RNA–Protein interactions for RNA: ENST00000559361.5

PSEN1-224, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-224ENST00000559361 AP5S1Q9NUS5 200 aa11.34□□□□□ -0.59
PSEN1-224ENST00000559361 LINC00614P0C842 121 aa11.33□□□□□ -0.6
PSEN1-224ENST00000559361 MRPL52Q86TS9 123 aaKnown RBP11.33□□□□□ -0.6
PSEN1-224ENST00000559361 CSDC2Q9Y534 153 aaKnown RBP11.33□□□□□ -0.6
PSEN1-224ENST00000559361 XGP55808 180 aa11.32□□□□□ -0.6
PSEN1-224ENST00000559361 GAGE6Q13070 117 aa11.32□□□□□ -0.6
PSEN1-224ENST00000559361 AMMECR1LQ6DCA0 310 aa11.32□□□□□ -0.6
PSEN1-224ENST00000559361 CHCHD1Q96BP2 118 aaKnown RBP11.32□□□□□ -0.6
PSEN1-224ENST00000559361 TIMM21Q9BVV7 248 aa11.32□□□□□ -0.6
PSEN1-224ENST00000559361 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.31□□□□□ -0.6
PSEN1-224ENST00000559361 IGKV2-29A2NJV5 120 aaPredicted RBP11.31□□□□□ -0.6
PSEN1-224ENST00000559361 FGF6P10767 208 aa11.31□□□□□ -0.6
PSEN1-224ENST00000559361 RBX1P62877 108 aa11.31□□□□□ -0.6
PSEN1-224ENST00000559361 MPV17L2Q567V2 206 aa11.31□□□□□ -0.6
PSEN1-224ENST00000559361 DEFB104AQ8WTQ1 72 aa11.31□□□□□ -0.6
PSEN1-224ENST00000559361 TMEM101Q96IK0 257 aa11.31□□□□□ -0.6
PSEN1-224ENST00000559361 SPANXA1Q9NS26 97 aa11.31□□□□□ -0.6
PSEN1-224ENST00000559361 CYSLTR1Q9Y271 337 aa11.31□□□□□ -0.6
PSEN1-224ENST00000559361 NPSP0C0P6 89 aa11.3□□□□□ -0.6
PSEN1-224ENST00000559361 BAGE3Q86Y29 109 aa11.3□□□□□ -0.6
PSEN1-224ENST00000559361 C1orf196B1AJZ1 125 aa11.29□□□□□ -0.6
PSEN1-224ENST00000559361 RNASEKQ6P5S7 137 aaKnown RBP11.29□□□□□ -0.6
PSEN1-224ENST00000559361 OR5A1Q8NGJ0 315 aa11.29□□□□□ -0.6
PSEN1-224ENST00000559361 PYGO1Q9Y3Y4 419 aa11.29□□□□□ -0.6
PSEN1-224ENST00000559361 IBA57-AS1B1ANH7 110 aa11.28□□□□□ -0.6
PSEN1-224ENST00000559361 IGHV3-30P01768 117 aa11.28□□□□□ -0.6
PSEN1-224ENST00000559361 IGHV3-33P01772 117 aa11.28□□□□□ -0.6
PSEN1-224ENST00000559361 IGHV3-30-3P0DP02 117 aa11.28□□□□□ -0.6
PSEN1-224ENST00000559361 IGHV3-30-5P0DP03 117 aa11.28□□□□□ -0.6
PSEN1-224ENST00000559361 DGAT2L7PQ6IED9 249 aa11.28□□□□□ -0.6
PSEN1-224ENST00000559361 C2orf66Q6UXQ4 117 aa11.28□□□□□ -0.6
PSEN1-224ENST00000559361 Q6ZRN7 208 aaPredicted RBP11.28□□□□□ -0.6
PSEN1-224ENST00000559361 UBE2D4Q9Y2X8 147 aa11.28□□□□□ -0.6
PSEN1-224ENST00000559361 TRAV8-3A0A0A6YYJ7 113 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 HIST1H2BKO60814 126 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 ANGP03950 147 aaKnown RBP11.27□□□□□ -0.61
PSEN1-224ENST00000559361 HIST1H2BJP06899 126 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 HIST1H2BOP23527 126 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 HIST1H2BBP33778 126 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 HIST1H2BDP58876 126 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 HIST1H2BCP62807 126 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 HIST2H2BEQ16778 126 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.27□□□□□ -0.61
PSEN1-224ENST00000559361 Q5VSD8 79 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 Q8N976 141 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 HIST1H2BHQ93079 126 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 TOMM6Q96B49 74 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 HIST1H2BNQ99877 126 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 HIST1H2BMQ99879 126 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 PGPEP1Q9NXJ5 209 aa11.27□□□□□ -0.61
PSEN1-224ENST00000559361 CRPP02741 224 aa11.26□□□□□ -0.61
PSEN1-224ENST00000559361 MRPS36P82909 103 aaKnown RBP11.26□□□□□ -0.61
PSEN1-224ENST00000559361 NFE4Q86UQ8 179 aa11.26□□□□□ -0.61
PSEN1-224ENST00000559361 URB1-AS1Q96HZ7 61 aa11.26□□□□□ -0.61
PSEN1-224ENST00000559361 PRR34Q9NV39 138 aa11.26□□□□□ -0.61
PSEN1-224ENST00000559361 HSBP1O75506 76 aa11.25□□□□□ -0.61
PSEN1-224ENST00000559361 HBDP02042 147 aa11.25□□□□□ -0.61
PSEN1-224ENST00000559361 RPL39P62891 51 aaKnown RBP11.25□□□□□ -0.61
PSEN1-224ENST00000559361 PAPPA-AS1Q5QFB9 102 aa11.25□□□□□ -0.61
PSEN1-224ENST00000559361 KLK12Q9UKR0 248 aa11.25□□□□□ -0.61
PSEN1-224ENST00000559361 IGLV4-60A0A075B6I1 120 aa11.24□□□□□ -0.61
PSEN1-224ENST00000559361 MIAQ16674 131 aa11.24□□□□□ -0.61
PSEN1-224ENST00000559361 ZNF664Q8N3J9 261 aa11.24□□□□□ -0.61
PSEN1-224ENST00000559361 Q8N3U1 123 aa11.24□□□□□ -0.61
PSEN1-224ENST00000559361 RMI2Q96E14 147 aa11.24□□□□□ -0.61
PSEN1-224ENST00000559361 TIMM17AQ99595 171 aa11.24□□□□□ -0.61
PSEN1-224ENST00000559361 CDC42SE2Q9NRR3 84 aa11.24□□□□□ -0.61
PSEN1-224ENST00000559361 COX11Q9Y6N1 276 aa11.24□□□□□ -0.61
PSEN1-224ENST00000559361 Q6ZN92 141 aa11.23□□□□□ -0.61
PSEN1-224ENST00000559361 ERASQ7Z444 233 aa11.23□□□□□ -0.61
PSEN1-224ENST00000559361 LINC00269Q8N2A0 174 aa11.23□□□□□ -0.61
PSEN1-224ENST00000559361 TMEM141Q96I45 108 aa11.23□□□□□ -0.61
PSEN1-224ENST00000559361 TRAV8-4A0A0B4J246 113 aa11.22□□□□□ -0.61
PSEN1-224ENST00000559361 CCL25O15444 150 aa11.22□□□□□ -0.61
PSEN1-224ENST00000559361 SERF1AO75920 110 aa11.22□□□□□ -0.61
PSEN1-224ENST00000559361 REG3AQ06141 175 aa11.22□□□□□ -0.61
PSEN1-224ENST00000559361 CDPF1Q6NVV7 123 aa11.22□□□□□ -0.61
PSEN1-224ENST00000559361 UBE2WQ96B02 151 aa11.22□□□□□ -0.61
PSEN1-224ENST00000559361 IGIPA6NJ69 53 aa11.21□□□□□ -0.61
PSEN1-224ENST00000559361 FUSP35637 526 aaKnown RBP eCLIP11.21□□□□□ -0.61
PSEN1-224ENST00000559361 COA6Q5JTJ3 125 aaKnown RBP11.21□□□□□ -0.61
PSEN1-224ENST00000559361 SCGB3A1Q96QR1 104 aa11.21□□□□□ -0.61
PSEN1-224ENST00000559361 TM2D2Q9BX73 214 aa11.21□□□□□ -0.61
PSEN1-224ENST00000559361 IGLV4-3A0A075B6K6 122 aa11.19□□□□□ -0.62
PSEN1-224ENST00000559361 A0A096LNJ9 63 aa11.19□□□□□ -0.62
PSEN1-224ENST00000559361 ATP5LO75964 103 aa11.19□□□□□ -0.62
PSEN1-224ENST00000559361 KRTAP10-1P60331 282 aa11.19□□□□□ -0.62
PSEN1-224ENST00000559361 ENHOQ6UWT2 76 aa11.19□□□□□ -0.62
PSEN1-224ENST00000559361 Q6ZUT4 128 aa11.19□□□□□ -0.62
PSEN1-224ENST00000559361 C2orf88Q9BSF0 95 aa11.19□□□□□ -0.62
PSEN1-224ENST00000559361 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.18□□□□□ -0.62
PSEN1-224ENST00000559361 LINC00310P59036 64 aa11.18□□□□□ -0.62
PSEN1-224ENST00000559361 PDZD11Q5EBL8 140 aa11.18□□□□□ -0.62
PSEN1-224ENST00000559361 TEX43Q6ZNM6 134 aa11.18□□□□□ -0.62
PSEN1-224ENST00000559361 C1orf43Q9BWL3 253 aa11.18□□□□□ -0.62
PSEN1-224ENST00000559361 PACRGQ96M98 296 aaPredicted RBP11.17□□□□□ -0.62
PSEN1-224ENST00000559361 VCX2Q9H322 139 aa11.17□□□□□ -0.62
PSEN1-224ENST00000559361 Q9HAA7 133 aa11.17□□□□□ -0.62
PSEN1-224ENST00000559361 EREGO14944 169 aa11.16□□□□□ -0.62
PSEN1-224ENST00000559361 SS18Q15532 418 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 82.9 ms