RNA–Protein interactions for RNA: ENST00000558439.5

AP4E1-202, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,165 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-202ENST00000558439 ESM1Q9NQ30 184 aa11.35□□□□□ -0.59
AP4E1-202ENST00000558439 RPL32P62910 135 aaKnown RBP11.34□□□□□ -0.59
AP4E1-202ENST00000558439 RELNP78509 3460 aa11.34□□□□□ -0.59
AP4E1-202ENST00000558439 LINC00315P59091 139 aa11.34□□□□□ -0.59
AP4E1-202ENST00000558439 WFDC10AQ9H1F0 79 aa11.34□□□□□ -0.59
AP4E1-202ENST00000558439 RBMY1BA6NDE4 496 aaKnown RBP11.33□□□□□ -0.6
AP4E1-202ENST00000558439 RBMY1EA6NEQ0 496 aaKnown RBP11.33□□□□□ -0.6
AP4E1-202ENST00000558439 RBMY1DP0C7P1 496 aaKnown RBP11.33□□□□□ -0.6
AP4E1-202ENST00000558439 RBMY1A1P0DJD3 496 aaKnown RBP11.33□□□□□ -0.6
AP4E1-202ENST00000558439 RBMY1CP0DJD4 496 aa11.33□□□□□ -0.6
AP4E1-202ENST00000558439 XCL1P47992 114 aa11.33□□□□□ -0.6
AP4E1-202ENST00000558439 IGHV3-33P01772 117 aa11.32□□□□□ -0.6
AP4E1-202ENST00000558439 RNF152Q8N8N0 203 aa11.32□□□□□ -0.6
AP4E1-202ENST00000558439 MUC4Q99102 2169 aa11.32□□□□□ -0.6
AP4E1-202ENST00000558439 FLNCQ14315 2725 aa11.32□□□□□ -0.6
AP4E1-202ENST00000558439 LINC01546A6NGU7 62 aa11.32□□□□□ -0.6
AP4E1-202ENST00000558439 TMEM86BQ8N661 226 aa11.31□□□□□ -0.6
AP4E1-202ENST00000558439 MT-ATP8P03928 68 aa11.3□□□□□ -0.6
AP4E1-202ENST00000558439 C15orf53Q8NAA6 179 aa11.3□□□□□ -0.6
AP4E1-202ENST00000558439 Q9UF83 564 aa11.3□□□□□ -0.6
AP4E1-202ENST00000558439 ASH1LQ9NR48 2969 aaKnown RBP11.3□□□□□ -0.6
AP4E1-202ENST00000558439 DEFB4AO15263 64 aa11.3□□□□□ -0.6
AP4E1-202ENST00000558439 GAGE2AQ6NT46 116 aa11.3□□□□□ -0.6
AP4E1-202ENST00000558439 NDUFA7O95182 113 aa11.3□□□□□ -0.6
AP4E1-202ENST00000558439 Q6ZSN1 163 aa11.3□□□□□ -0.6
AP4E1-202ENST00000558439 ZNF575Q86XF7 245 aa11.3□□□□□ -0.6
AP4E1-202ENST00000558439 TINCRA0A1B0GVN0 87 aa11.29□□□□□ -0.6
AP4E1-202ENST00000558439 DAZ2Q13117 558 aaKnown RBP11.29□□□□□ -0.6
AP4E1-202ENST00000558439 DAZ4Q86SG3 579 aaKnown RBP11.29□□□□□ -0.6
AP4E1-202ENST00000558439 DAZ3Q9NR90 486 aaKnown RBP11.29□□□□□ -0.6
AP4E1-202ENST00000558439 UBE2D1P51668 147 aa11.29□□□□□ -0.6
AP4E1-202ENST00000558439 SS18Q15532 418 aa11.29□□□□□ -0.6
AP4E1-202ENST00000558439 TEX49A0A1B0GTD5 131 aa11.29□□□□□ -0.6
AP4E1-202ENST00000558439 TRIAP1O43715 76 aa11.28□□□□□ -0.6
AP4E1-202ENST00000558439 CRLF1O75462 422 aa11.28□□□□□ -0.6
AP4E1-202ENST00000558439 MIAQ16674 131 aa11.28□□□□□ -0.6
AP4E1-202ENST00000558439 BRI3O95415 125 aa11.28□□□□□ -0.6
AP4E1-202ENST00000558439 ZNF843Q8N446 348 aa11.28□□□□□ -0.6
AP4E1-202ENST00000558439 FAM19A4Q96LR4 140 aa11.28□□□□□ -0.6
AP4E1-202ENST00000558439 IFITM1P13164 125 aa11.28□□□□□ -0.6
AP4E1-202ENST00000558439 RBMY1FQ15415 496 aaKnown RBP11.28□□□□□ -0.6
AP4E1-202ENST00000558439 TMEM263Q8WUH6 116 aaKnown RBP11.28□□□□□ -0.6
AP4E1-202ENST00000558439 IGLV10-54A0A075B6I4 117 aa11.27□□□□□ -0.61
AP4E1-202ENST00000558439 F5H768 121 aa11.27□□□□□ -0.61
AP4E1-202ENST00000558439 SCGB1A1P11684 91 aa11.27□□□□□ -0.61
AP4E1-202ENST00000558439 A0A0B4J2C4 111 aa11.27□□□□□ -0.61
AP4E1-202ENST00000558439 GYPEP15421 78 aa11.27□□□□□ -0.61
AP4E1-202ENST00000558439 UBE2D4Q9Y2X8 147 aa11.27□□□□□ -0.61
AP4E1-202ENST00000558439 PYGO1Q9Y3Y4 419 aa11.26□□□□□ -0.61
AP4E1-202ENST00000558439 ODF3L2Q3SX64 289 aa11.26□□□□□ -0.61
AP4E1-202ENST00000558439 C16orf74Q96GX8 76 aa11.26□□□□□ -0.61
AP4E1-202ENST00000558439 FLNAP21333 2647 aaKnown RBP11.25□□□□□ -0.61
AP4E1-202ENST00000558439 POM121L12Q8N7R1 296 aa11.25□□□□□ -0.61
AP4E1-202ENST00000558439 TRAV25A0A0B4J276 109 aa11.25□□□□□ -0.61
AP4E1-202ENST00000558439 TRBV10-2A0A0K0K1G8 114 aa11.25□□□□□ -0.61
AP4E1-202ENST00000558439 LOC100131303A0A0U1RQF7 123 aa11.25□□□□□ -0.61
AP4E1-202ENST00000558439 RS1O15537 224 aa11.25□□□□□ -0.61
AP4E1-202ENST00000558439 CRYBA4P53673 196 aa11.25□□□□□ -0.61
AP4E1-202ENST00000558439 BAALC-AS2P0C853 105 aa11.25□□□□□ -0.61
AP4E1-202ENST00000558439 S100A7L2Q5SY68 101 aa11.25□□□□□ -0.61
AP4E1-202ENST00000558439 ANGP03950 147 aaKnown RBP11.24□□□□□ -0.61
AP4E1-202ENST00000558439 SND1-IT1Q9HBX3 110 aa11.24□□□□□ -0.61
AP4E1-202ENST00000558439 MIR7-3HGQ8N6C7 128 aa11.24□□□□□ -0.61
AP4E1-202ENST00000558439 ATP6V0E2Q8NHE4 81 aa11.24□□□□□ -0.61
AP4E1-202ENST00000558439 PIK3CD-AS1Q5SR53 167 aa11.24□□□□□ -0.61
AP4E1-202ENST00000558439 BBC3Q96PG8 261 aaPredicted RBP11.24□□□□□ -0.61
AP4E1-202ENST00000558439 CFAP46Q8IYW2 2715 aa11.23□□□□□ -0.61
AP4E1-202ENST00000558439 DAD1P61803 113 aa11.23□□□□□ -0.61
AP4E1-202ENST00000558439 KLK9Q2XQG4 91 aa11.23□□□□□ -0.61
AP4E1-202ENST00000558439 HECTD1Q9ULT8 2610 aa11.23□□□□□ -0.61
AP4E1-202ENST00000558439 MRPS36P82909 103 aaKnown RBP11.23□□□□□ -0.61
AP4E1-202ENST00000558439 SMG1Q96Q15 3661 aaKnown RBP11.23□□□□□ -0.61
AP4E1-202ENST00000558439 TRBV10-1A0A0K0K1A3 114 aa11.23□□□□□ -0.61
AP4E1-202ENST00000558439 ADAMTSL4-AS1Q5T5F5 129 aa11.23□□□□□ -0.61
AP4E1-202ENST00000558439 TRAV4A0A0B4J268 109 aa11.22□□□□□ -0.61
AP4E1-202ENST00000558439 COX7B2Q8TF08 81 aa11.22□□□□□ -0.61
AP4E1-202ENST00000558439 TRAV13-2A0A0B4J235 113 aa11.21□□□□□ -0.61
AP4E1-202ENST00000558439 J3QKU1 62 aa11.21□□□□□ -0.61
AP4E1-202ENST00000558439 Q9HAA7 133 aa11.21□□□□□ -0.62
AP4E1-202ENST00000558439 LINC00694P0DN24 101 aa11.2□□□□□ -0.62
AP4E1-202ENST00000558439 HERV-K104P63124 156 aa11.2□□□□□ -0.62
AP4E1-202ENST00000558439 LINC00308Q8TCZ7 52 aa11.2□□□□□ -0.62
AP4E1-202ENST00000558439 CHCHD7Q9BUK0 85 aa11.2□□□□□ -0.62
AP4E1-202ENST00000558439 ITPR3Q14573 2671 aa11.2□□□□□ -0.62
AP4E1-202ENST00000558439 LINC01006Q8NI28 216 aa11.2□□□□□ -0.62
AP4E1-202ENST00000558439 UBE2D3P61077 147 aa11.19□□□□□ -0.62
AP4E1-202ENST00000558439 UBE2D2P62837 147 aa11.19□□□□□ -0.62
AP4E1-202ENST00000558439 XGP55808 180 aa11.19□□□□□ -0.62
AP4E1-202ENST00000558439 DEFB135Q30KP9 77 aa11.19□□□□□ -0.62
AP4E1-202ENST00000558439 B5MCH6 92 aa11.19□□□□□ -0.62
AP4E1-202ENST00000558439 PLA2G2AP14555 144 aa11.19□□□□□ -0.62
AP4E1-202ENST00000558439 COX6A2Q02221 97 aa11.19□□□□□ -0.62
AP4E1-202ENST00000558439 C1orf158Q8N1D5 194 aa11.19□□□□□ -0.62
AP4E1-202ENST00000558439 LRRC75A-AS1Q8N1F1 130 aa11.17□□□□□ -0.62
AP4E1-202ENST00000558439 SVIPQ8NHG7 77 aa11.17□□□□□ -0.62
AP4E1-202ENST00000558439 IGSF10Q6WRI0 2623 aa11.17□□□□□ -0.62
AP4E1-202ENST00000558439 ITPR1Q14643 2758 aa11.17□□□□□ -0.62
AP4E1-202ENST00000558439 TRAV26-1A0A087WT03 109 aa11.17□□□□□ -0.62
AP4E1-202ENST00000558439 TRBV30A0A0K0K1B3 111 aa11.17□□□□□ -0.62
AP4E1-202ENST00000558439 TIRAPP58753 221 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms