RNA–Protein interactions for RNA: ENST00000561010.5

GABPB1-211, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 867 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-211ENST00000561010 GATD1Q8NB37 220 aa4.57□□□□□ -1.68
GABPB1-211ENST00000561010 LINC00526Q96FQ7 95 aa4.57□□□□□ -1.68
GABPB1-211ENST00000561010 RNASE7Q9H1E1 156 aaKnown RBP4.57□□□□□ -1.68
GABPB1-211ENST00000561010 DPH3P1Q9H4G8 78 aa4.57□□□□□ -1.68
GABPB1-211ENST00000561010 NIT2Q9NQR4 276 aa4.57□□□□□ -1.68
GABPB1-211ENST00000561010 TRAV1-1A0A0B4J248 108 aa4.56□□□□□ -1.68
GABPB1-211ENST00000561010 IGKV2-24A0A0C4DH68 120 aa4.56□□□□□ -1.68
GABPB1-211ENST00000561010 A0A1B0GUV1 79 aa4.56□□□□□ -1.68
GABPB1-211ENST00000561010 UBE2L6O14933 153 aa4.56□□□□□ -1.68
GABPB1-211ENST00000561010 GAS8-AS1O95177 125 aa4.56□□□□□ -1.68
GABPB1-211ENST00000561010 CTRLP40313 264 aa4.56□□□□□ -1.68
GABPB1-211ENST00000561010 MEF2BQ02080 365 aaPredicted RBP4.56□□□□□ -1.68
GABPB1-211ENST00000561010 COX6A2Q02221 97 aa4.56□□□□□ -1.68
GABPB1-211ENST00000561010 COTL1Q14019 142 aa4.56□□□□□ -1.68
GABPB1-211ENST00000561010 TWIST1Q15672 202 aa4.56□□□□□ -1.68
GABPB1-211ENST00000561010 LYPD6BQ8NI32 183 aa4.56□□□□□ -1.68
GABPB1-211ENST00000561010 SPACA4Q8TDM5 124 aa4.56□□□□□ -1.68
GABPB1-211ENST00000561010 TRAV8-4A0A0B4J246 113 aa4.55□□□□□ -1.68
GABPB1-211ENST00000561010 F2Z2F3 143 aa4.55□□□□□ -1.68
GABPB1-211ENST00000561010 TRGC1P0CF51 173 aa4.55□□□□□ -1.68
GABPB1-211ENST00000561010 BCL2P10415 239 aa4.55□□□□□ -1.68
GABPB1-211ENST00000561010 MAJINQ3KP22 176 aa4.55□□□□□ -1.68
GABPB1-211ENST00000561010 RNASEKQ6P5S7 137 aaKnown RBP4.55□□□□□ -1.68
GABPB1-211ENST00000561010 SVBPQ8N300 66 aa4.55□□□□□ -1.68
GABPB1-211ENST00000561010 OCC1Q8TAD7 63 aa4.55□□□□□ -1.68
GABPB1-211ENST00000561010 PGLYRP4Q96LB8 373 aa4.55□□□□□ -1.68
GABPB1-211ENST00000561010 A0A096LNI7 61 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 TMEM218A2RU14 115 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 XKRY2A2RUG3 117 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 SNAPINO95295 136 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 APOC3P02656 99 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 PEA15Q15121 130 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 C10orf25Q5T742 122 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 AMMECR1LQ6DCA0 310 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 WDR73Q6P4I2 378 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 Q6ZRU5 148 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 GTSF1Q8WW33 167 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 CHCHD10Q8WYQ3 142 aaPredicted RBP4.54□□□□□ -1.68
GABPB1-211ENST00000561010 SEC11CQ9BY50 192 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 SMDT1Q9H4I9 107 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 RPP21Q9H633 154 aaKnown RBP4.54□□□□□ -1.68
GABPB1-211ENST00000561010 PLAC8Q9NZF1 115 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
GABPB1-211ENST00000561010 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.53□□□□□ -1.68
GABPB1-211ENST00000561010 FAM231BA6NCW3 169 aa4.53□□□□□ -1.68
GABPB1-211ENST00000561010 PDE6DO43924 150 aa4.53□□□□□ -1.68
GABPB1-211ENST00000561010 RPS10P46783 165 aaKnown RBP4.53□□□□□ -1.68
GABPB1-211ENST00000561010 XCL1P47992 114 aa4.53□□□□□ -1.68
GABPB1-211ENST00000561010 TNXBP22105 4242 aa4.53□□□□□ -1.68
GABPB1-211ENST00000561010 UBR4Q5T4S7 5183 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 SDHAF1A6NFY7 115 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 F8W036 122 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 APCSP02743 223 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 FGF6P10767 208 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 CEBPGP53567 150 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 PRR3P79522 188 aaKnown RBP4.52□□□□□ -1.69
GABPB1-211ENST00000561010 C10orf91Q5T1B1 145 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 STPG4Q8N801 248 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 SMIM12Q96EX1 92 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 RNF185Q96GF1 192 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 CNFNQ9BYD5 112 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 TMEM242Q9NWH2 141 aa4.52□□□□□ -1.69
GABPB1-211ENST00000561010 CARHSP1Q9Y2V2 147 aaKnown RBP4.52□□□□□ -1.69
GABPB1-211ENST00000561010 GVQW2A0A096LPI5 108 aaPredicted RBP4.51□□□□□ -1.69
GABPB1-211ENST00000561010 CCL25O15444 150 aa4.51□□□□□ -1.69
GABPB1-211ENST00000561010 GATCO43716 136 aaKnown RBP4.51□□□□□ -1.69
GABPB1-211ENST00000561010 NDUFS6O75380 124 aaKnown RBP4.51□□□□□ -1.69
GABPB1-211ENST00000561010 SCO1O75880 301 aa4.51□□□□□ -1.69
GABPB1-211ENST00000561010 TSHBP01222 138 aa4.51□□□□□ -1.69
GABPB1-211ENST00000561010 PMCHP20382 165 aa4.51□□□□□ -1.69
GABPB1-211ENST00000561010 RNASE13Q5GAN3 156 aaKnown RBP4.51□□□□□ -1.69
GABPB1-211ENST00000561010 C7orf33Q8WU49 177 aa4.51□□□□□ -1.69
GABPB1-211ENST00000561010 LINC00959A0A1B0GUT2 108 aa4.5□□□□□ -1.69
GABPB1-211ENST00000561010 LOC105371267A0A1B0GV96 52 aa4.5□□□□□ -1.69
GABPB1-211ENST00000561010 SMKR1H3BMG3 65 aa4.5□□□□□ -1.69
GABPB1-211ENST00000561010 NCR2O95944 276 aa4.5□□□□□ -1.69
GABPB1-211ENST00000561010 CFAP161Q6P656 301 aa4.5□□□□□ -1.69
GABPB1-211ENST00000561010 OR5A1Q8NGJ0 315 aa4.5□□□□□ -1.69
GABPB1-211ENST00000561010 MPLKIPQ8TAP9 179 aa4.5□□□□□ -1.69
GABPB1-211ENST00000561010 BIN3Q9NQY0 253 aa4.5□□□□□ -1.69
GABPB1-211ENST00000561010 I3L3M4 83 aa4.49□□□□□ -1.69
GABPB1-211ENST00000561010 SMIM15Q7Z3B0 74 aa4.49□□□□□ -1.69
GABPB1-211ENST00000561010 CARD19Q96LW7 228 aa4.49□□□□□ -1.69
GABPB1-211ENST00000561010 EIF5A2Q9GZV4 153 aaKnown RBP4.49□□□□□ -1.69
GABPB1-211ENST00000561010 ESDP10768 282 aa4.48□□□□□ -1.69
GABPB1-211ENST00000561010 AMN1Q8IY45 258 aa4.48□□□□□ -1.69
GABPB1-211ENST00000561010 LINC01600Q96MT4 127 aa4.48□□□□□ -1.69
GABPB1-211ENST00000561010 CTDSP1Q9GZU7 261 aa4.48□□□□□ -1.69
GABPB1-211ENST00000561010 ST20Q9HBF5 79 aa4.48□□□□□ -1.69
GABPB1-211ENST00000561010 SMCO4Q9NRQ5 59 aa4.48□□□□□ -1.69
GABPB1-211ENST00000561010 LRP2P98164 4655 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 IGLV4-69A0A075B6H9 119 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 IGHV1-58A0A0C4DH39 117 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 A0A0J9YXV3 536 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 TRBV6-5A0A0K0K1A5 114 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 A0A1W2PNN7 141 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 HIGD1CA8MV81 97 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 A8MWL6 223 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 H7C423 109 aa4.47□□□□□ -1.69
GABPB1-211ENST00000561010 ZNF25P17030 456 aaPredicted RBP4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms