RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 CYSLTR1Q9Y271 337 aa9.72□□□□□ -0.85
SMAD6-204ENST00000559931 IGLV4-60A0A075B6I1 120 aa9.71□□□□□ -0.86
SMAD6-204ENST00000559931 ZNF25P17030 456 aaPredicted RBP9.71□□□□□ -0.86
SMAD6-204ENST00000559931 C2orf66Q6UXQ4 117 aa9.71□□□□□ -0.86
SMAD6-204ENST00000559931 LINC01546A6NGU7 62 aa9.7□□□□□ -0.86
SMAD6-204ENST00000559931 CRPP02741 224 aa9.7□□□□□ -0.86
SMAD6-204ENST00000559931 MRPL52Q86TS9 123 aaKnown RBP9.7□□□□□ -0.86
SMAD6-204ENST00000559931 LINC00269Q8N2A0 174 aa9.7□□□□□ -0.86
SMAD6-204ENST00000559931 UBE2WQ96B02 151 aa9.7□□□□□ -0.86
SMAD6-204ENST00000559931 CHCHD1Q96BP2 118 aaKnown RBP9.7□□□□□ -0.86
SMAD6-204ENST00000559931 Q9HAA7 133 aa9.7□□□□□ -0.86
SMAD6-204ENST00000559931 IGKV3OR2-268A0A0C4DH90 116 aa9.69□□□□□ -0.86
SMAD6-204ENST00000559931 IBA57-AS1B1ANH7 110 aa9.69□□□□□ -0.86
SMAD6-204ENST00000559931 PMCHL1Q16048 86 aa9.69□□□□□ -0.86
SMAD6-204ENST00000559931 CLPSL2Q6UWE3 100 aa9.69□□□□□ -0.86
SMAD6-204ENST00000559931 OR10D4PQ8NGN7 298 aa9.69□□□□□ -0.86
SMAD6-204ENST00000559931 URB1-AS1Q96HZ7 61 aa9.69□□□□□ -0.86
SMAD6-204ENST00000559931 TIMM21Q9BVV7 248 aa9.69□□□□□ -0.86
SMAD6-204ENST00000559931 KRTAP1-5Q9BYS1 174 aa9.69□□□□□ -0.86
SMAD6-204ENST00000559931 SPANXA1Q9NS26 97 aa9.69□□□□□ -0.86
SMAD6-204ENST00000559931 UBE2D4Q9Y2X8 147 aa9.69□□□□□ -0.86
SMAD6-204ENST00000559931 HSBP1O75506 76 aa9.68□□□□□ -0.86
SMAD6-204ENST00000559931 FABP4P15090 132 aa9.68□□□□□ -0.86
SMAD6-204ENST00000559931 Q6ZR54 194 aa9.68□□□□□ -0.86
SMAD6-204ENST00000559931 ZNF664Q8N3J9 261 aa9.68□□□□□ -0.86
SMAD6-204ENST00000559931 PACRGQ96M98 296 aaPredicted RBP9.68□□□□□ -0.86
SMAD6-204ENST00000559931 SCGB3A1Q96QR1 104 aa9.68□□□□□ -0.86
SMAD6-204ENST00000559931 TRAV8-3A0A0A6YYJ7 113 aa9.67□□□□□ -0.86
SMAD6-204ENST00000559931 PCP4L1A6NKN8 68 aa9.67□□□□□ -0.86
SMAD6-204ENST00000559931 IFITM10A6NMD0 228 aa9.67□□□□□ -0.86
SMAD6-204ENST00000559931 SERF1AO75920 110 aa9.67□□□□□ -0.86
SMAD6-204ENST00000559931 REG3AQ06141 175 aa9.67□□□□□ -0.86
SMAD6-204ENST00000559931 C1orf134Q5TEV5 83 aa9.67□□□□□ -0.86
SMAD6-204ENST00000559931 TOMM6Q96B49 74 aa9.67□□□□□ -0.86
SMAD6-204ENST00000559931 HIST1H2BLQ99880 126 aa9.67□□□□□ -0.86
SMAD6-204ENST00000559931 OPRPNQ99935 248 aaPredicted RBP9.67□□□□□ -0.86
SMAD6-204ENST00000559931 CDC42SE2Q9NRR3 84 aa9.67□□□□□ -0.86
SMAD6-204ENST00000559931 CSDC2Q9Y534 153 aaKnown RBP9.67□□□□□ -0.86
SMAD6-204ENST00000559931 LINC01549A6NIU2 74 aa9.66□□□□□ -0.86
SMAD6-204ENST00000559931 HBDP02042 147 aa9.66□□□□□ -0.86
SMAD6-204ENST00000559931 PDZD11Q5EBL8 140 aa9.66□□□□□ -0.86
SMAD6-204ENST00000559931 RNASE13Q5GAN3 156 aaKnown RBP9.66□□□□□ -0.86
SMAD6-204ENST00000559931 C6orf223Q8N319 242 aa9.66□□□□□ -0.86
SMAD6-204ENST00000559931 PYGO1Q9Y3Y4 419 aa9.66□□□□□ -0.86
SMAD6-204ENST00000559931 ENHOQ6UWT2 76 aa9.65□□□□□ -0.86
SMAD6-204ENST00000559931 Q6ZN92 141 aa9.65□□□□□ -0.86
SMAD6-204ENST00000559931 Q6ZUT4 128 aa9.65□□□□□ -0.86
SMAD6-204ENST00000559931 NFE4Q86UQ8 179 aa9.65□□□□□ -0.86
SMAD6-204ENST00000559931 FAM19A2Q8N3H0 131 aa9.65□□□□□ -0.86
SMAD6-204ENST00000559931 RMI2Q96E14 147 aa9.65□□□□□ -0.86
SMAD6-204ENST00000559931 IGKV2D-24A0A075B6R9 120 aa9.64□□□□□ -0.87
SMAD6-204ENST00000559931 MIAQ16674 131 aa9.64□□□□□ -0.87
SMAD6-204ENST00000559931 ERASQ7Z444 233 aa9.64□□□□□ -0.87
SMAD6-204ENST00000559931 TMEM141Q96I45 108 aa9.64□□□□□ -0.87
SMAD6-204ENST00000559931 VCX2Q9H322 139 aa9.64□□□□□ -0.87
SMAD6-204ENST00000559931 DNAH10Q8IVF4 4471 aa9.63□□□□□ -0.87
SMAD6-204ENST00000559931 IGLV10-54A0A075B6I4 117 aa9.63□□□□□ -0.87
SMAD6-204ENST00000559931 IGIPA6NJ69 53 aa9.63□□□□□ -0.87
SMAD6-204ENST00000559931 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.63□□□□□ -0.87
SMAD6-204ENST00000559931 PSCAO43653 123 aa9.63□□□□□ -0.87
SMAD6-204ENST00000559931 NUPR1O60356 82 aa9.63□□□□□ -0.87
SMAD6-204ENST00000559931 MRPS36P82909 103 aaKnown RBP9.63□□□□□ -0.87
SMAD6-204ENST00000559931 PAPPA-AS1Q5QFB9 102 aa9.63□□□□□ -0.87
SMAD6-204ENST00000559931 C1orf43Q9BWL3 253 aa9.63□□□□□ -0.87
SMAD6-204ENST00000559931 TM2D2Q9BX73 214 aa9.63□□□□□ -0.87
SMAD6-204ENST00000559931 PRR34Q9NV39 138 aa9.63□□□□□ -0.87
SMAD6-204ENST00000559931 IGLV4-3A0A075B6K6 122 aa9.62□□□□□ -0.87
SMAD6-204ENST00000559931 TRAV13-1A0A0B4J241 112 aa9.62□□□□□ -0.87
SMAD6-204ENST00000559931 SS18Q15532 418 aa9.62□□□□□ -0.87
SMAD6-204ENST00000559931 PYY3Q5JQD4 70 aa9.62□□□□□ -0.87
SMAD6-204ENST00000559931 TEX43Q6ZNM6 134 aa9.62□□□□□ -0.87
SMAD6-204ENST00000559931 TIMM17AQ99595 171 aa9.62□□□□□ -0.87
SMAD6-204ENST00000559931 A0A096LNJ9 63 aa9.61□□□□□ -0.87
SMAD6-204ENST00000559931 TRAV8-4A0A0B4J246 113 aa9.61□□□□□ -0.87
SMAD6-204ENST00000559931 ATP5LO75964 103 aa9.61□□□□□ -0.87
SMAD6-204ENST00000559931 LINC00310P59036 64 aa9.61□□□□□ -0.87
SMAD6-204ENST00000559931 JOSD1Q15040 202 aaPredicted RBP9.61□□□□□ -0.87
SMAD6-204ENST00000559931 C2orf88Q9BSF0 95 aa9.61□□□□□ -0.87
SMAD6-204ENST00000559931 COX11Q9Y6N1 276 aa9.61□□□□□ -0.87
SMAD6-204ENST00000559931 FRAS1Q86XX4 4008 aa9.6□□□□□ -0.87
SMAD6-204ENST00000559931 LINC00959A0A1B0GUT2 108 aa9.6□□□□□ -0.87
SMAD6-204ENST00000559931 NPSP0C0P6 89 aa9.6□□□□□ -0.87
SMAD6-204ENST00000559931 ZC2HC1BQ5TFG8 222 aa9.6□□□□□ -0.87
SMAD6-204ENST00000559931 FAM104AQ969W3 186 aa9.6□□□□□ -0.87
SMAD6-204ENST00000559931 LEPROTL1O95214 131 aa9.59□□□□□ -0.87
SMAD6-204ENST00000559931 CCL25O15444 150 aa9.58□□□□□ -0.88
SMAD6-204ENST00000559931 PRSS1P07477 247 aa9.58□□□□□ -0.88
SMAD6-204ENST00000559931 XCL1P47992 114 aa9.58□□□□□ -0.88
SMAD6-204ENST00000559931 CHCHD10Q8WYQ3 142 aaPredicted RBP9.58□□□□□ -0.88
SMAD6-204ENST00000559931 DNAH2Q9P225 4427 aa9.57□□□□□ -0.88
SMAD6-204ENST00000559931 GAGE12HA6NDE8 117 aa9.57□□□□□ -0.88
SMAD6-204ENST00000559931 PMVKQ15126 192 aa9.57□□□□□ -0.88
SMAD6-204ENST00000559931 BAALCQ8WXS3 180 aa9.57□□□□□ -0.88
SMAD6-204ENST00000559931 IFI27L1Q96BM0 104 aa9.57□□□□□ -0.88
SMAD6-204ENST00000559931 AMELXQ99217 191 aa9.57□□□□□ -0.88
SMAD6-204ENST00000559931 HSPB8Q9UJY1 196 aa9.57□□□□□ -0.88
SMAD6-204ENST00000559931 PRSS29PA6NIE9 313 aa9.56□□□□□ -0.88
SMAD6-204ENST00000559931 TSTD3H0UI37 97 aa9.56□□□□□ -0.88
SMAD6-204ENST00000559931 RTL8CO15255 209 aa9.56□□□□□ -0.88
SMAD6-204ENST00000559931 CST9LQ9H4G1 147 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 369.8 ms