RNA–Protein interactions for RNA: ENST00000557765.1

GABRB3-213, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-213ENST00000557765 ZNF664Q8N3J9 261 aa7.26□□□□□ -1.25
GABRB3-213ENST00000557765 CDC42SE2Q9NRR3 84 aa7.26□□□□□ -1.25
GABRB3-213ENST00000557765 Q9UF83 564 aa7.26□□□□□ -1.25
GABRB3-213ENST00000557765 STAB2Q8WWQ8 2551 aa7.26□□□□□ -1.25
GABRB3-213ENST00000557765 IGLV4-3A0A075B6K6 122 aa7.25□□□□□ -1.25
GABRB3-213ENST00000557765 LOC105371267A0A1B0GV96 52 aa7.25□□□□□ -1.25
GABRB3-213ENST00000557765 IGLL5B9A064 214 aa7.25□□□□□ -1.25
GABRB3-213ENST00000557765 DNAH10OSP0CZ25 163 aa7.25□□□□□ -1.25
GABRB3-213ENST00000557765 KRTDAPP60985 99 aa7.25□□□□□ -1.25
GABRB3-213ENST00000557765 S100A12P80511 92 aa7.25□□□□□ -1.25
GABRB3-213ENST00000557765 LINC01561Q8N1V8 128 aa7.25□□□□□ -1.25
GABRB3-213ENST00000557765 BAALCQ8WXS3 180 aa7.25□□□□□ -1.25
GABRB3-213ENST00000557765 CST9LQ9H4G1 147 aa7.25□□□□□ -1.25
GABRB3-213ENST00000557765 COX11Q9Y6N1 276 aa7.25□□□□□ -1.25
GABRB3-213ENST00000557765 TENM3Q9P273 2699 aa7.24□□□□□ -1.25
GABRB3-213ENST00000557765 HSBP1L1C9JCN9 74 aa7.24□□□□□ -1.25
GABRB3-213ENST00000557765 DPM2O94777 84 aa7.24□□□□□ -1.25
GABRB3-213ENST00000557765 HERVK_113P63121 156 aa7.24□□□□□ -1.25
GABRB3-213ENST00000557765 SFTA2Q6UW10 78 aa7.24□□□□□ -1.25
GABRB3-213ENST00000557765 NFE4Q86UQ8 179 aa7.24□□□□□ -1.25
GABRB3-213ENST00000557765 MUC7Q8TAX7 377 aa7.24□□□□□ -1.25
GABRB3-213ENST00000557765 TINCRA0A1B0GVN0 87 aa7.23□□□□□ -1.25
GABRB3-213ENST00000557765 TMEM262E9PQX1 116 aa7.23□□□□□ -1.25
GABRB3-213ENST00000557765 RPL39P62891 51 aaKnown RBP7.23□□□□□ -1.25
GABRB3-213ENST00000557765 ODF1Q14990 250 aa7.23□□□□□ -1.25
GABRB3-213ENST00000557765 MIAQ16674 131 aa7.23□□□□□ -1.25
GABRB3-213ENST00000557765 APLNQ9ULZ1 77 aa7.23□□□□□ -1.25
GABRB3-213ENST00000557765 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.22□□□□□ -1.25
GABRB3-213ENST00000557765 IGKV2-29A2NJV5 120 aaPredicted RBP7.22□□□□□ -1.25
GABRB3-213ENST00000557765 H3BRM9 83 aa7.22□□□□□ -1.25
GABRB3-213ENST00000557765 SIVA1O15304 175 aa7.22□□□□□ -1.25
GABRB3-213ENST00000557765 SCGB1D1O95968 90 aa7.22□□□□□ -1.25
GABRB3-213ENST00000557765 HERVK_113P61574 105 aa7.22□□□□□ -1.25
GABRB3-213ENST00000557765 RBX1P62877 108 aa7.22□□□□□ -1.25
GABRB3-213ENST00000557765 SS18Q15532 418 aa7.22□□□□□ -1.25
GABRB3-213ENST00000557765 ESRGQ1W209 222 aa7.22□□□□□ -1.25
GABRB3-213ENST00000557765 TTC32Q5I0X7 151 aa7.22□□□□□ -1.25
GABRB3-213ENST00000557765 RMI2Q96E14 147 aa7.22□□□□□ -1.25
GABRB3-213ENST00000557765 PRR34Q9NV39 138 aa7.22□□□□□ -1.25
GABRB3-213ENST00000557765 CHTOPQ9Y3Y2 248 aaKnown RBP7.22□□□□□ -1.25
GABRB3-213ENST00000557765 TRAV8-3A0A0A6YYJ7 113 aa7.21□□□□□ -1.26
GABRB3-213ENST00000557765 PRSS29PA6NIE9 313 aa7.21□□□□□ -1.26
GABRB3-213ENST00000557765 IGKCP01834 107 aa7.21□□□□□ -1.26
GABRB3-213ENST00000557765 IGLC3P0DOY3 106 aa7.21□□□□□ -1.26
GABRB3-213ENST00000557765 FBN3Q75N90 2809 aa7.2□□□□□ -1.26
GABRB3-213ENST00000557765 IGLV5-45A0A087WSX0 123 aa7.2□□□□□ -1.26
GABRB3-213ENST00000557765 C11orf86A6NJI1 115 aa7.2□□□□□ -1.26
GABRB3-213ENST00000557765 CRPP02741 224 aa7.2□□□□□ -1.26
GABRB3-213ENST00000557765 UBE2D1P51668 147 aa7.2□□□□□ -1.26
GABRB3-213ENST00000557765 GEMIN7Q9H840 131 aaKnown RBP7.2□□□□□ -1.26
GABRB3-213ENST00000557765 COL7A1Q02388 2944 aa7.19□□□□□ -1.26
GABRB3-213ENST00000557765 GAGE6Q13070 117 aa7.19□□□□□ -1.26
GABRB3-213ENST00000557765 MPV17L2Q567V2 206 aa7.19□□□□□ -1.26
GABRB3-213ENST00000557765 PYY3Q5JQD4 70 aa7.19□□□□□ -1.26
GABRB3-213ENST00000557765 F8WDY8 70 aa7.18□□□□□ -1.26
GABRB3-213ENST00000557765 ANGP03950 147 aaKnown RBP7.18□□□□□ -1.26
GABRB3-213ENST00000557765 GCSHP23434 173 aa7.18□□□□□ -1.26
GABRB3-213ENST00000557765 REG3AQ06141 175 aa7.18□□□□□ -1.26
GABRB3-213ENST00000557765 Q6ZUT4 128 aa7.18□□□□□ -1.26
GABRB3-213ENST00000557765 LINC00173Q6ZV60 143 aa7.18□□□□□ -1.26
GABRB3-213ENST00000557765 UBE2DNLQ8IWF7 75 aa7.18□□□□□ -1.26
GABRB3-213ENST00000557765 VAMP8Q9BV40 100 aa7.18□□□□□ -1.26
GABRB3-213ENST00000557765 MRPL35Q9NZE8 188 aaKnown RBP7.18□□□□□ -1.26
GABRB3-213ENST00000557765 LINC00588Q9Y4M8 146 aa7.18□□□□□ -1.26
GABRB3-213ENST00000557765 LINC00959A0A1B0GUT2 108 aa7.17□□□□□ -1.26
GABRB3-213ENST00000557765 IBA57-AS1B1ANH7 110 aa7.17□□□□□ -1.26
GABRB3-213ENST00000557765 CD164L2Q6UWJ8 174 aa7.17□□□□□ -1.26
GABRB3-213ENST00000557765 FAM104AQ969W3 186 aa7.17□□□□□ -1.26
GABRB3-213ENST00000557765 Q9H8V8 135 aa7.17□□□□□ -1.26
GABRB3-213ENST00000557765 APOMO95445 188 aa7.16□□□□□ -1.26
GABRB3-213ENST00000557765 NMUP48645 174 aa7.16□□□□□ -1.26
GABRB3-213ENST00000557765 Q8N976 141 aa7.16□□□□□ -1.26
GABRB3-213ENST00000557765 PMCHL2Q9BQD1 86 aa7.16□□□□□ -1.26
GABRB3-213ENST00000557765 CHAC1Q9BUX1 264 aa7.16□□□□□ -1.26
GABRB3-213ENST00000557765 TM2D2Q9BX73 214 aa7.16□□□□□ -1.26
GABRB3-213ENST00000557765 IGLV4-69A0A075B6H9 119 aa7.15□□□□□ -1.26
GABRB3-213ENST00000557765 IGLV4-60A0A075B6I1 120 aa7.15□□□□□ -1.26
GABRB3-213ENST00000557765 A0A087WZ39 114 aa7.15□□□□□ -1.26
GABRB3-213ENST00000557765 IGHV3OR16-9A0A0B4J2B5 98 aa7.15□□□□□ -1.26
GABRB3-213ENST00000557765 LINC00587B1AMM8 73 aa7.15□□□□□ -1.26
GABRB3-213ENST00000557765 E9PLD3 99 aa7.15□□□□□ -1.26
GABRB3-213ENST00000557765 LINC00242Q5T6M2 205 aa7.15□□□□□ -1.26
GABRB3-213ENST00000557765 BOD1L2Q8IYS8 172 aa7.15□□□□□ -1.26
GABRB3-213ENST00000557765 LINC00518Q8N0U6 118 aa7.15□□□□□ -1.26
GABRB3-213ENST00000557765 PLEKHB2Q96CS7 222 aa7.15□□□□□ -1.26
GABRB3-213ENST00000557765 H0Y8G0 127 aa7.14□□□□□ -1.27
GABRB3-213ENST00000557765 DLEU1O43261 78 aa7.14□□□□□ -1.27
GABRB3-213ENST00000557765 CXCL5P42830 114 aa7.14□□□□□ -1.27
GABRB3-213ENST00000557765 ZC2HC1BQ5TFG8 222 aa7.14□□□□□ -1.27
GABRB3-213ENST00000557765 CFAP161Q6P656 301 aa7.14□□□□□ -1.27
GABRB3-213ENST00000557765 WFDC10BQ8IUB3 73 aa7.14□□□□□ -1.27
GABRB3-213ENST00000557765 LINC00269Q8N2A0 174 aa7.14□□□□□ -1.27
GABRB3-213ENST00000557765 C12orf57Q99622 126 aa7.14□□□□□ -1.27
GABRB3-213ENST00000557765 C1orf43Q9BWL3 253 aa7.14□□□□□ -1.27
GABRB3-213ENST00000557765 HUWE1Q7Z6Z7 4374 aaKnown RBP7.13□□□□□ -1.27
GABRB3-213ENST00000557765 TRAV13-1A0A0B4J241 112 aa7.13□□□□□ -1.27
GABRB3-213ENST00000557765 TSTD3H0UI37 97 aa7.13□□□□□ -1.27
GABRB3-213ENST00000557765 CASC10Q5T4H9 136 aa7.13□□□□□ -1.27
GABRB3-213ENST00000557765 TMEM170BQ5T4T1 132 aa7.13□□□□□ -1.27
GABRB3-213ENST00000557765 KLK12Q9UKR0 248 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms