RNA–Protein interactions for RNA: ENST00000558894.5

SMAD3-209, Transcript of SMAD family member 3, humanhuman

TSL 5

Gene SMAD3, Length 797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-209ENST00000558894 PRO1933Q9H354 126 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 RPS10P5Q9NQ39 176 aa3.57□□□□□ -1.84
SMAD3-209ENST00000558894 USP17L23D6RBM5 183 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 TMEM262E9PQX1 116 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 F5H697 171 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 K7EN84 100 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 SCGB1D1O95968 90 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 SLPIP03973 132 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 PLA2G1BP04054 148 aaKnown RBP3.56□□□□□ -1.84
SMAD3-209ENST00000558894 SULT1A2P50226 295 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 GAGE6Q13070 117 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 MIAQ16674 131 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 OCIAD2Q56VL3 154 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 SPANXN1Q5VSR9 72 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 SDIM1Q6ZPB5 146 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 LINC00269Q8N2A0 174 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 C9orf163Q8N9P6 203 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 C20orf203Q8NBC4 194 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 DEFB104AQ8WTQ1 72 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 TMEM18Q96B42 140 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 DAZAP1Q96EP5 407 aaKnown RBP3.56□□□□□ -1.84
SMAD3-209ENST00000558894 CHCHD5Q9BSY4 110 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 C1orf43Q9BWL3 253 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 CNFNQ9BYD5 112 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 MANBALQ9NQG1 85 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 GNG13Q9P2W3 67 aa3.56□□□□□ -1.84
SMAD3-209ENST00000558894 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP3.56□□□□□ -1.84
SMAD3-209ENST00000558894 LRP2P98164 4655 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 IGLV4-60A0A075B6I1 120 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 A0A1B0GUV1 79 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 C7orf77A4D0Y5 90 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 ANGP03950 147 aaKnown RBP3.55□□□□□ -1.84
SMAD3-209ENST00000558894 SMIM17P0DL12 118 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 FABP4P15090 132 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 NTF3P20783 257 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 CTRLP40313 264 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 MEF2BQ02080 365 aaPredicted RBP3.55□□□□□ -1.84
SMAD3-209ENST00000558894 CIRBPQ14011 172 aaKnown RBP3.55□□□□□ -1.84
SMAD3-209ENST00000558894 TMEM97Q5BJF2 176 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 DGAT2L7PQ6IED9 249 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 LYZL1Q6UWQ5 148 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 FER1L6-AS1Q8NA97 138 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 LYPD6BQ8NI32 183 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 GTSF1Q8WW33 167 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 AP1S3Q96PC3 154 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 IMMP2LQ96T52 175 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 HIST1H2BLQ99880 126 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 CST9LQ9H4G1 147 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 TMEM242Q9NWH2 141 aa3.55□□□□□ -1.84
SMAD3-209ENST00000558894 TRBV25-1A0A075B6N4 114 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 IGHV1-24A0A0C4DH33 117 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 F2Z2F3 143 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 CCL25O15444 150 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 PDE6DO43924 150 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HIST1H2BKO60814 126 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HLA-DQA1P01909 254 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 CRPP02741 224 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HIST1H2BJP06899 126 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 BCL2P10415 239 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 MALP21145 153 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HIST1H2BOP23527 126 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HIST1H2BBP33778 126 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 RPS10P46783 165 aaKnown RBP3.54□□□□□ -1.84
SMAD3-209ENST00000558894 GNG4P50150 75 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 FOXA3P55318 350 aaPredicted RBP3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HIST1H2BDP58876 126 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 CNBPP62633 177 aaKnown RBP3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HIST1H2BCP62807 126 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 CACNG7P62955 275 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 REG3AQ06141 175 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HIST2H2BEQ16778 126 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 RNF151Q2KHN1 245 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.54□□□□□ -1.84
SMAD3-209ENST00000558894 RASL11AQ6T310 242 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 CLPSL2Q6UWE3 100 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 OCC1Q8TAD7 63 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HIST1H2BHQ93079 126 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 PGLYRP4Q96LB8 373 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HIST1H2BNQ99877 126 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 HIST1H2BMQ99879 126 aa3.54□□□□□ -1.84
SMAD3-209ENST00000558894 IGLV10-54A0A075B6I4 117 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 GAS8-AS1O95177 125 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 P01737 135 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 MGPP08493 103 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 MT1HL1P0DM35 61 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 C14orf177Q52M58 125 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 KCNIP4Q6PIL6 250 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 C15orf56Q8N910 161 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 GATD1Q8NB37 220 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 BTF3L4Q96K17 158 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 TPPP3Q9BW30 176 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 RNASE7Q9H1E1 156 aaKnown RBP3.53□□□□□ -1.84
SMAD3-209ENST00000558894 DPH3P1Q9H4G8 78 aa3.53□□□□□ -1.84
SMAD3-209ENST00000558894 TRBV24-1A0A075B6N3 115 aa3.52□□□□□ -1.85
SMAD3-209ENST00000558894 TRAV8-4A0A0B4J246 113 aa3.52□□□□□ -1.85
SMAD3-209ENST00000558894 TRAV26-2A0A0B4J265 109 aa3.52□□□□□ -1.85
SMAD3-209ENST00000558894 FAM231BA6NCW3 169 aa3.52□□□□□ -1.85
SMAD3-209ENST00000558894 H7C1H1 209 aa3.52□□□□□ -1.85
SMAD3-209ENST00000558894 TSPAN13O95857 204 aa3.52□□□□□ -1.85
SMAD3-209ENST00000558894 OXTP01178 125 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 194.6 ms