RNA–Protein interactions for RNA: ENST00000559035.5

HMG20A-207, Transcript of high mobility group 20A, humanhuman

TSL 4

Gene HMG20A, Length 563 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-207ENST00000559035 G3V3Q6 166 aa4.38□□□□□ -1.71
HMG20A-207ENST00000559035 TSPAN13O95857 204 aa4.38□□□□□ -1.71
HMG20A-207ENST00000559035 TSHBP01222 138 aa4.38□□□□□ -1.71
HMG20A-207ENST00000559035 TLX1NBP0CAT3 122 aa4.38□□□□□ -1.71
HMG20A-207ENST00000559035 RPL35P42766 123 aaKnown RBP4.38□□□□□ -1.71
HMG20A-207ENST00000559035 EIF5AL1Q6IS14 154 aaKnown RBP4.38□□□□□ -1.71
HMG20A-207ENST00000559035 LYZL1Q6UWQ5 148 aa4.38□□□□□ -1.71
HMG20A-207ENST00000559035 OPRPNQ99935 248 aaPredicted RBP4.38□□□□□ -1.71
HMG20A-207ENST00000559035 MRPL35Q9NZE8 188 aaKnown RBP4.38□□□□□ -1.71
HMG20A-207ENST00000559035 TRBV6-5A0A0K0K1A5 114 aa4.37□□□□□ -1.71
HMG20A-207ENST00000559035 COX7A2LO14548 114 aa4.37□□□□□ -1.71
HMG20A-207ENST00000559035 SPAG11BQ08648 103 aa4.37□□□□□ -1.71
HMG20A-207ENST00000559035 SS18Q15532 418 aa4.37□□□□□ -1.71
HMG20A-207ENST00000559035 CENPWQ5EE01 88 aa4.37□□□□□ -1.71
HMG20A-207ENST00000559035 TMUB2Q71RG4 321 aa4.37□□□□□ -1.71
HMG20A-207ENST00000559035 FAM19A5Q7Z5A7 132 aaPredicted RBP4.37□□□□□ -1.71
HMG20A-207ENST00000559035 C9orf62Q8N4C0 152 aa4.37□□□□□ -1.71
HMG20A-207ENST00000559035 MBD3L1Q8WWY6 194 aa4.37□□□□□ -1.71
HMG20A-207ENST00000559035 S100ZQ8WXG8 99 aa4.37□□□□□ -1.71
HMG20A-207ENST00000559035 BTF3L4Q96K17 158 aa4.37□□□□□ -1.71
HMG20A-207ENST00000559035 CYTL1Q9NRR1 136 aa4.37□□□□□ -1.71
HMG20A-207ENST00000559035 TRBV20OR9-2A0A075B6H5 130 aa4.36□□□□□ -1.71
HMG20A-207ENST00000559035 M0QXV9 152 aa4.36□□□□□ -1.71
HMG20A-207ENST00000559035 PFDN1O60925 122 aa4.36□□□□□ -1.71
HMG20A-207ENST00000559035 SMIM12Q96EX1 92 aa4.36□□□□□ -1.71
HMG20A-207ENST00000559035 TMEM101Q96IK0 257 aa4.36□□□□□ -1.71
HMG20A-207ENST00000559035 ALG5Q9Y673 324 aa4.36□□□□□ -1.71
HMG20A-207ENST00000559035 C1orf196B1AJZ1 125 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 I3L3M4 83 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 ZNF861PO60384 105 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 GIPP09681 153 aaPredicted RBP4.35□□□□□ -1.71
HMG20A-207ENST00000559035 MALP21145 153 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 SMCPP49901 116 aaPredicted RBP4.35□□□□□ -1.71
HMG20A-207ENST00000559035 DEFA1P59665 94 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 C10orf25Q5T742 122 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 OR10D4PQ8NGN7 298 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 MRAP2Q96G30 205 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 FAM210AQ96ND0 272 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 RETNLBQ9BQ08 111 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 RNASE7Q9H1E1 156 aaKnown RBP4.35□□□□□ -1.71
HMG20A-207ENST00000559035 SMDT1Q9H4I9 107 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 TMEM242Q9NWH2 141 aa4.35□□□□□ -1.71
HMG20A-207ENST00000559035 XKRY2A2RUG3 117 aa4.34□□□□□ -1.71
HMG20A-207ENST00000559035 IFNA1P01562 189 aa4.34□□□□□ -1.71
HMG20A-207ENST00000559035 FOXA3P55318 350 aaPredicted RBP4.34□□□□□ -1.71
HMG20A-207ENST00000559035 KRTAP4-1Q9BYQ7 146 aa4.34□□□□□ -1.71
HMG20A-207ENST00000559035 CDIP1Q9H305 208 aa4.34□□□□□ -1.71
HMG20A-207ENST00000559035 C6orf48Q9UBA6 75 aa4.34□□□□□ -1.71
HMG20A-207ENST00000559035 CSDC2Q9Y534 153 aaKnown RBP4.34□□□□□ -1.71
HMG20A-207ENST00000559035 FXYD6-FXYD2A0A087WZ82 144 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 TRBV27A0A0K0K1C4 114 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 A0A1B0GV50 99 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 C7orf77A4D0Y5 90 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 F8WDY8 70 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 POLR2KP53803 58 aaKnown RBP4.33□□□□□ -1.72
HMG20A-207ENST00000559035 UBE2BP63146 152 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 CCL20P78556 96 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 TWIST1Q15672 202 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 KRTAP13-2Q52LG2 175 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 TEX261Q6UWH6 196 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 Q6ZUT4 128 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 C5orf38Q86SI9 138 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 KCNRGQ8N5I3 272 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 SFT2D1Q8WV19 159 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 IMMP2LQ96T52 175 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 NDUFA13Q9P0J0 144 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 UBE2D4Q9Y2X8 147 aa4.33□□□□□ -1.72
HMG20A-207ENST00000559035 PMCHP20382 165 aa4.32□□□□□ -1.72
HMG20A-207ENST00000559035 RNASE13Q5GAN3 156 aaKnown RBP4.32□□□□□ -1.72
HMG20A-207ENST00000559035 C9orf129Q5T035 196 aaKnown RBP4.32□□□□□ -1.72
HMG20A-207ENST00000559035 TYMSOSQ8TAI1 123 aa4.32□□□□□ -1.72
HMG20A-207ENST00000559035 FAM213BQ8TBF2 198 aa4.32□□□□□ -1.72
HMG20A-207ENST00000559035 FAM104AQ969W3 186 aa4.32□□□□□ -1.72
HMG20A-207ENST00000559035 TRAV13-1A0A0B4J241 112 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 IGHV3OR16-9A0A0B4J2B5 98 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 RAB19A4D1S5 217 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 UMAD1C9J7I0 102 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 NDUFA1O15239 70 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 CRYGAP11844 174 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 GNG4P50150 75 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 LINC01547P58512 204 aaPredicted RBP4.31□□□□□ -1.72
HMG20A-207ENST00000559035 SRSF3P84103 164 aaKnown RBP4.31□□□□□ -1.72
HMG20A-207ENST00000559035 LINC00242Q5T6M2 205 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 LCE2CQ5TA81 110 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 UNQ6190/PRO20217Q6UXQ8 127 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 NUDT10Q8NFP7 164 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 ORAOV1Q8WV07 137 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 NUDT11Q96G61 164 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 MANBALQ9NQG1 85 aa4.31□□□□□ -1.72
HMG20A-207ENST00000559035 USH2AO75445 5202 aa4.3□□□□□ -1.72
HMG20A-207ENST00000559035 SSPOA2VEC9 5147 aa4.3□□□□□ -1.72
HMG20A-207ENST00000559035 IGLV7-46A0A075B6I9 117 aa4.3□□□□□ -1.72
HMG20A-207ENST00000559035 K7EN84 100 aa4.3□□□□□ -1.72
HMG20A-207ENST00000559035 NUPR1O60356 82 aa4.3□□□□□ -1.72
HMG20A-207ENST00000559035 CTAG1AP78358 180 aa4.3□□□□□ -1.72
HMG20A-207ENST00000559035 KIAA0087Q14695 138 aa4.3□□□□□ -1.72
HMG20A-207ENST00000559035 TMEM241Q24JQ0 296 aa4.3□□□□□ -1.72
HMG20A-207ENST00000559035 ASB16-AS1Q495Z4 193 aa4.3□□□□□ -1.72
HMG20A-207ENST00000559035 GAGE2EQ4V326 116 aa4.3□□□□□ -1.72
HMG20A-207ENST00000559035 TIMM21Q9BVV7 248 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms