RNA–Protein interactions for RNA: ENST00000560463.5

TRAF3-209, Transcript of TNF receptor associated factor 3, humanhuman

TSL 3

Gene TRAF3, Length 701 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-209ENST00000560463 C12orf57Q99622 126 aa5.96□□□□□ -1.46
TRAF3-209ENST00000560463 CHCHD5Q9BSY4 110 aa5.96□□□□□ -1.46
TRAF3-209ENST00000560463 VCX2Q9H322 139 aa5.96□□□□□ -1.46
TRAF3-209ENST00000560463 CSMD3Q7Z407 3707 aa5.96□□□□□ -1.46
TRAF3-209ENST00000560463 F8VRH5 84 aa5.95□□□□□ -1.46
TRAF3-209ENST00000560463 LYPD5Q6UWN5 251 aa5.95□□□□□ -1.46
TRAF3-209ENST00000560463 TEX43Q6ZNM6 134 aa5.95□□□□□ -1.46
TRAF3-209ENST00000560463 OR5A1Q8NGJ0 315 aa5.95□□□□□ -1.46
TRAF3-209ENST00000560463 AMELXQ99217 191 aa5.95□□□□□ -1.46
TRAF3-209ENST00000560463 C2orf88Q9BSF0 95 aa5.95□□□□□ -1.46
TRAF3-209ENST00000560463 CST9LQ9H4G1 147 aa5.95□□□□□ -1.46
TRAF3-209ENST00000560463 CDC42SE2Q9NRR3 84 aa5.95□□□□□ -1.46
TRAF3-209ENST00000560463 CHTOPQ9Y3Y2 248 aaKnown RBP5.95□□□□□ -1.46
TRAF3-209ENST00000560463 TRAV8-6A0A0B4J262 113 aa5.94□□□□□ -1.46
TRAF3-209ENST00000560463 PRSS29PA6NIE9 313 aa5.94□□□□□ -1.46
TRAF3-209ENST00000560463 DPM2O94777 84 aa5.94□□□□□ -1.46
TRAF3-209ENST00000560463 IGKCP01834 107 aa5.94□□□□□ -1.46
TRAF3-209ENST00000560463 PLNP26678 52 aa5.94□□□□□ -1.46
TRAF3-209ENST00000560463 CEMP1Q6PRD7 247 aaPredicted RBP5.94□□□□□ -1.46
TRAF3-209ENST00000560463 ZNF664Q8N3J9 261 aa5.94□□□□□ -1.46
TRAF3-209ENST00000560463 GAGE6Q13070 117 aa5.93□□□□□ -1.46
TRAF3-209ENST00000560463 FAM104AQ969W3 186 aa5.93□□□□□ -1.46
TRAF3-209ENST00000560463 OPRPNQ99935 248 aaPredicted RBP5.93□□□□□ -1.46
TRAF3-209ENST00000560463 VAMP8Q9BV40 100 aa5.93□□□□□ -1.46
TRAF3-209ENST00000560463 MRPL35Q9NZE8 188 aaKnown RBP5.93□□□□□ -1.46
TRAF3-209ENST00000560463 TGP01266 2768 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 TRAV9-2A0A087WT02 112 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 NUPR2A6NF83 97 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 IGLL5B9A064 214 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 HSBP1L1C9JCN9 74 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 TMEM262E9PQX1 116 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 CCL25O15444 150 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 TCTAP57738 103 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 SEC11AP67812 179 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 ESRGQ1W209 222 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 Q6ZUT4 128 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 FAM19A3Q7Z5A8 133 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 NFE4Q86UQ8 179 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 PMCHL2Q9BQD1 86 aa5.92□□□□□ -1.46
TRAF3-209ENST00000560463 TINCRA0A1B0GVN0 87 aa5.91□□□□□ -1.46
TRAF3-209ENST00000560463 IGLC3P0DOY3 106 aa5.91□□□□□ -1.46
TRAF3-209ENST00000560463 CCL18P55774 89 aa5.91□□□□□ -1.46
TRAF3-209ENST00000560463 RBX1P62877 108 aa5.91□□□□□ -1.46
TRAF3-209ENST00000560463 MPV17L2Q567V2 206 aa5.91□□□□□ -1.46
TRAF3-209ENST00000560463 ZC2HC1BQ5TFG8 222 aa5.91□□□□□ -1.46
TRAF3-209ENST00000560463 CDPF1Q6NVV7 123 aa5.91□□□□□ -1.46
TRAF3-209ENST00000560463 ATOH7Q8N100 152 aa5.91□□□□□ -1.46
TRAF3-209ENST00000560463 KLK5Q9Y337 293 aaPredicted RBP5.91□□□□□ -1.46
TRAF3-209ENST00000560463 TENM2Q9NT68 2774 aa5.9□□□□□ -1.46
TRAF3-209ENST00000560463 IGLV4-69A0A075B6H9 119 aa5.9□□□□□ -1.46
TRAF3-209ENST00000560463 IGLV4-60A0A075B6I1 120 aa5.9□□□□□ -1.46
TRAF3-209ENST00000560463 UBE2D1P51668 147 aa5.9□□□□□ -1.46
TRAF3-209ENST00000560463 FBN3Q75N90 2809 aa5.9□□□□□ -1.47
TRAF3-209ENST00000560463 C11orf86A6NJI1 115 aa5.89□□□□□ -1.47
TRAF3-209ENST00000560463 HERVK_113P63121 156 aa5.89□□□□□ -1.47
TRAF3-209ENST00000560463 SPATA45Q537H7 98 aa5.89□□□□□ -1.47
TRAF3-209ENST00000560463 RNASE13Q5GAN3 156 aaKnown RBP5.89□□□□□ -1.47
TRAF3-209ENST00000560463 CHAC1Q9BUX1 264 aa5.89□□□□□ -1.47
TRAF3-209ENST00000560463 APLNQ9ULZ1 77 aa5.89□□□□□ -1.47
TRAF3-209ENST00000560463 MRPS16Q9Y3D3 137 aaKnown RBP5.89□□□□□ -1.47
TRAF3-209ENST00000560463 PAM16Q9Y3D7 125 aa5.89□□□□□ -1.47
TRAF3-209ENST00000560463 A0A0J9YXV3 536 aa5.88□□□□□ -1.47
TRAF3-209ENST00000560463 hDV102S1A0JD36 115 aa5.88□□□□□ -1.47
TRAF3-209ENST00000560463 TSTD3H0UI37 97 aa5.88□□□□□ -1.47
TRAF3-209ENST00000560463 ANGP03950 147 aaKnown RBP5.88□□□□□ -1.47
TRAF3-209ENST00000560463 HERVK_113P61574 105 aa5.88□□□□□ -1.47
TRAF3-209ENST00000560463 LINC01556Q5JQF7 62 aa5.88□□□□□ -1.47
TRAF3-209ENST00000560463 WFDC10BQ8IUB3 73 aa5.88□□□□□ -1.47
TRAF3-209ENST00000560463 UPK3BQ9BT76 320 aa5.88□□□□□ -1.47
TRAF3-209ENST00000560463 GEMIN7Q9H840 131 aaKnown RBP5.88□□□□□ -1.47
TRAF3-209ENST00000560463 IGLV5-45A0A087WSX0 123 aa5.87□□□□□ -1.47
TRAF3-209ENST00000560463 LINC00959A0A1B0GUT2 108 aa5.87□□□□□ -1.47
TRAF3-209ENST00000560463 H3BRM9 83 aa5.87□□□□□ -1.47
TRAF3-209ENST00000560463 SIVA1O15304 175 aa5.87□□□□□ -1.47
TRAF3-209ENST00000560463 REG3AQ06141 175 aa5.87□□□□□ -1.47
TRAF3-209ENST00000560463 SS18Q15532 418 aa5.87□□□□□ -1.47
TRAF3-209ENST00000560463 MAJINQ3KP22 176 aa5.87□□□□□ -1.47
TRAF3-209ENST00000560463 TMEM170BQ5T4T1 132 aa5.87□□□□□ -1.47
TRAF3-209ENST00000560463 LINC00242Q5T6M2 205 aa5.87□□□□□ -1.47
TRAF3-209ENST00000560463 LYSTQ99698 3801 aa5.87□□□□□ -1.47
TRAF3-209ENST00000560463 LINC00588Q9Y4M8 146 aa5.87□□□□□ -1.47
TRAF3-209ENST00000560463 PLECQ15149 4684 aaKnown RBP5.87□□□□□ -1.47
TRAF3-209ENST00000560463 TRAV13-1A0A0B4J241 112 aa5.86□□□□□ -1.47
TRAF3-209ENST00000560463 TRAV8-4A0A0B4J246 113 aa5.86□□□□□ -1.47
TRAF3-209ENST00000560463 E9PLD3 99 aa5.86□□□□□ -1.47
TRAF3-209ENST00000560463 K7EP13 123 aa5.86□□□□□ -1.47
TRAF3-209ENST00000560463 DNAH10OSP0CZ25 163 aa5.86□□□□□ -1.47
TRAF3-209ENST00000560463 ZNF22P17026 224 aaPredicted RBP5.86□□□□□ -1.47
TRAF3-209ENST00000560463 LINC00269Q8N2A0 174 aa5.86□□□□□ -1.47
TRAF3-209ENST00000560463 STPG4Q8N801 248 aa5.86□□□□□ -1.47
TRAF3-209ENST00000560463 PRR34Q9NV39 138 aa5.86□□□□□ -1.47
TRAF3-209ENST00000560463 IGKV3OR2-268A0A0C4DH90 116 aa5.85□□□□□ -1.47
TRAF3-209ENST00000560463 TMEM223A0PJW6 202 aa5.85□□□□□ -1.47
TRAF3-209ENST00000560463 CRPP02741 224 aa5.85□□□□□ -1.47
TRAF3-209ENST00000560463 MIAQ16674 131 aa5.85□□□□□ -1.47
TRAF3-209ENST00000560463 ANKRD39Q53RE8 183 aa5.85□□□□□ -1.47
TRAF3-209ENST00000560463 LINC00469Q8N7U9 141 aa5.85□□□□□ -1.47
TRAF3-209ENST00000560463 WWC2-AS2Q96NR7 200 aa5.85□□□□□ -1.47
TRAF3-209ENST00000560463 CDKN2A-AS1Q9UH64 79 aa5.85□□□□□ -1.47
TRAF3-209ENST00000560463 KLK12Q9UKR0 248 aa5.85□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms