RNA–Protein interactions for RNA: ENST00000558847.1

CASC4-206, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 622 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-206ENST00000558847 CFDP00746 253 aaPredicted RBP0.25□□□□□ -2.37
CASC4-206ENST00000558847 SVBPQ8N300 66 aa0.25□□□□□ -2.37
CASC4-206ENST00000558847 TSLPQ969D9 159 aa0.25□□□□□ -2.37
CASC4-206ENST00000558847 GNG8Q9UK08 70 aa0.25□□□□□ -2.37
CASC4-206ENST00000558847 AHCTF1Q8WYP5 2266 aa0.25□□□□□ -2.37
CASC4-206ENST00000558847 DOCK1Q14185 1865 aa0.24□□□□□ -2.37
CASC4-206ENST00000558847 DOCK2Q92608 1830 aa0.24□□□□□ -2.37
CASC4-206ENST00000558847 QRICH2Q9H0J4 1663 aa0.24□□□□□ -2.37
CASC4-206ENST00000558847 SYNE2Q8WXH0 6885 aaKnown RBP0.24□□□□□ -2.37
CASC4-206ENST00000558847 SHANK2Q9UPX8 1470 aa0.24□□□□□ -2.37
CASC4-206ENST00000558847 F6UZH7 168 aa0.24□□□□□ -2.37
CASC4-206ENST00000558847 M0R3E3 92 aa0.24□□□□□ -2.37
CASC4-206ENST00000558847 PPP3R1P63098 170 aa0.24□□□□□ -2.37
CASC4-206ENST00000558847 DCDP81605 110 aaKnown RBP0.24□□□□□ -2.37
CASC4-206ENST00000558847 CELSR2Q9HCU4 2923 aa0.24□□□□□ -2.37
CASC4-206ENST00000558847 WHAMMP3Q1A5X7 153 aa0.23□□□□□ -2.37
CASC4-206ENST00000558847 Q8IZM0 81 aa0.23□□□□□ -2.37
CASC4-206ENST00000558847 DPH3P1Q9H4G8 78 aa0.23□□□□□ -2.37
CASC4-206ENST00000558847 KDM3BQ7LBC6 1761 aa0.22□□□□□ -2.37
CASC4-206ENST00000558847 SFT2D2O95562 160 aa0.22□□□□□ -2.37
CASC4-206ENST00000558847 Q6JHZ5 121 aa0.22□□□□□ -2.37
CASC4-206ENST00000558847 BIVM-ERCC5R4GMW8 1640 aa0.22□□□□□ -2.37
CASC4-206ENST00000558847 ERCC6L2Q5T890 1561 aa0.22□□□□□ -2.37
CASC4-206ENST00000558847 UNC79Q9P2D8 2635 aa0.22□□□□□ -2.37
CASC4-206ENST00000558847 WNK3Q9BYP7 1800 aa0.22□□□□□ -2.37
CASC4-206ENST00000558847 DMBT1Q9UGM3 2413 aaPredicted RBP0.22□□□□□ -2.37
CASC4-206ENST00000558847 MACF1Q9UPN3 7388 aaKnown RBP0.21□□□□□ -2.38
CASC4-206ENST00000558847 CHKB-CPT1BH3BT56 60 aa0.21□□□□□ -2.38
CASC4-206ENST00000558847 BCE1O60756 84 aa0.21□□□□□ -2.38
CASC4-206ENST00000558847 WFDC2Q14508 124 aa0.21□□□□□ -2.38
CASC4-206ENST00000558847 LINC00472Q9H8W2 130 aa0.21□□□□□ -2.38
CASC4-206ENST00000558847 FAIMQ9NVQ4 179 aa0.21□□□□□ -2.38
CASC4-206ENST00000558847 MAPKBP1O60336 1514 aa0.21□□□□□ -2.38
CASC4-206ENST00000558847 C10orf71Q711Q0 1435 aa0.21□□□□□ -2.38
CASC4-206ENST00000558847 RIMS1Q86UR5 1692 aaKnown RBP0.21□□□□□ -2.38
CASC4-206ENST00000558847 MGPP08493 103 aa0.2□□□□□ -2.38
CASC4-206ENST00000558847 GNG11P61952 73 aa0.2□□□□□ -2.38
CASC4-206ENST00000558847 FAM167A-AS1Q96KT0 104 aa0.2□□□□□ -2.38
CASC4-206ENST00000558847 TP53AIP1Q9HCN2 124 aa0.2□□□□□ -2.38
CASC4-206ENST00000558847 LINC00474Q9P2X8 69 aa0.2□□□□□ -2.38
CASC4-206ENST00000558847 LRP6O75581 1613 aa0.2□□□□□ -2.38
CASC4-206ENST00000558847 NHSL1Q5SYE7 1610 aa0.2□□□□□ -2.38
CASC4-206ENST00000558847 HIVEP3Q5T1R4 2406 aa0.19□□□□□ -2.38
CASC4-206ENST00000558847 KIF21AQ7Z4S6 1674 aa0.19□□□□□ -2.38
CASC4-206ENST00000558847 C10orf142B7Z368 130 aa0.19□□□□□ -2.38
CASC4-206ENST00000558847 H3BQ15 152 aa0.19□□□□□ -2.38
CASC4-206ENST00000558847 S100A1P23297 94 aa0.19□□□□□ -2.38
CASC4-206ENST00000558847 NXT2Q9NPJ8 142 aaKnown RBP0.19□□□□□ -2.38
CASC4-206ENST00000558847 CDC42SE2Q9NRR3 84 aa0.19□□□□□ -2.38
CASC4-206ENST00000558847 FSIP2Q5CZC0 6907 aa0.19□□□□□ -2.38
CASC4-206ENST00000558847 PIGYQ3MUY2 71 aa0.18□□□□□ -2.38
CASC4-206ENST00000558847 OTOGQ6ZRI0 2925 aa0.18□□□□□ -2.38
CASC4-206ENST00000558847 FAM135AQ9P2D6 1515 aa0.18□□□□□ -2.38
CASC4-206ENST00000558847 NAP1L6A6NFF2 107 aa0.17□□□□□ -2.38
CASC4-206ENST00000558847 Q5VSD8 79 aa0.17□□□□□ -2.38
CASC4-206ENST00000558847 MYOM1P52179 1685 aa0.17□□□□□ -2.38
CASC4-206ENST00000558847 CUL7Q14999 1698 aa0.17□□□□□ -2.38
CASC4-206ENST00000558847 C2CD3Q4AC94 2353 aa0.17□□□□□ -2.38
CASC4-206ENST00000558847 RAPGEF6Q8TEU7 1601 aa0.16□□□□□ -2.38
CASC4-206ENST00000558847 SCAPERQ9BY12 1400 aa0.16□□□□□ -2.38
CASC4-206ENST00000558847 PLXNB2O15031 1838 aa0.16□□□□□ -2.38
CASC4-206ENST00000558847 LINC00587B1AMM8 73 aa0.16□□□□□ -2.38
CASC4-206ENST00000558847 COX6CP09669 75 aa0.16□□□□□ -2.38
CASC4-206ENST00000558847 TMEM263Q8WUH6 116 aaKnown RBP0.16□□□□□ -2.38
CASC4-206ENST00000558847 SBF2Q86WG5 1849 aa0.15□□□□□ -2.38
CASC4-206ENST00000558847 ANKRD17O75179 2603 aaKnown RBP0.15□□□□□ -2.39
CASC4-206ENST00000558847 GTF2H5Q6ZYL4 71 aa0.15□□□□□ -2.39
CASC4-206ENST00000558847 ROBO1Q9Y6N7 1651 aa0.14□□□□□ -2.39
CASC4-206ENST00000558847 TRBV6-1A0A0K0K1D8 114 aa0.14□□□□□ -2.39
CASC4-206ENST00000558847 DEFB109BQ30KR1 87 aa0.14□□□□□ -2.39
CASC4-206ENST00000558847 MANBALQ9NQG1 85 aa0.14□□□□□ -2.39
CASC4-206ENST00000558847 NRKQ7Z2Y5 1582 aa0.14□□□□□ -2.39
CASC4-206ENST00000558847 HRNRQ86YZ3 2850 aaPredicted RBP0.14□□□□□ -2.39
CASC4-206ENST00000558847 AKAP6Q13023 2319 aa0.14□□□□□ -2.39
CASC4-206ENST00000558847 SHROOM2Q13796 1616 aa0.13□□□□□ -2.39
CASC4-206ENST00000558847 ZNF236Q9UL36 1845 aa0.13□□□□□ -2.39
CASC4-206ENST00000558847 I3L2K1 104 aa0.13□□□□□ -2.39
CASC4-206ENST00000558847 IGLC1P0CG04 106 aa0.13□□□□□ -2.39
CASC4-206ENST00000558847 KRTDAPP60985 99 aa0.13□□□□□ -2.39
CASC4-206ENST00000558847 PRO1854Q9UHT4 67 aa0.13□□□□□ -2.39
CASC4-206ENST00000558847 ARL2-SNX15V9GYD0 113 aa0.13□□□□□ -2.39
CASC4-206ENST00000558847 LRP1Q07954 4544 aaKnown RBP0.12□□□□□ -2.39
CASC4-206ENST00000558847 ABCA2Q9BZC7 2435 aa0.12□□□□□ -2.39
CASC4-206ENST00000558847 Q0VG73 95 aa0.12□□□□□ -2.39
CASC4-206ENST00000558847 SPRR4Q96PI1 79 aa0.12□□□□□ -2.39
CASC4-206ENST00000558847 PZPP20742 1482 aa0.11□□□□□ -2.39
CASC4-206ENST00000558847 C20orf202A1L168 122 aa0.11□□□□□ -2.39
CASC4-206ENST00000558847 TRAPPC2P0DI81 140 aa0.11□□□□□ -2.39
CASC4-206ENST00000558847 TRAPPC2BP0DI82 140 aa0.11□□□□□ -2.39
CASC4-206ENST00000558847 UBE2D3P61077 147 aa0.11□□□□□ -2.39
CASC4-206ENST00000558847 UBE2D2P62837 147 aa0.11□□□□□ -2.39
CASC4-206ENST00000558847 UBA52P62987 128 aaKnown RBP0.11□□□□□ -2.39
CASC4-206ENST00000558847 PSME4Q14997 1843 aa0.1□□□□□ -2.39
CASC4-206ENST00000558847 PTPN13Q12923 2485 aa0.1□□□□□ -2.39
CASC4-206ENST00000558847 LAMC1P11047 1609 aa0.1□□□□□ -2.39
CASC4-206ENST00000558847 FAM223AQ8IWN6 122 aa0.1□□□□□ -2.39
CASC4-206ENST00000558847 PLCE1Q9P212 2302 aa0.1□□□□□ -2.39
CASC4-206ENST00000558847 PTPRQQ9UMZ3 2332 aa0.1□□□□□ -2.39
CASC4-206ENST00000558847 NCOA3Q9Y6Q9 1424 aa0.1□□□□□ -2.39
CASC4-206ENST00000558847 PKDREJQ9NTG1 2253 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms