RNA–Protein interactions for RNA: ENST00000560858.1

SPG11-223, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 5

Gene SPG11, Length 447 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-223ENST00000560858 A0A0J9YXY3 114 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 TRBV10-2A0A0K0K1G8 114 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 FAM240AA0A1B0GVK7 77 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 TINCRA0A1B0GVN0 87 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 A8MU10 97 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 KRTAP16-1A8MUX0 517 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 TMEM262E9PQX1 116 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 I3L3M4 83 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 SLC25A20O43772 301 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 MSMBP08118 114 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 SPINK8P0C7L1 97 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 RBMY1A1P0DJD3 496 aaKnown RBP1.76□□□□□ -2.13
SPG11-223ENST00000560858 RBMY1CP0DJD4 496 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 IGHV3-30-3P0DP02 117 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 SRD5A1P18405 259 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 PSMB2P49721 201 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 EMP1P54849 157 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 CKS1BP61024 79 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 SNRPD3P62318 126 aaKnown RBP1.76□□□□□ -2.13
SPG11-223ENST00000560858 RBMY1FQ15415 496 aaKnown RBP1.76□□□□□ -2.13
SPG11-223ENST00000560858 MRPL23Q16540 153 aaKnown RBP1.76□□□□□ -2.13
SPG11-223ENST00000560858 LY6EQ16553 131 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 MIAQ16674 131 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 SPINK13Q1W4C9 94 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 TMEM95Q3KNT9 176 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 LINC01620Q4KN68 170 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 FAM74A4Q5TZK3 123 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 ZFAND6Q6FIF0 208 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 FAM19A3Q7Z5A8 133 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 ARL17AQ8IVW1 177 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 CCL19Q99731 98 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 CHCHD7Q9BUK0 85 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 TIMM21Q9BVV7 248 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 PRORYQ9H606 182 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 ERG28Q9UKR5 140 aa1.76□□□□□ -2.13
SPG11-223ENST00000560858 DCHS1Q96JQ0 3298 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 NBASA2RRP1 2371 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 IGKV3-7A0A075B6H7 116 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 TRAV12-2A0A075B6T6 113 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 RBMY1BA6NDE4 496 aaKnown RBP1.75□□□□□ -2.13
SPG11-223ENST00000560858 RBMY1EA6NEQ0 496 aaKnown RBP1.75□□□□□ -2.13
SPG11-223ENST00000560858 B4DSR2 109 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 C9JAW5 83 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 H3BMM0 161 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 J3QLI3 93 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 LST1O00453 97 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 NDUFA1O15239 70 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 IGHV3-53P01767 116 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 RBMY1DP0C7P1 496 aaKnown RBP1.75□□□□□ -2.13
SPG11-223ENST00000560858 DNAH10OSP0CZ25 163 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 CD28P10747 220 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 IFITM1P13164 125 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 BLCAPP62952 87 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 ZNF415Q09FC8 603 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 ATXN8Q156A1 80 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 DEFB121Q5J5C9 76 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 C10orf99Q6UWK7 81 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 MUSTN1Q8IVN3 82 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 TMEM61Q8N0U2 210 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 Q8N2B8 174 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 C11orf72Q8NBR9 251 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 UBE2WQ96B02 151 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 VSIG2Q96IQ7 327 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 DNAJC30Q96LL9 226 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 OPRPNQ99935 248 aaPredicted RBP1.75□□□□□ -2.13
SPG11-223ENST00000560858 GEMIN7Q9H840 131 aaKnown RBP1.75□□□□□ -2.13
SPG11-223ENST00000560858 ZNF702PQ9H963 129 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 VPREB3Q9UKI3 123 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 UBE2D4Q9Y2X8 147 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 ICOSQ9Y6W8 199 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 IGF2RP11717 2491 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 ATRXP46100 2492 aa1.75□□□□□ -2.13
SPG11-223ENST00000560858 SPTAN1Q13813 2472 aaKnown RBP1.74□□□□□ -2.13
SPG11-223ENST00000560858 IGHV3-64A0A075B6Q5 118 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 TRAV26-1A0A087WT03 109 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 TRAV8-3A0A0A6YYJ7 113 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 A0A0J9YWU9 116 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 RS1O15537 224 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 TGFAP01135 160 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 IGHV4-59P01825 116 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 SCGB1C2P0DMR2 95 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 ATP5J2P56134 94 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 SYNJ2BPP57105 145 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 LY6DQ14210 128 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 DEFB112Q30KQ8 113 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 ADAMTSL4-AS1Q5T5F5 129 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 SFTA2Q6UW10 78 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 SVIPQ8NHG7 77 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 UBE2E2Q96LR5 201 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 SPXQ9BT56 116 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 YAE1D1Q9NRH1 226 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 NDUFA12Q9UI09 145 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 CSDC2Q9Y534 153 aaKnown RBP1.74□□□□□ -2.13
SPG11-223ENST00000560858 LRBAP50851 2863 aa1.74□□□□□ -2.13
SPG11-223ENST00000560858 IGHV3OR16-12A0A075B7B8 117 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 TRAV8-4A0A0B4J246 113 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 TRAV4A0A0B4J268 109 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 TRBV10-1A0A0K0K1A3 114 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 TRBV7-7A0A0K0K1E9 115 aa1.73□□□□□ -2.13
SPG11-223ENST00000560858 TEX49A0A1B0GTD5 131 aa1.73□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 142.5 ms