RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 SERF1AO75920 110 aa4.47□□□□□ -1.69
CHRNA3-204ENST00000559002 HBDP02042 147 aa4.47□□□□□ -1.69
CHRNA3-204ENST00000559002 CLPSL2Q6UWE3 100 aa4.47□□□□□ -1.69
CHRNA3-204ENST00000559002 UBE2WQ96B02 151 aa4.47□□□□□ -1.69
CHRNA3-204ENST00000559002 TOMM6Q96B49 74 aa4.47□□□□□ -1.69
CHRNA3-204ENST00000559002 SCGB3A1Q96QR1 104 aa4.47□□□□□ -1.69
CHRNA3-204ENST00000559002 TIMM21Q9BVV7 248 aa4.47□□□□□ -1.69
CHRNA3-204ENST00000559002 Q9HAA7 133 aa4.47□□□□□ -1.69
CHRNA3-204ENST00000559002 UBE2D4Q9Y2X8 147 aa4.47□□□□□ -1.69
CHRNA3-204ENST00000559002 DNAH17Q9UFH2 4485 aa4.46□□□□□ -1.69
CHRNA3-204ENST00000559002 IGLV4-60A0A075B6I1 120 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 TRAV8-3A0A0A6YYJ7 113 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 IGKV3OR2-268A0A0C4DH90 116 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 IBA57-AS1B1ANH7 110 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 NDUFA6P56556 154 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 PMCHL1Q16048 86 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 PAPPA-AS1Q5QFB9 102 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 Q6ZN92 141 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 Q6ZUT4 128 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 LINC00269Q8N2A0 174 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 ZNF664Q8N3J9 261 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 RMI2Q96E14 147 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 KRTAP1-5Q9BYS1 174 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 PYGO1Q9Y3Y4 419 aa4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 CSDC2Q9Y534 153 aaKnown RBP4.46□□□□□ -1.7
CHRNA3-204ENST00000559002 IGKV2D-24A0A075B6R9 120 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 A0A096LNJ9 63 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 IFITM10A6NMD0 228 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 NUPR1O60356 82 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 S100A6P06703 90 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 NPSP0C0P6 89 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 LINC00310P59036 64 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 MRPS36P82909 103 aaKnown RBP4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 REG3AQ06141 175 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 MIAQ16674 131 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 RNASE13Q5GAN3 156 aaKnown RBP4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 TEX43Q6ZNM6 134 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 Q6ZR54 194 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 ERASQ7Z444 233 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 NFE4Q86UQ8 179 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 C6orf223Q8N319 242 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 FAM19A2Q8N3H0 131 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 TMEM141Q96I45 108 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 TIMM17AQ99595 171 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 CDC42SE2Q9NRR3 84 aa4.45□□□□□ -1.7
CHRNA3-204ENST00000559002 HYDINQ4G0P3 5121 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 IGLV10-54A0A075B6I4 117 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 IGLV4-3A0A075B6K6 122 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 IGIPA6NJ69 53 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 PSCAO43653 123 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 ATP5LO75964 103 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 PDZD11Q5EBL8 140 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 C1orf134Q5TEV5 83 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 ENHOQ6UWT2 76 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 OPRPNQ99935 248 aaPredicted RBP4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 C2orf88Q9BSF0 95 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 C1orf43Q9BWL3 253 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 TM2D2Q9BX73 214 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 VCX2Q9H322 139 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 PRR34Q9NV39 138 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 COX11Q9Y6N1 276 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 FRAS1Q86XX4 4008 aa4.44□□□□□ -1.7
CHRNA3-204ENST00000559002 TRAV13-1A0A0B4J241 112 aa4.43□□□□□ -1.7
CHRNA3-204ENST00000559002 TRAV8-4A0A0B4J246 113 aa4.43□□□□□ -1.7
CHRNA3-204ENST00000559002 LEPROTL1O95214 131 aa4.43□□□□□ -1.7
CHRNA3-204ENST00000559002 FABP4P15090 132 aa4.43□□□□□ -1.7
CHRNA3-204ENST00000559002 SS18Q15532 418 aa4.43□□□□□ -1.7
CHRNA3-204ENST00000559002 COA6Q5JTJ3 125 aaKnown RBP4.43□□□□□ -1.7
CHRNA3-204ENST00000559002 HSPB8Q9UJY1 196 aa4.43□□□□□ -1.7
CHRNA3-204ENST00000559002 LINC00959A0A1B0GUT2 108 aa4.42□□□□□ -1.7
CHRNA3-204ENST00000559002 CCL25O15444 150 aa4.42□□□□□ -1.7
CHRNA3-204ENST00000559002 PRSS1P07477 247 aa4.42□□□□□ -1.7
CHRNA3-204ENST00000559002 S100A2P29034 98 aa4.42□□□□□ -1.7
CHRNA3-204ENST00000559002 XCL1P47992 114 aa4.42□□□□□ -1.7
CHRNA3-204ENST00000559002 PMVKQ15126 192 aa4.42□□□□□ -1.7
CHRNA3-204ENST00000559002 BAALCQ8WXS3 180 aa4.42□□□□□ -1.7
CHRNA3-204ENST00000559002 CHCHD10Q8WYQ3 142 aaPredicted RBP4.42□□□□□ -1.7
CHRNA3-204ENST00000559002 FAM104AQ969W3 186 aa4.42□□□□□ -1.7
CHRNA3-204ENST00000559002 IFI27L1Q96BM0 104 aa4.42□□□□□ -1.7
CHRNA3-204ENST00000559002 RYR3Q15413 4870 aa4.42□□□□□ -1.7
CHRNA3-204ENST00000559002 FAT2Q9NYQ8 4349 aa4.41□□□□□ -1.7
CHRNA3-204ENST00000559002 GAGE12HA6NDE8 117 aa4.41□□□□□ -1.7
CHRNA3-204ENST00000559002 H0Y8G0 127 aa4.41□□□□□ -1.7
CHRNA3-204ENST00000559002 ZC2HC1BQ5TFG8 222 aa4.41□□□□□ -1.7
CHRNA3-204ENST00000559002 LINC00173Q6ZV60 143 aa4.41□□□□□ -1.7
CHRNA3-204ENST00000559002 PACRGQ96M98 296 aaPredicted RBP4.41□□□□□ -1.7
CHRNA3-204ENST00000559002 AMELXQ99217 191 aa4.41□□□□□ -1.7
CHRNA3-204ENST00000559002 TMA7Q9Y2S6 64 aaKnown RBP4.41□□□□□ -1.7
CHRNA3-204ENST00000559002 DNAH11Q96DT5 4516 aa4.4□□□□□ -1.7
CHRNA3-204ENST00000559002 PRSS29PA6NIE9 313 aa4.4□□□□□ -1.71
CHRNA3-204ENST00000559002 UBE2D1P51668 147 aa4.4□□□□□ -1.71
CHRNA3-204ENST00000559002 SNRPEP62304 92 aaKnown RBP4.4□□□□□ -1.71
CHRNA3-204ENST00000559002 SEC11AP67812 179 aa4.4□□□□□ -1.71
CHRNA3-204ENST00000559002 CD164L2Q6UWJ8 174 aa4.4□□□□□ -1.71
CHRNA3-204ENST00000559002 HIST3H2BBQ8N257 126 aa4.4□□□□□ -1.71
CHRNA3-204ENST00000559002 MAP1LC3CQ9BXW4 147 aa4.4□□□□□ -1.71
CHRNA3-204ENST00000559002 CST9LQ9H4G1 147 aa4.4□□□□□ -1.71
CHRNA3-204ENST00000559002 GEMIN7Q9H840 131 aaKnown RBP4.4□□□□□ -1.71
CHRNA3-204ENST00000559002 HECTD4Q9Y4D8 3996 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms