RNA–Protein interactions for RNA: ENST00000560013.5

TM2D3-209, Transcript of TM2 domain containing 3, humanhuman

TSL 2

Gene TM2D3, Length 1,868 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM2D3-209ENST00000560013 TCTAP57738 103 aa16.46■□□□□ 0.22
TM2D3-209ENST00000560013 ATP6V0E2Q8NHE4 81 aa16.46■□□□□ 0.22
TM2D3-209ENST00000560013 VSIG2Q96IQ7 327 aa16.46■□□□□ 0.22
TM2D3-209ENST00000560013 TMEM243Q9BU79 118 aa16.46■□□□□ 0.22
TM2D3-209ENST00000560013 NOTCH1P46531 2555 aa16.45■□□□□ 0.22
TM2D3-209ENST00000560013 F5H768 121 aa16.45■□□□□ 0.22
TM2D3-209ENST00000560013 DLEU1O43261 78 aa16.45■□□□□ 0.22
TM2D3-209ENST00000560013 TMEM97Q5BJF2 176 aa16.45■□□□□ 0.22
TM2D3-209ENST00000560013 DEFB121Q5J5C9 76 aa16.45■□□□□ 0.22
TM2D3-209ENST00000560013 ZNF25P17030 456 aaPredicted RBP16.44■□□□□ 0.22
TM2D3-209ENST00000560013 C12orf74Q32Q52 190 aa16.44■□□□□ 0.22
TM2D3-209ENST00000560013 MPV17L2Q567V2 206 aa16.44■□□□□ 0.22
TM2D3-209ENST00000560013 DGAT2L7PQ6IED9 249 aa16.44■□□□□ 0.22
TM2D3-209ENST00000560013 TRBV6-8A0A0A6YYG3 113 aa16.44■□□□□ 0.22
TM2D3-209ENST00000560013 A0A0J9YY99 117 aa16.44■□□□□ 0.22
TM2D3-209ENST00000560013 C11orf86A6NJI1 115 aa16.43■□□□□ 0.22
TM2D3-209ENST00000560013 HTN3P15516 51 aa16.43■□□□□ 0.22
TM2D3-209ENST00000560013 NMUP48645 174 aa16.43■□□□□ 0.22
TM2D3-209ENST00000560013 MRPS36P82909 103 aaKnown RBP16.43■□□□□ 0.22
TM2D3-209ENST00000560013 SMAGPQ0VAQ4 97 aa16.43■□□□□ 0.22
TM2D3-209ENST00000560013 CSDC2Q9Y534 153 aaKnown RBP16.43■□□□□ 0.22
TM2D3-209ENST00000560013 H7C423 109 aa16.42■□□□□ 0.22
TM2D3-209ENST00000560013 UBE2L6O14933 153 aa16.42■□□□□ 0.22
TM2D3-209ENST00000560013 TRAV26-1A0A087WT03 109 aa16.42■□□□□ 0.22
TM2D3-209ENST00000560013 Q6ZUT4 128 aa16.42■□□□□ 0.22
TM2D3-209ENST00000560013 RNASE13Q5GAN3 156 aaKnown RBP16.41■□□□□ 0.22
TM2D3-209ENST00000560013 BVES-AS1Q5T3Y7 98 aa16.41■□□□□ 0.22
TM2D3-209ENST00000560013 PCP2Q8IVA1 136 aa16.41■□□□□ 0.22
TM2D3-209ENST00000560013 SPATA25Q9BR10 227 aa16.41■□□□□ 0.22
TM2D3-209ENST00000560013 IGKV2D-26A0A0A0MRZ7 120 aa16.4■□□□□ 0.22
TM2D3-209ENST00000560013 NFE4Q86UQ8 179 aa16.4■□□□□ 0.22
TM2D3-209ENST00000560013 A0A0J9YWU9 116 aa16.39■□□□□ 0.22
TM2D3-209ENST00000560013 SIVA1O15304 175 aa16.39■□□□□ 0.22
TM2D3-209ENST00000560013 TM2D3Q9BRN9 247 aa16.39■□□□□ 0.22
TM2D3-209ENST00000560013 AMMECR1LQ6DCA0 310 aa16.38■□□□□ 0.21
TM2D3-209ENST00000560013 MRAPQ8TCY5 172 aa16.38■□□□□ 0.21
TM2D3-209ENST00000560013 NBEAL1Q6ZS30 2694 aa16.38■□□□□ 0.21
TM2D3-209ENST00000560013 A0A0J9YXV3 536 aa16.37■□□□□ 0.21
TM2D3-209ENST00000560013 CHAC1Q9BUX1 264 aa16.37■□□□□ 0.21
TM2D3-209ENST00000560013 A0A096LPF7 62 aa16.37■□□□□ 0.21
TM2D3-209ENST00000560013 TMEM170BQ5T4T1 132 aa16.37■□□□□ 0.21
TM2D3-209ENST00000560013 OR5A1Q8NGJ0 315 aa16.36■□□□□ 0.21
TM2D3-209ENST00000560013 CHCHD5Q9BSY4 110 aa16.36■□□□□ 0.21
TM2D3-209ENST00000560013 MRPL23Q16540 153 aaKnown RBP16.35■□□□□ 0.21
TM2D3-209ENST00000560013 TMEM101Q96IK0 257 aa16.35■□□□□ 0.21
TM2D3-209ENST00000560013 CDC42SE2Q9NRR3 84 aa16.35■□□□□ 0.21
TM2D3-209ENST00000560013 MGAM2Q2M2H8 2515 aa16.35■□□□□ 0.21
TM2D3-209ENST00000560013 GAGE6Q13070 117 aa16.35■□□□□ 0.21
TM2D3-209ENST00000560013 E9PLD3 99 aa16.34■□□□□ 0.21
TM2D3-209ENST00000560013 Q6ZTC4 211 aa16.34■□□□□ 0.21
TM2D3-209ENST00000560013 HERVK_113P61574 105 aa16.33■□□□□ 0.2
TM2D3-209ENST00000560013 ICOSQ9Y6W8 199 aa16.33■□□□□ 0.2
TM2D3-209ENST00000560013 TINCRA0A1B0GVN0 87 aa16.32■□□□□ 0.2
TM2D3-209ENST00000560013 UBE2D1P51668 147 aa16.32■□□□□ 0.2
TM2D3-209ENST00000560013 SH2D6Q7Z4S9 175 aa16.32■□□□□ 0.2
TM2D3-209ENST00000560013 C11orf45Q8TAV5 145 aa16.32■□□□□ 0.2
TM2D3-209ENST00000560013 TRAV8-6A0A0B4J262 113 aa16.31■□□□□ 0.2
TM2D3-209ENST00000560013 ZNF22P17026 224 aaPredicted RBP16.31■□□□□ 0.2
TM2D3-209ENST00000560013 HSD52Q0P140 79 aa16.31■□□□□ 0.2
TM2D3-209ENST00000560013 TTTY13Q9BZ97 58 aa16.31■□□□□ 0.2
TM2D3-209ENST00000560013 HIGD1BQ9P298 99 aa16.31■□□□□ 0.2
TM2D3-209ENST00000560013 ORAOV1Q8WV07 137 aa16.3■□□□□ 0.2
TM2D3-209ENST00000560013 NANOS2P60321 138 aaKnown RBP16.29■□□□□ 0.2
TM2D3-209ENST00000560013 COX11Q9Y6N1 276 aa16.29■□□□□ 0.2
TM2D3-209ENST00000560013 TMEM223A0PJW6 202 aa16.29■□□□□ 0.2
TM2D3-209ENST00000560013 H3BNG1 76 aa16.29■□□□□ 0.2
TM2D3-209ENST00000560013 TENM3Q9P273 2699 aa16.28■□□□□ 0.2
TM2D3-209ENST00000560013 SEC11AP67812 179 aa16.28■□□□□ 0.2
TM2D3-209ENST00000560013 IGLV4-60A0A075B6I1 120 aa16.27■□□□□ 0.2
TM2D3-209ENST00000560013 MAPKAPK5-AS1Q8N8E1 139 aa16.27■□□□□ 0.2
TM2D3-209ENST00000560013 GEMIN7Q9H840 131 aaKnown RBP16.27■□□□□ 0.2
TM2D3-209ENST00000560013 TIRAPP58753 221 aa16.27■□□□□ 0.19
TM2D3-209ENST00000560013 FAM19A3Q7Z5A8 133 aa16.27■□□□□ 0.19
TM2D3-209ENST00000560013 TMEM262E9PQX1 116 aa16.26■□□□□ 0.19
TM2D3-209ENST00000560013 Q6ZVH6 145 aa16.26■□□□□ 0.19
TM2D3-209ENST00000560013 A0A1B0GUV1 79 aa16.25■□□□□ 0.19
TM2D3-209ENST00000560013 TAX1BP3O14907 124 aa16.25■□□□□ 0.19
TM2D3-209ENST00000560013 TRAV13-1A0A0B4J241 112 aa16.25■□□□□ 0.19
TM2D3-209ENST00000560013 LINC00242Q5T6M2 205 aa16.25■□□□□ 0.19
TM2D3-209ENST00000560013 DEFB131BA0A096LNP1 70 aa16.24■□□□□ 0.19
TM2D3-209ENST00000560013 HERVK_113P63121 156 aa16.23■□□□□ 0.19
TM2D3-209ENST00000560013 MYMXA0A1B0GTQ4 84 aa16.22■□□□□ 0.19
TM2D3-209ENST00000560013 IGLV5-45A0A087WSX0 123 aa16.22■□□□□ 0.19
TM2D3-209ENST00000560013 RBX1P62877 108 aa16.22■□□□□ 0.19
TM2D3-209ENST00000560013 COX6A2Q02221 97 aa16.22■□□□□ 0.19
TM2D3-209ENST00000560013 LELP1Q5T871 98 aa16.22■□□□□ 0.19
TM2D3-209ENST00000560013 LEPROTO15243 131 aa16.21■□□□□ 0.19
TM2D3-209ENST00000560013 CDKN2A-AS1Q9UH64 79 aa16.2■□□□□ 0.18
TM2D3-209ENST00000560013 J3QQQ9 107 aa16.2■□□□□ 0.18
TM2D3-209ENST00000560013 LYPD5Q6UWN5 251 aa16.2■□□□□ 0.18
TM2D3-209ENST00000560013 IGHV3-64A0A075B6Q5 118 aa16.19■□□□□ 0.18
TM2D3-209ENST00000560013 A6NDN8 102 aa16.19■□□□□ 0.18
TM2D3-209ENST00000560013 ZNF815PA8K554 130 aa16.19■□□□□ 0.18
TM2D3-209ENST00000560013 TSPEAR-AS2P59090 65 aa16.19■□□□□ 0.18
TM2D3-209ENST00000560013 H3BRM9 83 aa16.18■□□□□ 0.18
TM2D3-209ENST00000560013 PLEKHB2Q96CS7 222 aa16.18■□□□□ 0.18
TM2D3-209ENST00000560013 B9D2Q9BPU9 175 aa16.18■□□□□ 0.18
TM2D3-209ENST00000560013 HUWE1Q7Z6Z7 4374 aaKnown RBP16.18■□□□□ 0.18
TM2D3-209ENST00000560013 IGHV1-58A0A0C4DH39 117 aa16.17■□□□□ 0.18
TM2D3-209ENST00000560013 IGKV3OR2-268A0A0C4DH90 116 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms