RNA–Protein interactions for RNA: ENST00000556929.5

TMEM260-213, Transcript of transmembrane protein 260, humanhuman

TSL 4

Gene TMEM260, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-213ENST00000556929 RPL39P62891 51 aaKnown RBP6.62□□□□□ -1.35
TMEM260-213ENST00000556929 TTC32Q5I0X7 151 aa6.62□□□□□ -1.35
TMEM260-213ENST00000556929 MRPL52Q86TS9 123 aaKnown RBP6.62□□□□□ -1.35
TMEM260-213ENST00000556929 OR5A1Q8NGJ0 315 aa6.62□□□□□ -1.35
TMEM260-213ENST00000556929 TOMM6Q96B49 74 aa6.62□□□□□ -1.35
TMEM260-213ENST00000556929 TIMM21Q9BVV7 248 aa6.62□□□□□ -1.35
TMEM260-213ENST00000556929 SPANXA1Q9NS26 97 aa6.62□□□□□ -1.35
TMEM260-213ENST00000556929 UBE2D4Q9Y2X8 147 aa6.62□□□□□ -1.35
TMEM260-213ENST00000556929 CSDC2Q9Y534 153 aaKnown RBP6.62□□□□□ -1.35
TMEM260-213ENST00000556929 ANGP03950 147 aaKnown RBP6.61□□□□□ -1.35
TMEM260-213ENST00000556929 S100A6P06703 90 aa6.61□□□□□ -1.35
TMEM260-213ENST00000556929 Q8N976 141 aa6.61□□□□□ -1.35
TMEM260-213ENST00000556929 PYGO1Q9Y3Y4 419 aa6.61□□□□□ -1.35
TMEM260-213ENST00000556929 NBDYA0A0U1RRE5 68 aa6.6□□□□□ -1.35
TMEM260-213ENST00000556929 LCE6AA0A183 80 aa6.6□□□□□ -1.35
TMEM260-213ENST00000556929 CRPP02741 224 aa6.6□□□□□ -1.35
TMEM260-213ENST00000556929 NPSP0C0P6 89 aa6.6□□□□□ -1.35
TMEM260-213ENST00000556929 PMCHL1Q16048 86 aa6.6□□□□□ -1.35
TMEM260-213ENST00000556929 COA6Q5JTJ3 125 aaKnown RBP6.6□□□□□ -1.35
TMEM260-213ENST00000556929 PAPPA-AS1Q5QFB9 102 aa6.6□□□□□ -1.35
TMEM260-213ENST00000556929 ZNF664Q8N3J9 261 aa6.6□□□□□ -1.35
TMEM260-213ENST00000556929 TMEM141Q96I45 108 aa6.6□□□□□ -1.35
TMEM260-213ENST00000556929 SCGB3A1Q96QR1 104 aa6.6□□□□□ -1.35
TMEM260-213ENST00000556929 TIMM17AQ99595 171 aa6.6□□□□□ -1.35
TMEM260-213ENST00000556929 KLK12Q9UKR0 248 aa6.6□□□□□ -1.35
TMEM260-213ENST00000556929 IGLV4-60A0A075B6I1 120 aa6.59□□□□□ -1.35
TMEM260-213ENST00000556929 A0A096LNJ9 63 aa6.59□□□□□ -1.35
TMEM260-213ENST00000556929 IBA57-AS1B1ANH7 110 aa6.59□□□□□ -1.35
TMEM260-213ENST00000556929 NUPR1O60356 82 aa6.59□□□□□ -1.35
TMEM260-213ENST00000556929 LINC00310P59036 64 aa6.59□□□□□ -1.35
TMEM260-213ENST00000556929 MRPS36P82909 103 aaKnown RBP6.59□□□□□ -1.35
TMEM260-213ENST00000556929 Q6ZN92 141 aa6.59□□□□□ -1.35
TMEM260-213ENST00000556929 ERASQ7Z444 233 aa6.59□□□□□ -1.35
TMEM260-213ENST00000556929 FAM19A2Q8N3H0 131 aa6.59□□□□□ -1.35
TMEM260-213ENST00000556929 CDC42SE2Q9NRR3 84 aa6.59□□□□□ -1.35
TMEM260-213ENST00000556929 DNAH1Q9P2D7 4330 aa6.58□□□□□ -1.36
TMEM260-213ENST00000556929 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.58□□□□□ -1.36
TMEM260-213ENST00000556929 ATP5LO75964 103 aa6.58□□□□□ -1.36
TMEM260-213ENST00000556929 LEPROTL1O95214 131 aa6.58□□□□□ -1.36
TMEM260-213ENST00000556929 REG3AQ06141 175 aa6.58□□□□□ -1.36
TMEM260-213ENST00000556929 PDZD11Q5EBL8 140 aa6.58□□□□□ -1.36
TMEM260-213ENST00000556929 LINC00269Q8N2A0 174 aa6.58□□□□□ -1.36
TMEM260-213ENST00000556929 IGLV4-3A0A075B6K6 122 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 TRAV8-3A0A0A6YYJ7 113 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 IGIPA6NJ69 53 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 M0R2N4 97 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 EREGO14944 169 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 MIAQ16674 131 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 TEX43Q6ZNM6 134 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 Q6ZUT4 128 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 UBE2WQ96B02 151 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 RMI2Q96E14 147 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 VCX2Q9H322 139 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 HSPB8Q9UJY1 196 aa6.57□□□□□ -1.36
TMEM260-213ENST00000556929 TRAV8-4A0A0B4J246 113 aa6.56□□□□□ -1.36
TMEM260-213ENST00000556929 IGKV3OR2-268A0A0C4DH90 116 aa6.56□□□□□ -1.36
TMEM260-213ENST00000556929 CCL25O15444 150 aa6.56□□□□□ -1.36
TMEM260-213ENST00000556929 SS18Q15532 418 aa6.56□□□□□ -1.36
TMEM260-213ENST00000556929 CLPSL2Q6UWE3 100 aa6.56□□□□□ -1.36
TMEM260-213ENST00000556929 ENHOQ6UWT2 76 aa6.56□□□□□ -1.36
TMEM260-213ENST00000556929 NFE4Q86UQ8 179 aa6.56□□□□□ -1.36
TMEM260-213ENST00000556929 PACRGQ96M98 296 aaPredicted RBP6.56□□□□□ -1.36
TMEM260-213ENST00000556929 OPRPNQ99935 248 aaPredicted RBP6.56□□□□□ -1.36
TMEM260-213ENST00000556929 C2orf88Q9BSF0 95 aa6.56□□□□□ -1.36
TMEM260-213ENST00000556929 PRR34Q9NV39 138 aa6.56□□□□□ -1.36
TMEM260-213ENST00000556929 DNAH6Q9C0G6 4158 aa6.55□□□□□ -1.36
TMEM260-213ENST00000556929 IFITM10A6NMD0 228 aa6.55□□□□□ -1.36
TMEM260-213ENST00000556929 FABP4P15090 132 aa6.55□□□□□ -1.36
TMEM260-213ENST00000556929 S100A2P29034 98 aa6.55□□□□□ -1.36
TMEM260-213ENST00000556929 PMVKQ15126 192 aa6.55□□□□□ -1.36
TMEM260-213ENST00000556929 RNASE13Q5GAN3 156 aaKnown RBP6.55□□□□□ -1.36
TMEM260-213ENST00000556929 Q6ZR54 194 aa6.55□□□□□ -1.36
TMEM260-213ENST00000556929 BAALCQ8WXS3 180 aa6.55□□□□□ -1.36
TMEM260-213ENST00000556929 AMELXQ99217 191 aa6.55□□□□□ -1.36
TMEM260-213ENST00000556929 KRTAP1-5Q9BYS1 174 aa6.55□□□□□ -1.36
TMEM260-213ENST00000556929 Q9HAA7 133 aa6.55□□□□□ -1.36
TMEM260-213ENST00000556929 COX11Q9Y6N1 276 aa6.55□□□□□ -1.36
TMEM260-213ENST00000556929 LINC00959A0A1B0GUT2 108 aa6.54□□□□□ -1.36
TMEM260-213ENST00000556929 PRSS1P07477 247 aa6.54□□□□□ -1.36
TMEM260-213ENST00000556929 SNRPEP62304 92 aaKnown RBP6.54□□□□□ -1.36
TMEM260-213ENST00000556929 C6orf223Q8N319 242 aa6.54□□□□□ -1.36
TMEM260-213ENST00000556929 FAM104AQ969W3 186 aa6.54□□□□□ -1.36
TMEM260-213ENST00000556929 IFI27L1Q96BM0 104 aa6.54□□□□□ -1.36
TMEM260-213ENST00000556929 C1orf43Q9BWL3 253 aa6.54□□□□□ -1.36
TMEM260-213ENST00000556929 TM2D2Q9BX73 214 aa6.54□□□□□ -1.36
TMEM260-213ENST00000556929 KRTAP9-2Q9BYQ4 174 aa6.54□□□□□ -1.36
TMEM260-213ENST00000556929 SACSQ9NZJ4 4579 aa6.54□□□□□ -1.36
TMEM260-213ENST00000556929 IGKV2D-24A0A075B6R9 120 aa6.53□□□□□ -1.36
TMEM260-213ENST00000556929 TRAV13-1A0A0B4J241 112 aa6.53□□□□□ -1.36
TMEM260-213ENST00000556929 C5orf52A6NGY3 159 aa6.53□□□□□ -1.36
TMEM260-213ENST00000556929 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.53□□□□□ -1.36
TMEM260-213ENST00000556929 HIST3H2BBQ8N257 126 aa6.53□□□□□ -1.36
TMEM260-213ENST00000556929 MAP1LC3CQ9BXW4 147 aa6.53□□□□□ -1.36
TMEM260-213ENST00000556929 TMA7Q9Y2S6 64 aaKnown RBP6.53□□□□□ -1.36
TMEM260-213ENST00000556929 HYDINQ4G0P3 5121 aa6.53□□□□□ -1.36
TMEM260-213ENST00000556929 IGLV10-54A0A075B6I4 117 aa6.52□□□□□ -1.37
TMEM260-213ENST00000556929 PSCAO43653 123 aa6.52□□□□□ -1.37
TMEM260-213ENST00000556929 SEC11AP67812 179 aa6.52□□□□□ -1.37
TMEM260-213ENST00000556929 C1orf134Q5TEV5 83 aa6.52□□□□□ -1.37
TMEM260-213ENST00000556929 LINC00173Q6ZV60 143 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms