RNA–Protein interactions for RNA: ENST00000558532.1

HERC1-203, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 3

Gene HERC1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-203ENST00000558532 LINC00308Q8TCZ7 52 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 RNASE6Q93091 150 aaKnown RBP2.27□□□□□ -2.05
HERC1-203ENST00000558532 EEF1AKMT3Q96AZ1 226 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 FAM218AQ96MZ4 157 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 DSCR8Q96T75 97 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 C16orf95Q9H693 158 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 SERP1Q9Y6X1 66 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 MINOS1-NBL1R4GNA1 71 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 REV3LO60673 3130 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 ZGRF1Q86YA3 2104 aa2.27□□□□□ -2.05
HERC1-203ENST00000558532 ARHGAP32A7KAX9 2087 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 TRAV41A0A0B4J266 112 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 IGHV3-16A0A0C4DH30 117 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 FAM236DA0A1B0GTK5 79 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 A0A1W2PPR1 153 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 J3QLI3 93 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 CCL24O00175 119 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 IGF1P05019 195 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 BAALC-AS2P0C853 105 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 FAM236CP0DP71 79 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 S100A4P26447 101 aaKnown RBP2.26□□□□□ -2.05
HERC1-203ENST00000558532 NPC2P61916 151 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 C15orf32Q32M92 178 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 SOSTDC1Q6X4U4 206 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 TMEM86BQ8N661 226 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 Q8N9W7 124 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 Q8NBF4 154 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 LINC00167Q96N53 147 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 S4R3C0 116 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 LAMA3Q16787 3333 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 SPTBN5Q9NRC6 3674 aaKnown RBP2.26□□□□□ -2.05
HERC1-203ENST00000558532 CUL9Q8IWT3 2517 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 USP34Q70CQ2 3546 aa2.26□□□□□ -2.05
HERC1-203ENST00000558532 AHCTF1Q8WYP5 2266 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 FAM223BA6NKX1 122 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 H7BZZ5 65 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 NDUFA4O00483 81 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 GNRH2O43555 120 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 IGHG2P01859 326 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 COX7A1P24310 79 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 ATP5EP56381 51 aaPredicted RBP2.25□□□□□ -2.05
HERC1-203ENST00000558532 SYNJ2BPP57105 145 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 KLRB1Q12918 225 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 SS18Q15532 418 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 S100A7L2Q5SY68 101 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 IGFL3Q6UXB1 125 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 FAM223AQ8IWN6 122 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 Q8N377 158 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 CCL17Q92583 94 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 ZNF625Q96I27 306 aaPredicted RBP2.25□□□□□ -2.05
HERC1-203ENST00000558532 LINC00846Q9NV44 126 aa2.25□□□□□ -2.05
HERC1-203ENST00000558532 IGHV3-64A0A075B6Q5 118 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 TRAV7A0A075B6U4 112 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 SMIM26A0A096LP01 95 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 TRAV13-2A0A0B4J235 113 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 A8MTW9 85 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 E7EQL1 145 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 H0YGX0 51 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 H3BUA1 57 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 RS1O15537 224 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 LY6G6DO95868 133 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 DNAL4O96015 105 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 IGHV3-23P01764 117 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 CD28P10747 220 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 RPL35AP18077 110 aaKnown RBP2.24□□□□□ -2.05
HERC1-203ENST00000558532 BSPH1Q075Z2 132 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 CIRBPQ14011 172 aaKnown RBP2.24□□□□□ -2.05
HERC1-203ENST00000558532 LINC00336Q6ZUF6 198 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 FP248Q71RG6 208 aaPredicted RBP2.24□□□□□ -2.05
HERC1-203ENST00000558532 FDCSPQ8NFU4 85 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 CHCHD7Q9BUK0 85 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 MOB4Q9Y3A3 225 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 NACAE9PAV3 2078 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 ZNF318Q5VUA4 2279 aa2.24□□□□□ -2.05
HERC1-203ENST00000558532 LAMA2P24043 3122 aaKnown RBP2.24□□□□□ -2.05
HERC1-203ENST00000558532 URB1O60287 2271 aaKnown RBP2.23□□□□□ -2.05
HERC1-203ENST00000558532 IGKV2-28A0A075B6P5 120 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 A0A087WVE0 104 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 IGKV2D-28P01615 120 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 TRBV12-3P01733 135 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 CCKP06307 115 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 XCL1P47992 114 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 ATP1A1-AS1Q5TC04 95 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 CLEC19AQ6UXS0 136 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 C1orf158Q8N1D5 194 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.23□□□□□ -2.05
HERC1-203ENST00000558532 TMEM243Q9BU79 118 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 SIRPDQ9H106 197 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 XCL2Q9UBD3 114 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 CDKN2A-AS1Q9UH64 79 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 TECTAO75443 2155 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 WDR87Q6ZQQ6 2873 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 CDH23Q9H251 3354 aa2.23□□□□□ -2.05
HERC1-203ENST00000558532 IGHV3OR16-12A0A075B7B8 117 aa2.22□□□□□ -2.05
HERC1-203ENST00000558532 IGHV1OR15-1A0A075B7D0 117 aa2.22□□□□□ -2.05
HERC1-203ENST00000558532 IGHV3OR16-8A0A075B7F1 116 aa2.22□□□□□ -2.05
HERC1-203ENST00000558532 IGHV3-35A0A0C4DH35 117 aa2.22□□□□□ -2.05
HERC1-203ENST00000558532 IGHV3-66A0A0C4DH42 116 aa2.22□□□□□ -2.05
HERC1-203ENST00000558532 IGKV3D-7A0A0C4DH55 119 aa2.22□□□□□ -2.05
HERC1-203ENST00000558532 RBMY1BA6NDE4 496 aaKnown RBP2.22□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 61 ms