RNA–Protein interactions for RNA: ENST00000557539.1

MTHFD1-216, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-216ENST00000557539 PLEKHB2Q96CS7 222 aa2.44□□□□□ -2.02
MTHFD1-216ENST00000557539 BORCS8Q96FH0 119 aa2.44□□□□□ -2.02
MTHFD1-216ENST00000557539 HIST1H2BLQ99880 126 aa2.44□□□□□ -2.02
MTHFD1-216ENST00000557539 TTTY10Q9BZA0 68 aa2.44□□□□□ -2.02
MTHFD1-216ENST00000557539 TMEM133Q9H2Q1 129 aa2.44□□□□□ -2.02
MTHFD1-216ENST00000557539 LOC105371267A0A1B0GV96 52 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 A0A1W2PRE2 83 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 ODAMA1E959 279 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 FUOMA2VDF0 154 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 A6NIN4 97 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 HMSDA8MTL9 139 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 J3QLW9 94 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 J3QQQ9 107 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 DEFB4AO15263 64 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 TFF1P04155 84 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 CD2P06729 351 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 NBEAP1P0C6P0 100 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 CCL3L1P16619 93 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 NFYBP25208 207 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 AQP4P55087 323 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 LINC00311Q8N616 119 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 OR13D1Q8NGV5 346 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 DCANP1Q8TF63 244 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 ZNF714Q96N38 554 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 BATF3Q9NR55 127 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 TAS2R4Q9NYW5 299 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 HMCN1Q96RW7 5635 aa2.43□□□□□ -2.02
MTHFD1-216ENST00000557539 A0A0D9SG52 128 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 TMEM14DPA8MWL7 114 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 M0R378 163 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 TCL1BO95988 128 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 NAPSAO96009 420 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 UBBP0CG47 229 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 CRYGAP11844 174 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 ZNF93P35789 620 aaPredicted RBP2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 RPL37AP61513 92 aaKnown RBP2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 PPP3R1P63098 170 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 MT1HP80294 61 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 KRTAP5-10Q6L8G5 202 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 TMEM91Q6ZNR0 172 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 C10orf126Q8N4M7 172 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 Q8N6K4 173 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 MBD3L1Q8WWY6 194 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 DNAJC30Q96LL9 226 aa2.42□□□□□ -2.02
MTHFD1-216ENST00000557539 DEFB131BA0A096LNP1 70 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 TRGV10A0A0A0MS01 117 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 TRAV1-2A0A0B4J238 106 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 TMEM30CPA0ZSE6 113 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 MEIS3P1A6NDR6 274 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 M0QZK8 103 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 GEMIN2O14893 280 aaKnown RBP2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 DEGS1O15121 323 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 PGLYRP1O75594 196 aaPredicted RBP2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 IGKV4-1P06312 121 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 SLC38A11Q08AI6 406 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 CIRBPQ14011 172 aaKnown RBP2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 HMGN3Q15651 99 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 NDUFA5Q16718 116 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 PIGYQ3MUY2 71 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 TMEM128Q5BJH2 165 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 SAMD13Q5VXD3 122 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 LCN15Q6UWW0 184 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 NUP35Q8NFH5 326 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 MYOZ3Q8TDC0 251 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 LINC01600Q96MT4 127 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 CCDC32Q9BV29 185 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 PRO2289Q9P1D8 64 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 EPDR1Q9UM22 224 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 TPRKBQ9Y3C4 175 aa2.41□□□□□ -2.02
MTHFD1-216ENST00000557539 A0A0G2JQZ4 141 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 TRDV1A0A1B0GX56 115 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 TMEM256-PLSCR3K7ERE1 68 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 YPEL1O60688 119 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 EDDM3BP56851 147 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 INSL4Q14641 139 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 SURF2Q15527 256 aaPredicted RBP2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 HSD17B12Q53GQ0 312 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 GLIPR1L1Q6UWM5 242 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 IZUMO2Q6UXV1 221 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 ZNF833PQ6ZTB9 187 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 Q6ZTI0 123 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 YPEL2Q96QA6 119 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 CST11Q9H112 138 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 LPAR5Q9H1C0 372 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 SCN3BQ9NY72 215 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 JPT1Q9UK76 154 aa2.4□□□□□ -2.03
MTHFD1-216ENST00000557539 MEIKINA0A087WXM9 373 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 IFITM5A6NNB3 132 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 MCRIP1C9JLW8 97 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 NDUFA3O95167 84 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 TRGC2P03986 189 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 METTL15P1P0C7V9 234 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 LGALS3P17931 250 aaKnown RBP2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 BRS3P32247 399 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 RNASE4P34096 147 aaKnown RBP2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 RPS25P62851 125 aaKnown RBP2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 UBE2BP63146 152 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 KLK9Q2XQG4 91 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 MORN2Q502X0 79 aa2.39□□□□□ -2.03
MTHFD1-216ENST00000557539 C5orf56Q8N8D9 126 aa2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms