RNA–Protein interactions for RNA: ENST00000558248.5

LRRC28-205, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 499 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-205ENST00000558248 RPL36A-HNRNPH2H7BZ11 118 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 H7C2G1 150 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 CPSF4O95639 269 aaKnown RBP2.54□□□□□ -2
LRRC28-205ENST00000558248 RBP4P02753 201 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 CD2P06729 351 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 SAA1P0DJI8 122 aaPredicted RBP2.54□□□□□ -2
LRRC28-205ENST00000558248 SNRPD3P62318 126 aaKnown RBP2.54□□□□□ -2
LRRC28-205ENST00000558248 BLCAPP62952 87 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 ZNF79Q15937 498 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 LY6EQ16553 131 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 C2orf83Q53S99 150 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 Q56UQ5 140 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 PABPC1L2AQ5JQF8 200 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 C1orf64Q8NEQ6 169 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 C10orf82Q8WW14 230 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 AQP3Q92482 292 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 RAB37Q96AX2 223 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 MRPS24Q96EL2 167 aaKnown RBP2.54□□□□□ -2
LRRC28-205ENST00000558248 CYYR1Q96J86 154 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 AGPAT4-IT1Q9H0P7 198 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 LY96Q9Y6Y9 160 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 S4R3C0 116 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 STARD9Q9P2P6 4700 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 UBR4Q5T4S7 5183 aa2.54□□□□□ -2
LRRC28-205ENST00000558248 PNMA8CA0A1B0GUJ8 204 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 TCRBV4S1A1TA0A5B7 111 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 C7orf66A4D0T2 115 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 H3BUX3 64 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 PANO1I0J062 215 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 TIMM17BO60830 172 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 CD14P08571 375 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 SLC25A4P12235 298 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 FABP4P15090 132 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 PRB3Q04118 309 aaPredicted RBP2.53□□□□□ -2
LRRC28-205ENST00000558248 ASB16-AS1Q495Z4 193 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 CLLU1Q5K131 121 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 OR8B3Q8NGG8 313 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 ZNF563Q8TA94 476 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 OR8B2Q96RD0 313 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 SNHG12Q9BXW3 62 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 Q9H521 79 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 DNAH7Q8WXX0 4024 aa2.53□□□□□ -2
LRRC28-205ENST00000558248 IGHV3OR16-8A0A075B7F1 116 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 LOC107986453A0A1B0GWG9 222 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 GNRH2O43555 120 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 PCBD1P61457 104 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 ZNF90Q03938 601 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 CATR1Q13166 79 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 KRTAP13-3Q3SY46 172 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 OR5AS1Q8N127 324 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 Q8N2B8 174 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 SEC11CQ9BY50 192 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 TAS2R4Q9NYW5 299 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 METTL1Q9UBP6 276 aaKnown RBP2.52□□□□□ -2.01
LRRC28-205ENST00000558248 TPRKBQ9Y3C4 175 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 V9GYS6 101 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 OBSCNQ5VST9 7968 aa2.52□□□□□ -2.01
LRRC28-205ENST00000558248 A0A1B0GU33 70 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 C11orf86A6NJI1 115 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 C16orf90A8MZG2 172 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 ZNF736B4DX44 427 aaPredicted RBP2.51□□□□□ -2.01
LRRC28-205ENST00000558248 C17orf112F2Z3M2 114 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 HYPMO75409 117 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 UBL3O95164 117 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 SHBGP04278 402 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 HMGN2P05204 90 aaKnown RBP2.51□□□□□ -2.01
LRRC28-205ENST00000558248 IFI6P09912 130 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 SPINK8P0C7L1 97 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 IFITM1P13164 125 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 MRPL54Q6P161 138 aaKnown RBP2.51□□□□□ -2.01
LRRC28-205ENST00000558248 SPINT4Q6UDR6 99 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 RPS27LQ71UM5 84 aaKnown RBP2.51□□□□□ -2.01
LRRC28-205ENST00000558248 VMO1Q7Z5L0 202 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 LYPD6Q86Y78 171 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 SVBPQ8N300 66 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 Q8NAQ8 132 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 FKBP11Q9NYL4 201 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 SCP2D1Q9UJQ7 156 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 LSM2Q9Y333 95 aaKnown RBP2.51□□□□□ -2.01
LRRC28-205ENST00000558248 KIF25-AS1Q9Y6Z4 181 aa2.51□□□□□ -2.01
LRRC28-205ENST00000558248 IGHV3-64A0A075B6Q5 118 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 M0R2P5 195 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 GEMIN2O14893 280 aaKnown RBP2.5□□□□□ -2.01
LRRC28-205ENST00000558248 TRACP01848 142 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 CD3DP04234 171 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 CTSDP07339 412 aaPredicted RBP2.5□□□□□ -2.01
LRRC28-205ENST00000558248 CRYGAP11844 174 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 BRS3P32247 399 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 CKS2P33552 79 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 ETV6P41212 452 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 S100A10P60903 97 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 CIRBPQ14011 172 aaKnown RBP2.5□□□□□ -2.01
LRRC28-205ENST00000558248 ESRGQ1W209 222 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 C10orf99Q6UWK7 81 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 Q6ZQT0 140 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 SLC35E3Q7Z769 313 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 HMGN2P46Q86SG4 172 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 C4orf33Q8N1A6 199 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 TTC9CQ8N5M4 171 aa2.5□□□□□ -2.01
LRRC28-205ENST00000558248 HHLA3Q9XRX5 114 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms