RNA–Protein interactions for RNA: ENST00000556952.3

SIX4-203, Transcript of SIX homeobox 4, humanhuman

TSL 5

Gene SIX4, Length 1,573 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-203ENST00000556952 MRPS36P82909 103 aaKnown RBP16.36■□□□□ 0.21
SIX4-203ENST00000556952 AMMECR1LQ6DCA0 310 aa16.36■□□□□ 0.21
SIX4-203ENST00000556952 DGAT2L7PQ6IED9 249 aa16.36■□□□□ 0.21
SIX4-203ENST00000556952 CEMP1Q6PRD7 247 aaPredicted RBP16.35■□□□□ 0.21
SIX4-203ENST00000556952 GAGE6Q13070 117 aa16.34■□□□□ 0.21
SIX4-203ENST00000556952 PMVKQ15126 192 aa16.34■□□□□ 0.21
SIX4-203ENST00000556952 TMEM101Q96IK0 257 aa16.34■□□□□ 0.21
SIX4-203ENST00000556952 LYSTQ99698 3801 aa16.34■□□□□ 0.21
SIX4-203ENST00000556952 A0A087WX48 190 aa16.34■□□□□ 0.21
SIX4-203ENST00000556952 PKIAP61925 76 aa16.34■□□□□ 0.21
SIX4-203ENST00000556952 ODF1Q14990 250 aa16.34■□□□□ 0.21
SIX4-203ENST00000556952 IGLL5B9A064 214 aa16.33■□□□□ 0.2
SIX4-203ENST00000556952 OR5A1Q8NGJ0 315 aa16.33■□□□□ 0.2
SIX4-203ENST00000556952 FAM104AQ969W3 186 aa16.33■□□□□ 0.2
SIX4-203ENST00000556952 OPRPNQ99935 248 aaPredicted RBP16.33■□□□□ 0.2
SIX4-203ENST00000556952 VCX2Q9H322 139 aa16.33■□□□□ 0.2
SIX4-203ENST00000556952 Q6ZUT4 128 aa16.32■□□□□ 0.2
SIX4-203ENST00000556952 AMELXQ99217 191 aa16.32■□□□□ 0.2
SIX4-203ENST00000556952 TEX43Q6ZNM6 134 aa16.31■□□□□ 0.2
SIX4-203ENST00000556952 CST9LQ9H4G1 147 aa16.31■□□□□ 0.2
SIX4-203ENST00000556952 NUPR2A6NF83 97 aa16.3■□□□□ 0.2
SIX4-203ENST00000556952 PRSS29PA6NIE9 313 aa16.3■□□□□ 0.2
SIX4-203ENST00000556952 TRAV8-6A0A0B4J262 113 aa16.3■□□□□ 0.2
SIX4-203ENST00000556952 A0A1B0GUV1 79 aa16.3■□□□□ 0.2
SIX4-203ENST00000556952 CDC42SE2Q9NRR3 84 aa16.3■□□□□ 0.2
SIX4-203ENST00000556952 SACSQ9NZJ4 4579 aa16.29■□□□□ 0.2
SIX4-203ENST00000556952 TMEM262E9PQX1 116 aa16.29■□□□□ 0.2
SIX4-203ENST00000556952 F8VRH5 84 aa16.29■□□□□ 0.2
SIX4-203ENST00000556952 ESRGQ1W209 222 aa16.29■□□□□ 0.2
SIX4-203ENST00000556952 C2orf88Q9BSF0 95 aa16.29■□□□□ 0.2
SIX4-203ENST00000556952 CHTOPQ9Y3Y2 248 aaKnown RBP16.29■□□□□ 0.2
SIX4-203ENST00000556952 ZNF664Q8N3J9 261 aa16.28■□□□□ 0.2
SIX4-203ENST00000556952 PMCHL2Q9BQD1 86 aa16.28■□□□□ 0.2
SIX4-203ENST00000556952 ALMS1Q8TCU4 4167 aa16.27■□□□□ 0.2
SIX4-203ENST00000556952 LINC00518Q8N0U6 118 aa16.27■□□□□ 0.2
SIX4-203ENST00000556952 C12orf57Q99622 126 aa16.27■□□□□ 0.2
SIX4-203ENST00000556952 MRPL35Q9NZE8 188 aaKnown RBP16.27■□□□□ 0.2
SIX4-203ENST00000556952 DNAH1Q9P2D7 4330 aa16.26■□□□□ 0.19
SIX4-203ENST00000556952 MPV17L2Q567V2 206 aa16.26■□□□□ 0.19
SIX4-203ENST00000556952 ZC2HC1BQ5TFG8 222 aa16.26■□□□□ 0.19
SIX4-203ENST00000556952 DPM2O94777 84 aa16.26■□□□□ 0.19
SIX4-203ENST00000556952 PLNP26678 52 aa16.26■□□□□ 0.19
SIX4-203ENST00000556952 RBX1P62877 108 aa16.26■□□□□ 0.19
SIX4-203ENST00000556952 RNASE13Q5GAN3 156 aaKnown RBP16.26■□□□□ 0.19
SIX4-203ENST00000556952 KLK5Q9Y337 293 aaPredicted RBP16.26■□□□□ 0.19
SIX4-203ENST00000556952 IGLV4-60A0A075B6I1 120 aa16.25■□□□□ 0.19
SIX4-203ENST00000556952 CDPF1Q6NVV7 123 aa16.25■□□□□ 0.19
SIX4-203ENST00000556952 IGKCP01834 107 aa16.24■□□□□ 0.19
SIX4-203ENST00000556952 TCTAP57738 103 aa16.23■□□□□ 0.19
SIX4-203ENST00000556952 ATOH7Q8N100 152 aa16.23■□□□□ 0.19
SIX4-203ENST00000556952 CCL18P55774 89 aa16.22■□□□□ 0.19
SIX4-203ENST00000556952 IGLV4-69A0A075B6H9 119 aa16.21■□□□□ 0.19
SIX4-203ENST00000556952 S100A12P80511 92 aa16.21■□□□□ 0.19
SIX4-203ENST00000556952 WFDC10BQ8IUB3 73 aa16.21■□□□□ 0.18
SIX4-203ENST00000556952 APLNQ9ULZ1 77 aa16.21■□□□□ 0.18
SIX4-203ENST00000556952 MRPS16Q9Y3D3 137 aaKnown RBP16.21■□□□□ 0.18
SIX4-203ENST00000556952 IGLC3P0DOY3 106 aa16.2■□□□□ 0.18
SIX4-203ENST00000556952 UBE2D1P51668 147 aa16.2■□□□□ 0.18
SIX4-203ENST00000556952 NFE4Q86UQ8 179 aa16.2■□□□□ 0.18
SIX4-203ENST00000556952 VAMP8Q9BV40 100 aa16.2■□□□□ 0.18
SIX4-203ENST00000556952 RYR3Q15413 4870 aa16.19■□□□□ 0.18
SIX4-203ENST00000556952 LINC00588Q9Y4M8 146 aa16.19■□□□□ 0.18
SIX4-203ENST00000556952 RYR2Q92736 4967 aa16.19■□□□□ 0.18
SIX4-203ENST00000556952 TRAV9-2A0A087WT02 112 aa16.18■□□□□ 0.18
SIX4-203ENST00000556952 FAM19A3Q7Z5A8 133 aa16.17■□□□□ 0.18
SIX4-203ENST00000556952 CHAC1Q9BUX1 264 aa16.17■□□□□ 0.18
SIX4-203ENST00000556952 TINCRA0A1B0GVN0 87 aa16.17■□□□□ 0.18
SIX4-203ENST00000556952 HSBP1L1C9JCN9 74 aa16.17■□□□□ 0.18
SIX4-203ENST00000556952 ANGP03950 147 aaKnown RBP16.17■□□□□ 0.18
SIX4-203ENST00000556952 SEC11AP67812 179 aa16.17■□□□□ 0.18
SIX4-203ENST00000556952 UPK3BQ9BT76 320 aa16.17■□□□□ 0.18
SIX4-203ENST00000556952 A0A0J9YXV3 536 aa16.16■□□□□ 0.18
SIX4-203ENST00000556952 C11orf86A6NJI1 115 aa16.16■□□□□ 0.18
SIX4-203ENST00000556952 Q8N3U1 123 aa16.16■□□□□ 0.18
SIX4-203ENST00000556952 TRAV13-1A0A0B4J241 112 aa16.15■□□□□ 0.18
SIX4-203ENST00000556952 LINC01556Q5JQF7 62 aa16.15■□□□□ 0.18
SIX4-203ENST00000556952 VPS13DQ5THJ4 4388 aa16.15■□□□□ 0.18
SIX4-203ENST00000556952 HYDINQ4G0P3 5121 aa16.15■□□□□ 0.18
SIX4-203ENST00000556952 PAM16Q9Y3D7 125 aa16.14■□□□□ 0.17
SIX4-203ENST00000556952 hDV102S1A0JD36 115 aa16.13■□□□□ 0.17
SIX4-203ENST00000556952 LINC00269Q8N2A0 174 aa16.13■□□□□ 0.17
SIX4-203ENST00000556952 CCL25O15444 150 aa16.13■□□□□ 0.17
SIX4-203ENST00000556952 DNAH10OSP0CZ25 163 aa16.13■□□□□ 0.17
SIX4-203ENST00000556952 HERVK_113P63121 156 aa16.13■□□□□ 0.17
SIX4-203ENST00000556952 MAJINQ3KP22 176 aa16.13■□□□□ 0.17
SIX4-203ENST00000556952 GEMIN7Q9H840 131 aaKnown RBP16.13■□□□□ 0.17
SIX4-203ENST00000556952 LCE6AA0A183 80 aa16.12■□□□□ 0.17
SIX4-203ENST00000556952 IGHV3-30P01768 117 aa16.12■□□□□ 0.17
SIX4-203ENST00000556952 IGHV3-33P01772 117 aa16.12■□□□□ 0.17
SIX4-203ENST00000556952 IGHV3-30-3P0DP02 117 aa16.12■□□□□ 0.17
SIX4-203ENST00000556952 IGHV3-30-5P0DP03 117 aa16.12■□□□□ 0.17
SIX4-203ENST00000556952 REG3AQ06141 175 aa16.12■□□□□ 0.17
SIX4-203ENST00000556952 LINC00242Q5T6M2 205 aa16.12■□□□□ 0.17
SIX4-203ENST00000556952 IGKV3OR2-268A0A0C4DH90 116 aa16.11■□□□□ 0.17
SIX4-203ENST00000556952 LINC00959A0A1B0GUT2 108 aa16.11■□□□□ 0.17
SIX4-203ENST00000556952 SPATA45Q537H7 98 aa16.11■□□□□ 0.17
SIX4-203ENST00000556952 PRR34Q9NV39 138 aa16.11■□□□□ 0.17
SIX4-203ENST00000556952 SIVA1O15304 175 aa16.1■□□□□ 0.17
SIX4-203ENST00000556952 ZNF22P17026 224 aaPredicted RBP16.1■□□□□ 0.17
SIX4-203ENST00000556952 TMEM170BQ5T4T1 132 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms