RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 ACYP1P07311 99 aa8.52□□□□□ -1.05
VIPAS39-211ENST00000557658 J3QLI3 93 aa8.52□□□□□ -1.05
VIPAS39-211ENST00000557658 DEFB136Q30KP8 78 aa8.52□□□□□ -1.05
VIPAS39-211ENST00000557658 LINC00242Q5T6M2 205 aa8.52□□□□□ -1.05
VIPAS39-211ENST00000557658 ZNF625Q96I27 306 aaPredicted RBP8.52□□□□□ -1.05
VIPAS39-211ENST00000557658 MAP6D1Q9H9H5 199 aa8.52□□□□□ -1.05
VIPAS39-211ENST00000557658 PEMTQ9UBM1 199 aa8.52□□□□□ -1.05
VIPAS39-211ENST00000557658 NCOR2Q9Y618 2525 aa8.51□□□□□ -1.05
VIPAS39-211ENST00000557658 A0A0U1RRA0 63 aa8.51□□□□□ -1.05
VIPAS39-211ENST00000557658 MAP1AP78559 2803 aaPredicted RBP8.5□□□□□ -1.05
VIPAS39-211ENST00000557658 SHISA2Q6UWI4 295 aa8.5□□□□□ -1.05
VIPAS39-211ENST00000557658 FAM19A3Q7Z5A8 133 aa8.5□□□□□ -1.05
VIPAS39-211ENST00000557658 SMIM1B2RUZ4 78 aa8.5□□□□□ -1.05
VIPAS39-211ENST00000557658 MEIG1Q5JSS6 88 aa8.5□□□□□ -1.05
VIPAS39-211ENST00000557658 C18orf65Q6ZTR6 163 aa8.5□□□□□ -1.05
VIPAS39-211ENST00000557658 PRIMA1Q86XR5 153 aa8.49□□□□□ -1.05
VIPAS39-211ENST00000557658 DYNLRB2Q8TF09 96 aa8.49□□□□□ -1.05
VIPAS39-211ENST00000557658 SOSTDC1Q6X4U4 206 aa8.49□□□□□ -1.05
VIPAS39-211ENST00000557658 Q6YL49 198 aa8.49□□□□□ -1.05
VIPAS39-211ENST00000557658 TRACP01848 142 aa8.48□□□□□ -1.05
VIPAS39-211ENST00000557658 CSDC2Q9Y534 153 aaKnown RBP8.48□□□□□ -1.05
VIPAS39-211ENST00000557658 CHD8Q9HCK8 2581 aa8.48□□□□□ -1.05
VIPAS39-211ENST00000557658 SPTBN4Q9H254 2564 aa8.48□□□□□ -1.05
VIPAS39-211ENST00000557658 CRYBG3Q68DQ2 2970 aa8.48□□□□□ -1.05
VIPAS39-211ENST00000557658 TRAV13-1A0A0B4J241 112 aa8.48□□□□□ -1.05
VIPAS39-211ENST00000557658 LINC00694P0DN24 101 aa8.48□□□□□ -1.05
VIPAS39-211ENST00000557658 HERV-K104P63124 156 aa8.48□□□□□ -1.05
VIPAS39-211ENST00000557658 Q8N2B8 174 aa8.48□□□□□ -1.05
VIPAS39-211ENST00000557658 IMUPQ9GZP8 106 aa8.48□□□□□ -1.05
VIPAS39-211ENST00000557658 RPL36AP83881 106 aaKnown RBP8.47□□□□□ -1.05
VIPAS39-211ENST00000557658 RPL36ALQ969Q0 106 aaKnown RBP8.47□□□□□ -1.05
VIPAS39-211ENST00000557658 CHCHD5Q9BSY4 110 aa8.47□□□□□ -1.05
VIPAS39-211ENST00000557658 NDUFA7O95182 113 aa8.46□□□□□ -1.05
VIPAS39-211ENST00000557658 NRGNQ92686 78 aa8.46□□□□□ -1.05
VIPAS39-211ENST00000557658 XCL2Q9UBD3 114 aa8.46□□□□□ -1.05
VIPAS39-211ENST00000557658 TRGV1A0A0A0MS02 117 aa8.46□□□□□ -1.06
VIPAS39-211ENST00000557658 TRBV10-1A0A0K0K1A3 114 aa8.46□□□□□ -1.06
VIPAS39-211ENST00000557658 BAALC-AS2P0C853 105 aa8.46□□□□□ -1.06
VIPAS39-211ENST00000557658 DAZ2Q13117 558 aaKnown RBP8.46□□□□□ -1.06
VIPAS39-211ENST00000557658 DAZ4Q86SG3 579 aaKnown RBP8.46□□□□□ -1.06
VIPAS39-211ENST00000557658 PPDPFQ9H3Y8 114 aa8.46□□□□□ -1.06
VIPAS39-211ENST00000557658 DAZ3Q9NR90 486 aaKnown RBP8.46□□□□□ -1.06
VIPAS39-211ENST00000557658 K7EQD1 137 aa8.45□□□□□ -1.06
VIPAS39-211ENST00000557658 DEFB114Q30KQ6 69 aa8.45□□□□□ -1.06
VIPAS39-211ENST00000557658 LINC00643Q86TS7 51 aa8.45□□□□□ -1.06
VIPAS39-211ENST00000557658 A0A096LNT2 108 aa8.45□□□□□ -1.06
VIPAS39-211ENST00000557658 F5H768 121 aa8.45□□□□□ -1.06
VIPAS39-211ENST00000557658 KHDC1LQ5JSQ8 128 aa8.45□□□□□ -1.06
VIPAS39-211ENST00000557658 MAPK1IP1LQ8NDC0 245 aa8.45□□□□□ -1.06
VIPAS39-211ENST00000557658 C4orf3Q8WVX3 66 aa8.45□□□□□ -1.06
VIPAS39-211ENST00000557658 CDC42SE2Q9NRR3 84 aa8.45□□□□□ -1.06
VIPAS39-211ENST00000557658 CELSR2Q9HCU4 2923 aa8.44□□□□□ -1.06
VIPAS39-211ENST00000557658 FAM236AA0A1B0GUQ0 79 aa8.44□□□□□ -1.06
VIPAS39-211ENST00000557658 FAM236BA0A1B0GV22 79 aa8.44□□□□□ -1.06
VIPAS39-211ENST00000557658 FSHBP01225 129 aa8.44□□□□□ -1.06
VIPAS39-211ENST00000557658 NTM-AS1Q6ZSK4 140 aa8.44□□□□□ -1.06
VIPAS39-211ENST00000557658 ITPR1Q14643 2758 aa8.44□□□□□ -1.06
VIPAS39-211ENST00000557658 IL17DQ8TAD2 202 aa8.44□□□□□ -1.06
VIPAS39-211ENST00000557658 PF4P02776 101 aa8.43□□□□□ -1.06
VIPAS39-211ENST00000557658 FAM222AQ5U5X8 452 aa8.43□□□□□ -1.06
VIPAS39-211ENST00000557658 TRAV13-2A0A0B4J235 113 aa8.43□□□□□ -1.06
VIPAS39-211ENST00000557658 INAFM2P0DMQ5 153 aa8.43□□□□□ -1.06
VIPAS39-211ENST00000557658 HIST2H2BCQ6DN03 193 aa8.43□□□□□ -1.06
VIPAS39-211ENST00000557658 HIST2H2BDQ6DRA6 164 aa8.43□□□□□ -1.06
VIPAS39-211ENST00000557658 STHQ8IWL8 128 aa8.43□□□□□ -1.06
VIPAS39-211ENST00000557658 C1orf158Q8N1D5 194 aa8.43□□□□□ -1.06
VIPAS39-211ENST00000557658 SMCR5Q8TEV8 140 aa8.43□□□□□ -1.06
VIPAS39-211ENST00000557658 UBE2L6O14933 153 aa8.42□□□□□ -1.06
VIPAS39-211ENST00000557658 CRPP02741 224 aa8.42□□□□□ -1.06
VIPAS39-211ENST00000557658 ODF3L2Q3SX64 289 aa8.42□□□□□ -1.06
VIPAS39-211ENST00000557658 DOPEY1Q5JWR5 2465 aa8.42□□□□□ -1.06
VIPAS39-211ENST00000557658 SMIM20Q8N5G0 67 aa8.42□□□□□ -1.06
VIPAS39-211ENST00000557658 FAM218AQ96MZ4 157 aa8.42□□□□□ -1.06
VIPAS39-211ENST00000557658 RPL28P46779 137 aaKnown RBP8.41□□□□□ -1.06
VIPAS39-211ENST00000557658 Q6ZTI0 123 aa8.41□□□□□ -1.06
VIPAS39-211ENST00000557658 FAM110AQ9BQ89 295 aa8.41□□□□□ -1.06
VIPAS39-211ENST00000557658 SDIM1Q6ZPB5 146 aa8.41□□□□□ -1.06
VIPAS39-211ENST00000557658 TMEM243Q9BU79 118 aa8.41□□□□□ -1.06
VIPAS39-211ENST00000557658 TMEM126AQ9H061 195 aa8.41□□□□□ -1.06
VIPAS39-211ENST00000557658 USP9YO00507 2555 aaPredicted RBP8.41□□□□□ -1.06
VIPAS39-211ENST00000557658 Q96MF0 132 aa8.4□□□□□ -1.06
VIPAS39-211ENST00000557658 OVOL2Q9BRP0 275 aa8.4□□□□□ -1.06
VIPAS39-211ENST00000557658 C22orf24Q9Y442 160 aa8.4□□□□□ -1.06
VIPAS39-211ENST00000557658 MALP21145 153 aa8.4□□□□□ -1.07
VIPAS39-211ENST00000557658 ANKRD17O75179 2603 aaKnown RBP8.39□□□□□ -1.07
VIPAS39-211ENST00000557658 TRAV25A0A0B4J276 109 aa8.39□□□□□ -1.07
VIPAS39-211ENST00000557658 COX7B2Q8TF08 81 aa8.39□□□□□ -1.07
VIPAS39-211ENST00000557658 ATP5G1P05496 136 aa8.39□□□□□ -1.07
VIPAS39-211ENST00000557658 IGHV4-31P0DP07 118 aa8.39□□□□□ -1.07
VIPAS39-211ENST00000557658 CXCL5P42830 114 aa8.39□□□□□ -1.07
VIPAS39-211ENST00000557658 MIR7-3HGQ8N6C7 128 aa8.39□□□□□ -1.07
VIPAS39-211ENST00000557658 GAGE2AQ6NT46 116 aa8.38□□□□□ -1.07
VIPAS39-211ENST00000557658 Q9HAA7 133 aa8.38□□□□□ -1.07
VIPAS39-211ENST00000557658 LINC00337Q8N6G1 96 aa8.38□□□□□ -1.07
VIPAS39-211ENST00000557658 SND1-IT1Q9HBX3 110 aa8.38□□□□□ -1.07
VIPAS39-211ENST00000557658 DNAL4O96015 105 aa8.37□□□□□ -1.07
VIPAS39-211ENST00000557658 NOP10Q9NPE3 64 aaKnown RBP8.37□□□□□ -1.07
VIPAS39-211ENST00000557658 TOMM7Q9P0U1 55 aa8.37□□□□□ -1.07
VIPAS39-211ENST00000557658 C5orf38Q86SI9 138 aa8.36□□□□□ -1.07
VIPAS39-211ENST00000557658 C3orf22Q8N5N4 141 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms