RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 LYNX1P0DP58 116 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 RPL18AQ02543 176 aaKnown RBP7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 FAM222AQ5U5X8 452 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 FAM104AQ969W3 186 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 VSIG2Q96IQ7 327 aa7.68□□□□□ -1.18
SUPT16H-207ENST00000557394 UPK3BQ9BT76 320 aa7.67□□□□□ -1.18
SUPT16H-207ENST00000557394 SPENQ96T58 3664 aaKnown RBP7.67□□□□□ -1.18
SUPT16H-207ENST00000557394 KLLNB2CW77 178 aa7.66□□□□□ -1.18
SUPT16H-207ENST00000557394 DEFB1P60022 68 aa7.66□□□□□ -1.18
SUPT16H-207ENST00000557394 PRR15Q8IV56 129 aa7.66□□□□□ -1.18
SUPT16H-207ENST00000557394 IGHV3OR16-10A0A075B7F0 116 aa7.66□□□□□ -1.18
SUPT16H-207ENST00000557394 ATP6V0E1O15342 81 aa7.66□□□□□ -1.18
SUPT16H-207ENST00000557394 NPC2P61916 151 aa7.66□□□□□ -1.18
SUPT16H-207ENST00000557394 ECSCRQ19T08 205 aa7.66□□□□□ -1.18
SUPT16H-207ENST00000557394 LINC01356Q8N9X3 169 aa7.66□□□□□ -1.18
SUPT16H-207ENST00000557394 SMG1Q96Q15 3661 aaKnown RBP7.65□□□□□ -1.18
SUPT16H-207ENST00000557394 EPG5Q9HCE0 2579 aa7.65□□□□□ -1.18
SUPT16H-207ENST00000557394 TRAV12-2A0A075B6T6 113 aa7.65□□□□□ -1.18
SUPT16H-207ENST00000557394 BBC3Q96PG8 261 aaPredicted RBP7.65□□□□□ -1.18
SUPT16H-207ENST00000557394 F6UB75 175 aa7.64□□□□□ -1.19
SUPT16H-207ENST00000557394 INAFM2P0DMQ5 153 aa7.64□□□□□ -1.19
SUPT16H-207ENST00000557394 GNLYP22749 145 aa7.64□□□□□ -1.19
SUPT16H-207ENST00000557394 FBXL19-AS1Q494R0 122 aa7.64□□□□□ -1.19
SUPT16H-207ENST00000557394 MINOS1Q5TGZ0 78 aa7.64□□□□□ -1.19
SUPT16H-207ENST00000557394 MINOS1-NBL1R4GNA1 71 aa7.64□□□□□ -1.19
SUPT16H-207ENST00000557394 PCNX1Q96RV3 2341 aa7.64□□□□□ -1.19
SUPT16H-207ENST00000557394 PRRC2AP48634 2157 aaKnown RBP7.64□□□□□ -1.19
SUPT16H-207ENST00000557394 BAALC-AS2P0C853 105 aa7.64□□□□□ -1.19
SUPT16H-207ENST00000557394 SERP2Q8N6R1 65 aa7.64□□□□□ -1.19
SUPT16H-207ENST00000557394 CD28P10747 220 aa7.63□□□□□ -1.19
SUPT16H-207ENST00000557394 NBASA2RRP1 2371 aa7.63□□□□□ -1.19
SUPT16H-207ENST00000557394 ROS1P08922 2347 aa7.63□□□□□ -1.19
SUPT16H-207ENST00000557394 ZNF843Q8N446 348 aa7.63□□□□□ -1.19
SUPT16H-207ENST00000557394 BSNQ9UPA5 3926 aa7.63□□□□□ -1.19
SUPT16H-207ENST00000557394 EPM2AB3EWF7 344 aa7.62□□□□□ -1.19
SUPT16H-207ENST00000557394 NDUFA1O15239 70 aa7.62□□□□□ -1.19
SUPT16H-207ENST00000557394 FAM74A4Q5TZK3 123 aa7.62□□□□□ -1.19
SUPT16H-207ENST00000557394 UNQ9165/PRO28630Q6UXU0 137 aa7.62□□□□□ -1.19
SUPT16H-207ENST00000557394 C11orf68Q9H3H3 251 aaKnown RBP7.62□□□□□ -1.19
SUPT16H-207ENST00000557394 SMIM26A0A096LP01 95 aa7.62□□□□□ -1.19
SUPT16H-207ENST00000557394 IGHV3-16A0A0C4DH30 117 aa7.62□□□□□ -1.19
SUPT16H-207ENST00000557394 G3V318 75 aa7.62□□□□□ -1.19
SUPT16H-207ENST00000557394 PRB1P04280 392 aa7.62□□□□□ -1.19
SUPT16H-207ENST00000557394 LINC00308Q8TCZ7 52 aa7.62□□□□□ -1.19
SUPT16H-207ENST00000557394 HIVEP3Q5T1R4 2406 aa7.61□□□□□ -1.19
SUPT16H-207ENST00000557394 PKDREJQ9NTG1 2253 aa7.61□□□□□ -1.19
SUPT16H-207ENST00000557394 ZFYVE26Q68DK2 2539 aa7.61□□□□□ -1.19
SUPT16H-207ENST00000557394 Q6JHZ5 121 aa7.61□□□□□ -1.19
SUPT16H-207ENST00000557394 KMT2BQ9UMN6 2715 aaPredicted RBP7.61□□□□□ -1.19
SUPT16H-207ENST00000557394 WNK2Q9Y3S1 2297 aa7.61□□□□□ -1.19
SUPT16H-207ENST00000557394 CFAP46Q8IYW2 2715 aa7.61□□□□□ -1.19
SUPT16H-207ENST00000557394 TRAV12-3A0A0B4J271 114 aa7.61□□□□□ -1.19
SUPT16H-207ENST00000557394 Q8N2B8 174 aa7.6□□□□□ -1.19
SUPT16H-207ENST00000557394 SERP1Q9Y6X1 66 aa7.6□□□□□ -1.19
SUPT16H-207ENST00000557394 NDUFA4O00483 81 aa7.6□□□□□ -1.19
SUPT16H-207ENST00000557394 SNRPD3P62318 126 aaKnown RBP7.6□□□□□ -1.19
SUPT16H-207ENST00000557394 LAMTOR3Q9UHA4 124 aa7.6□□□□□ -1.19
SUPT16H-207ENST00000557394 FAM223BA6NKX1 122 aa7.59□□□□□ -1.19
SUPT16H-207ENST00000557394 CIRBPQ14011 172 aaKnown RBP7.59□□□□□ -1.19
SUPT16H-207ENST00000557394 FAM223AQ8IWN6 122 aa7.59□□□□□ -1.19
SUPT16H-207ENST00000557394 FAM218AQ96MZ4 157 aa7.59□□□□□ -1.19
SUPT16H-207ENST00000557394 IGLV5-45A0A087WSX0 123 aa7.58□□□□□ -1.2
SUPT16H-207ENST00000557394 C19orf54Q5BKX5 351 aa7.58□□□□□ -1.2
SUPT16H-207ENST00000557394 LYRM9A8MSI8 78 aa7.58□□□□□ -1.2
SUPT16H-207ENST00000557394 IGHG2P01859 326 aa7.58□□□□□ -1.2
SUPT16H-207ENST00000557394 SS18Q15532 418 aa7.58□□□□□ -1.2
SUPT16H-207ENST00000557394 COPS9Q8WXC6 57 aa7.58□□□□□ -1.2
SUPT16H-207ENST00000557394 NDUFC2-KCTD14E9PQ53 114 aa7.57□□□□□ -1.2
SUPT16H-207ENST00000557394 LCE2BO14633 110 aa7.57□□□□□ -1.2
SUPT16H-207ENST00000557394 SOSTDC1Q6X4U4 206 aa7.57□□□□□ -1.2
SUPT16H-207ENST00000557394 FP248Q71RG6 208 aaPredicted RBP7.57□□□□□ -1.2
SUPT16H-207ENST00000557394 OBSCN-AS1Q96MR7 158 aa7.57□□□□□ -1.2
SUPT16H-207ENST00000557394 UBE2D4Q9Y2X8 147 aa7.57□□□□□ -1.2
SUPT16H-207ENST00000557394 X6R8D5 127 aa7.57□□□□□ -1.2
SUPT16H-207ENST00000557394 ABCA4P78363 2273 aa7.57□□□□□ -1.2
SUPT16H-207ENST00000557394 RNASE13Q5GAN3 156 aaKnown RBP7.56□□□□□ -1.2
SUPT16H-207ENST00000557394 IGLV5-39A0A0G2JS06 123 aa7.56□□□□□ -1.2
SUPT16H-207ENST00000557394 LINC01560Q8TB33 94 aa7.56□□□□□ -1.2
SUPT16H-207ENST00000557394 TM2D3Q9BRN9 247 aa7.56□□□□□ -1.2
SUPT16H-207ENST00000557394 CHCHD7Q9BUK0 85 aa7.56□□□□□ -1.2
SUPT16H-207ENST00000557394 CDKN2A-AS1Q9UH64 79 aa7.56□□□□□ -1.2
SUPT16H-207ENST00000557394 TRBV12-3P01733 135 aa7.55□□□□□ -1.2
SUPT16H-207ENST00000557394 SYNJ2BPP57105 145 aa7.55□□□□□ -1.2
SUPT16H-207ENST00000557394 FAM208BQ5VWN6 2430 aa7.55□□□□□ -1.2
SUPT16H-207ENST00000557394 ZNF462Q96JM2 2506 aa7.55□□□□□ -1.2
SUPT16H-207ENST00000557394 IGKV3D-7A0A0C4DH55 119 aa7.55□□□□□ -1.2
SUPT16H-207ENST00000557394 DNAL4O96015 105 aa7.55□□□□□ -1.2
SUPT16H-207ENST00000557394 C5orf56Q8N8D9 126 aa7.55□□□□□ -1.2
SUPT16H-207ENST00000557394 LINC00846Q9NV44 126 aa7.55□□□□□ -1.2
SUPT16H-207ENST00000557394 ANKHD1Q8IWZ3 2542 aaKnown RBP7.54□□□□□ -1.2
SUPT16H-207ENST00000557394 RPL28P46779 137 aaKnown RBP7.54□□□□□ -1.2
SUPT16H-207ENST00000557394 A0A087WVE0 104 aa7.53□□□□□ -1.2
SUPT16H-207ENST00000557394 TRBV7-6A0A0J9YX20 115 aa7.53□□□□□ -1.2
SUPT16H-207ENST00000557394 KTN1-AS1Q86SY8 53 aa7.53□□□□□ -1.2
SUPT16H-207ENST00000557394 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.53□□□□□ -1.2
SUPT16H-207ENST00000557394 OVOL2Q9BRP0 275 aa7.53□□□□□ -1.2
SUPT16H-207ENST00000557394 CSMD1Q96PZ7 3565 aa7.53□□□□□ -1.2
SUPT16H-207ENST00000557394 SPTBN1Q01082 2364 aaKnown RBP7.53□□□□□ -1.2
SUPT16H-207ENST00000557394 IGHV1OR15-1A0A075B7D0 117 aa7.53□□□□□ -1.2
SUPT16H-207ENST00000557394 FHL2Q14192 279 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms