RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 A0A0J9YX75 114 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 SDHAF1A6NFY7 115 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 C11orf86A6NJI1 115 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 H7C2G1 150 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 LEPROTO15243 131 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 MRPL33O75394 65 aaKnown RBP2.3□□□□□ -2.04
PRPF39-210ENST00000556718 DNAL4O96015 105 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 PDE6HQ13956 83 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 Q5XG85 94 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 Q6JHZ5 121 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 LINC00322Q6ZN03 302 aaPredicted RBP2.3□□□□□ -2.04
PRPF39-210ENST00000556718 EXOC3-AS1Q8N2X6 119 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 TMEM263Q8WUH6 116 aaKnown RBP2.3□□□□□ -2.04
PRPF39-210ENST00000556718 BRK1Q8WUW1 75 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 TOMM6Q96B49 74 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 SLC50A1Q9BRV3 221 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 TTTY13Q9BZ97 58 aa2.3□□□□□ -2.04
PRPF39-210ENST00000556718 ATG2BQ96BY7 2078 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 TRBV19A0A075B6N1 114 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 TRAV3A0A0B4J244 114 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 A0A1B0GU33 70 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 LST1O00453 97 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 NDUFB3O43676 98 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 FXYD7P58549 80 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 HIST1H4AP62805 103 aaKnown RBP2.29□□□□□ -2.04
PRPF39-210ENST00000556718 RHOHQ15669 191 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 SPANXN1Q5VSR9 72 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 PATE2Q6UY27 113 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 SDIM1Q6ZPB5 146 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 ZNF826PQ6ZT77 177 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 MUSTN1Q8IVN3 82 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 C1orf158Q8N1D5 194 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 ZFAND2AQ8N6M9 145 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 FAM216BQ8N7L0 139 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 LINC00304Q8N9R0 145 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 C10orf105Q8TEF2 133 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 DYNLRB2Q8TF09 96 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 DSCR8Q96T75 97 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 TIMM21Q9BVV7 248 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 NDUFA4L2Q9NRX3 87 aa2.29□□□□□ -2.04
PRPF39-210ENST00000556718 KLK5Q9Y337 293 aaPredicted RBP2.29□□□□□ -2.04
PRPF39-210ENST00000556718 COL4A2P08572 1712 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 TRAV7A0A075B6U4 112 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 TRAV26-2A0A0B4J265 109 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 TRBV10-3A0A0K0K1G6 114 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 DEFB108AA8MXU0 73 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 IQCF6A8MYZ5 107 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 M0R381 172 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 TIMM17BO60830 172 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 BAALC-AS2P0C853 105 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 COX6B1P14854 86 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 ZNF22P17026 224 aaPredicted RBP2.28□□□□□ -2.04
PRPF39-210ENST00000556718 LINC00313P59037 77 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 RBM3P98179 157 aaKnown RBP2.28□□□□□ -2.04
PRPF39-210ENST00000556718 DEFB110Q30KQ9 67 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 LINC00311Q8N616 119 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 Q8NAQ8 132 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 DCANP1Q8TF63 244 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 SMIM2Q9BVW6 85 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 CNFNQ9BYD5 112 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 CCL26Q9Y258 94 aa2.28□□□□□ -2.04
PRPF39-210ENST00000556718 LY6LH3BQJ8 138 aa2.27□□□□□ -2.05
PRPF39-210ENST00000556718 IGHV3-30-3P0DP02 117 aa2.27□□□□□ -2.05
PRPF39-210ENST00000556718 DYNAPQ8N1N2 210 aa2.27□□□□□ -2.05
PRPF39-210ENST00000556718 LY6G5BQ8NDX9 201 aa2.27□□□□□ -2.05
PRPF39-210ENST00000556718 TMEM167AQ8TBQ9 72 aa2.27□□□□□ -2.05
PRPF39-210ENST00000556718 UPK3BQ9BT76 320 aa2.27□□□□□ -2.05
PRPF39-210ENST00000556718 C11orf68Q9H3H3 251 aaKnown RBP2.27□□□□□ -2.05
PRPF39-210ENST00000556718 KIAA2026Q5HYC2 2103 aa2.27□□□□□ -2.05
PRPF39-210ENST00000556718 HEATR5BQ9P2D3 2071 aa2.27□□□□□ -2.05
PRPF39-210ENST00000556718 KIAA1549LQ6ZVL6 1849 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 FREM3P0C091 2139 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 MPDZO75970 2070 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 NCOA6Q14686 2063 aaPredicted RBP2.26□□□□□ -2.05
PRPF39-210ENST00000556718 IGHV3-15A0A0B4J1V0 119 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 IGHV1-58A0A0C4DH39 117 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 TRBV7-6A0A0J9YX20 115 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 H0YGX0 51 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 I3L3M4 83 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 COX7A2LO14548 114 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 IGKV4-1P06312 121 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 XCL1P47992 114 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 MIAQ16674 131 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 RPL39P5Q59GN2 51 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.26□□□□□ -2.05
PRPF39-210ENST00000556718 SCXQ7RTU7 201 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 PRR15Q8IV56 129 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 WFDC11Q8NEX6 87 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 CCL4L1Q8NHW4 92 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 UBL5Q9BZL1 73 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 EML5Q05BV3 1969 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 CACNA1CQ13936 2221 aa2.26□□□□□ -2.05
PRPF39-210ENST00000556718 TRAV13-2A0A0B4J235 113 aa2.25□□□□□ -2.05
PRPF39-210ENST00000556718 A0A1W2PNN7 141 aa2.25□□□□□ -2.05
PRPF39-210ENST00000556718 JMJD7-PLA2G4BH0Y9G9 81 aa2.25□□□□□ -2.05
PRPF39-210ENST00000556718 UBE2L6O14933 153 aa2.25□□□□□ -2.05
PRPF39-210ENST00000556718 IGHV1-69P01742 117 aa2.25□□□□□ -2.05
PRPF39-210ENST00000556718 SAA1P0DJI8 122 aaPredicted RBP2.25□□□□□ -2.05
PRPF39-210ENST00000556718 SAA2P0DJI9 122 aaPredicted RBP2.25□□□□□ -2.05
PRPF39-210ENST00000556718 S100A4P26447 101 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms