RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 LGALS9CQ6DKI2 356 aa11.88□□□□□ -0.51
CHRNA3-206ENST00000559658 TMEM97Q5BJF2 176 aa11.87□□□□□ -0.51
CHRNA3-206ENST00000559658 AMMECR1LQ6DCA0 310 aa11.87□□□□□ -0.51
CHRNA3-206ENST00000559658 AMELXQ99217 191 aa11.87□□□□□ -0.51
CHRNA3-206ENST00000559658 TIMM21Q9BVV7 248 aa11.87□□□□□ -0.51
CHRNA3-206ENST00000559658 TENM2Q9NT68 2774 aa11.87□□□□□ -0.51
CHRNA3-206ENST00000559658 IGLV4-69A0A075B6H9 119 aa11.87□□□□□ -0.51
CHRNA3-206ENST00000559658 PMVKQ15126 192 aa11.87□□□□□ -0.51
CHRNA3-206ENST00000559658 LELP1Q5T871 98 aa11.87□□□□□ -0.51
CHRNA3-206ENST00000559658 TEX43Q6ZNM6 134 aa11.87□□□□□ -0.51
CHRNA3-206ENST00000559658 SH2D6Q7Z4S9 175 aa11.87□□□□□ -0.51
CHRNA3-206ENST00000559658 WFDC10BQ8IUB3 73 aa11.87□□□□□ -0.51
CHRNA3-206ENST00000559658 TRAV12-1A0A0B4J245 112 aa11.86□□□□□ -0.51
CHRNA3-206ENST00000559658 LINC01549A6NIU2 74 aa11.86□□□□□ -0.51
CHRNA3-206ENST00000559658 TCTAP57738 103 aa11.86□□□□□ -0.51
CHRNA3-206ENST00000559658 CDC42SE2Q9NRR3 84 aa11.86□□□□□ -0.51
CHRNA3-206ENST00000559658 PLECQ15149 4684 aaKnown RBP11.86□□□□□ -0.51
CHRNA3-206ENST00000559658 hDV102S1A0JD36 115 aa11.85□□□□□ -0.51
CHRNA3-206ENST00000559658 TMEM262E9PQX1 116 aa11.85□□□□□ -0.51
CHRNA3-206ENST00000559658 RBX1P62877 108 aa11.85□□□□□ -0.51
CHRNA3-206ENST00000559658 DGAT2L7PQ6IED9 249 aa11.85□□□□□ -0.51
CHRNA3-206ENST00000559658 OR5A1Q8NGJ0 315 aa11.85□□□□□ -0.51
CHRNA3-206ENST00000559658 CHTOPQ9Y3Y2 248 aaKnown RBP11.85□□□□□ -0.51
CHRNA3-206ENST00000559658 C20orf202A1L168 122 aa11.85□□□□□ -0.51
CHRNA3-206ENST00000559658 VCX2Q9H322 139 aa11.85□□□□□ -0.51
CHRNA3-206ENST00000559658 F8VRH5 84 aa11.84□□□□□ -0.51
CHRNA3-206ENST00000559658 H7C423 109 aa11.84□□□□□ -0.51
CHRNA3-206ENST00000559658 MRPS36P82909 103 aaKnown RBP11.84□□□□□ -0.51
CHRNA3-206ENST00000559658 CLPSL2Q6UWE3 100 aa11.84□□□□□ -0.51
CHRNA3-206ENST00000559658 CSDC2Q9Y534 153 aaKnown RBP11.84□□□□□ -0.51
CHRNA3-206ENST00000559658 A0A0J9YXV3 536 aa11.83□□□□□ -0.52
CHRNA3-206ENST00000559658 ZNF664Q8N3J9 261 aa11.83□□□□□ -0.52
CHRNA3-206ENST00000559658 C15orf53Q8NAA6 179 aa11.83□□□□□ -0.52
CHRNA3-206ENST00000559658 IGKV3OR2-268A0A0C4DH90 116 aa11.83□□□□□ -0.52
CHRNA3-206ENST00000559658 C11orf86A6NJI1 115 aa11.83□□□□□ -0.52
CHRNA3-206ENST00000559658 PAM16Q9Y3D7 125 aa11.83□□□□□ -0.52
CHRNA3-206ENST00000559658 TIRAPP58753 221 aa11.82□□□□□ -0.52
CHRNA3-206ENST00000559658 STPG4Q8N801 248 aa11.82□□□□□ -0.52
CHRNA3-206ENST00000559658 LINC00588Q9Y4M8 146 aa11.82□□□□□ -0.52
CHRNA3-206ENST00000559658 IGKCP01834 107 aa11.81□□□□□ -0.52
CHRNA3-206ENST00000559658 ZNF25P17030 456 aaPredicted RBP11.81□□□□□ -0.52
CHRNA3-206ENST00000559658 TMEM101Q96IK0 257 aa11.81□□□□□ -0.52
CHRNA3-206ENST00000559658 TRAV13-1A0A0B4J241 112 aa11.8□□□□□ -0.52
CHRNA3-206ENST00000559658 DPM2O94777 84 aa11.8□□□□□ -0.52
CHRNA3-206ENST00000559658 IGHV3-30P01768 117 aa11.8□□□□□ -0.52
CHRNA3-206ENST00000559658 IGHV3-33P01772 117 aa11.8□□□□□ -0.52
CHRNA3-206ENST00000559658 NPSP0C0P6 89 aa11.8□□□□□ -0.52
CHRNA3-206ENST00000559658 IGHV3-30-3P0DP02 117 aa11.8□□□□□ -0.52
CHRNA3-206ENST00000559658 IGHV3-30-5P0DP03 117 aa11.8□□□□□ -0.52
CHRNA3-206ENST00000559658 ZFAND6Q6FIF0 208 aa11.8□□□□□ -0.52
CHRNA3-206ENST00000559658 TP73-AS1Q9UF72 201 aa11.8□□□□□ -0.52
CHRNA3-206ENST00000559658 UBE2D1P51668 147 aa11.8□□□□□ -0.52
CHRNA3-206ENST00000559658 APLNQ9ULZ1 77 aa11.8□□□□□ -0.52
CHRNA3-206ENST00000559658 ANKRD39Q53RE8 183 aa11.79□□□□□ -0.52
CHRNA3-206ENST00000559658 CHAC1Q9BUX1 264 aa11.79□□□□□ -0.52
CHRNA3-206ENST00000559658 VAMP8Q9BV40 100 aa11.79□□□□□ -0.52
CHRNA3-206ENST00000559658 DNAH1Q9P2D7 4330 aa11.79□□□□□ -0.52
CHRNA3-206ENST00000559658 A0A1B0GUV1 79 aa11.78□□□□□ -0.52
CHRNA3-206ENST00000559658 PAPPA-AS1Q5QFB9 102 aa11.78□□□□□ -0.52
CHRNA3-206ENST00000559658 TRAV9-2A0A087WT02 112 aa11.78□□□□□ -0.52
CHRNA3-206ENST00000559658 IGLC3P0DOY3 106 aa11.78□□□□□ -0.52
CHRNA3-206ENST00000559658 COX6A2Q02221 97 aa11.78□□□□□ -0.52
CHRNA3-206ENST00000559658 LINC00269Q8N2A0 174 aa11.78□□□□□ -0.52
CHRNA3-206ENST00000559658 TRAV8-6A0A0B4J262 113 aa11.77□□□□□ -0.53
CHRNA3-206ENST00000559658 ANGP03950 147 aaKnown RBP11.77□□□□□ -0.53
CHRNA3-206ENST00000559658 PLNP26678 52 aa11.77□□□□□ -0.53
CHRNA3-206ENST00000559658 C2orf88Q9BSF0 95 aa11.77□□□□□ -0.53
CHRNA3-206ENST00000559658 PRO1933Q9H354 126 aa11.77□□□□□ -0.53
CHRNA3-206ENST00000559658 SPATA45Q537H7 98 aa11.76□□□□□ -0.53
CHRNA3-206ENST00000559658 LINC00242Q5T6M2 205 aa11.76□□□□□ -0.53
CHRNA3-206ENST00000559658 NUPR2A6NF83 97 aa11.76□□□□□ -0.53
CHRNA3-206ENST00000559658 ZNF22P17026 224 aaPredicted RBP11.76□□□□□ -0.53
CHRNA3-206ENST00000559658 NFE4Q86UQ8 179 aa11.76□□□□□ -0.53
CHRNA3-206ENST00000559658 IGKV2D-26A0A0A0MRZ7 120 aa11.75□□□□□ -0.53
CHRNA3-206ENST00000559658 SMAGPQ0VAQ4 97 aa11.75□□□□□ -0.53
CHRNA3-206ENST00000559658 KLK12Q9UKR0 248 aa11.75□□□□□ -0.53
CHRNA3-206ENST00000559658 S100A12P80511 92 aa11.74□□□□□ -0.53
CHRNA3-206ENST00000559658 MRPS16Q9Y3D3 137 aaKnown RBP11.74□□□□□ -0.53
CHRNA3-206ENST00000559658 TMEM170BQ5T4T1 132 aa11.74□□□□□ -0.53
CHRNA3-206ENST00000559658 LINC00959A0A1B0GUT2 108 aa11.73□□□□□ -0.53
CHRNA3-206ENST00000559658 TTTY13Q9BZ97 58 aa11.73□□□□□ -0.53
CHRNA3-206ENST00000559658 IGLV10-54A0A075B6I4 117 aa11.72□□□□□ -0.53
CHRNA3-206ENST00000559658 IGHV3-64A0A075B6Q5 118 aa11.72□□□□□ -0.53
CHRNA3-206ENST00000559658 TINCRA0A1B0GVN0 87 aa11.72□□□□□ -0.53
CHRNA3-206ENST00000559658 CCL18P55774 89 aa11.72□□□□□ -0.53
CHRNA3-206ENST00000559658 REG3AQ06141 175 aa11.72□□□□□ -0.53
CHRNA3-206ENST00000559658 CDKN2A-AS1Q9UH64 79 aa11.72□□□□□ -0.53
CHRNA3-206ENST00000559658 ENHOQ6UWT2 76 aa11.71□□□□□ -0.53
CHRNA3-206ENST00000559658 C14orf144Q96I85 54 aa11.71□□□□□ -0.53
CHRNA3-206ENST00000559658 LINC01556Q5JQF7 62 aa11.7□□□□□ -0.54
CHRNA3-206ENST00000559658 FAM19A3Q7Z5A8 133 aa11.7□□□□□ -0.54
CHRNA3-206ENST00000559658 LINC00469Q8N7U9 141 aa11.7□□□□□ -0.54
CHRNA3-206ENST00000559658 KLK5Q9Y337 293 aaPredicted RBP11.7□□□□□ -0.54
CHRNA3-206ENST00000559658 TRAV8-3A0A0A6YYJ7 113 aa11.7□□□□□ -0.54
CHRNA3-206ENST00000559658 XCL1P47992 114 aa11.7□□□□□ -0.54
CHRNA3-206ENST00000559658 MUC7Q8TAX7 377 aa11.7□□□□□ -0.54
CHRNA3-206ENST00000559658 GEMIN7Q9H840 131 aaKnown RBP11.7□□□□□ -0.54
CHRNA3-206ENST00000559658 PRR34Q9NV39 138 aa11.7□□□□□ -0.54
CHRNA3-206ENST00000559658 IGLV5-45A0A087WSX0 123 aa11.69□□□□□ -0.54
CHRNA3-206ENST00000559658 TMEM223A0PJW6 202 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms