N813 242 aa11.6□□□□□ -0.55
MEIS3-209ENST00000561040 PLEKHB2Q96CS7 222 aa11.6□□□□□ -0.55
MEIS3-209ENST00000561040 TRAV26-1A0A087WT03 109 aa11.6□□□□□ -0.55
MEIS3-209ENST00000561040 TMEM262E9PQX1 116 aa11.6□□□□□ -0.55
MEIS3-209ENST00000561040 DEFB130BP0DP73 79 aa11.6□□□□□ -0.55
MEIS3-209ENST00000561040 DEFB130AP0DP74 79 aa11.6□□□□□ -0.55
MEIS3-209ENST00000561040 MIFP14174 115 aa11.6□□□□□ -0.55
MEIS3-209ENST00000561040 CEMP1Q6PRD7 247 aaPredicted RBP11.6□□□□□ -0.55
MEIS3-209ENST00000561040 SBSPONQ8IVN8 264 aa11.6□□□□□ -0.55
MEIS3-209ENST00000561040 TMEM243Q9BU79 118 aa11.6□□□□□ -0.55
MEIS3-209ENST00000561040 LGALS3P17931 250 aaKnown RBP11.59□□□□□ -0.55
MEIS3-209ENST00000561040 DEFB135Q30KP9 77 aa11.59□□□□□ -0.55
MEIS3-209ENST00000561040 NTM-AS1Q6ZSK4 140 aa11.59□□□□□ -0.55
MEIS3-209ENST00000561040 Q6ZUT4 128 aa11.59□□□□□ -0.55
MEIS3-209ENST00000561040 SH2D6Q7Z4S9 175 aa11.59□□□□□ -0.55
MEIS3-209ENST00000561040 J3QQQ9 107 aa11.58□□□□□ -0.56
MEIS3-209ENST00000561040 UBE2L6O14933 153 aa11.58□□□□□ -0.56
MEIS3-209ENST00000561040 SCGB1D4Q6XE38 83 aa11.58□□□□□ -0.56
MEIS3-209ENST00000561040 TRBV20-1A0A075B6N2 111 aa11.58□□□□□ -0.56
MEIS3-209ENST00000561040 TSPAN13O95857 204 aa11.58□□□□□ -0.56
MEIS3-209ENST00000561040 SPINK8P0C7L1 97 aa11.58□□□□□ -0.56
MEIS3-209ENST00000561040 LINC00694P0DN24 101 aa11.58□□□□□ -0.56
MEIS3-209ENST00000561040 PPDPFLQ8WWR9 84 aa11.58□□□□□ -0.56
MEIS3-209ENST00000561040 IGHV4-30-4P0DP06 118 aa11.57□□□□□ -0.56
MEIS3-209ENST00000561040 TIRAPP58753 221 aa11.57□□□□□ -0.56
MEIS3-209ENST00000561040 TMEM101Q96IK0 257 aa11.57□□□□□ -0.56
MEIS3-209ENST00000561040 NOTCH3Q9UM47 2321 aa11.57□□□□□ -0.56
MEIS3-209ENST00000561040 ATRQ13535 2644 aa11.56□□□□□ -0.56
MEIS3-209ENST00000561040 UBE2D1P51668 147 aa11.56□□□□□ -0.56
MEIS3-209ENST00000561040 FAM222AQ5U5X8 452 aa11.56□□□□□ -0.56
MEIS3-209ENST00000561040 RNF183Q96D59 192 aa11.56□□□□□ -0.56
MEIS3-209ENST00000561040 PRO0255Q9UI72 69 aa11.56□□□□□ -0.56
MEIS3-209ENST00000561040 TENM1Q9UKZ4 2725 aa11.56□□□□□ -0.56
MEIS3-209ENST00000561040 M0QXV9 152 aa11.56□□□□□ -0.56
MEIS3-209ENST00000561040 FAM19A3Q7Z5A8 133 aa11.56□□□□□ -0.56
MEIS3-209ENST00000561040 ERG28Q9UKR5 140 aa11.56□□□□□ -0.56
MEIS3-209ENST00000561040 IGHV4-28A0A0C4DH34 117 aa11.54□□□□□ -0.56
MEIS3-209ENST00000561040 LOC100131303A0A0U1RQF7 123 aa11.54□□□□□ -0.56
MEIS3-209ENST00000561040 A8MZ25 164 aa11.54□□□□□ -0.56
MEIS3-209ENST00000561040 HERVK_113P63121 156 aa11.54□□□□□ -0.56
MEIS3-209ENST00000561040 RNASE13Q5GAN3 156 aaKnown RBP11.54□□□□□ -0.56
MEIS3-209ENST00000561040 IGLV5-45A0A087WSX0 123 aa11.53□□□□□ -0.56
MEIS3-209ENST00000561040 TRBV6-8A0A0A6YYG3 113 aa11.53□□□□□ -0.56
MEIS3-209ENST00000561040 EGFEM1PQ0D2K5 195 aa11.53□□□□□ -0.56
MEIS3-209ENST00000561040 TEN1Q86WV5 123 aa11.53□□□□□ -0.56
MEIS3-209ENST00000561040 CDIP1Q9H305 208 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms