RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 GAGE6Q13070 117 aa7.63□□□□□ -1.19
FOXN3-212ENST00000556541 PDZD11Q5EBL8 140 aa7.63□□□□□ -1.19
FOXN3-212ENST00000556541 PAPPA-AS1Q5QFB9 102 aa7.63□□□□□ -1.19
FOXN3-212ENST00000556541 AMMECR1LQ6DCA0 310 aa7.63□□□□□ -1.19
FOXN3-212ENST00000556541 Q6ZR54 194 aa7.63□□□□□ -1.19
FOXN3-212ENST00000556541 ERASQ7Z444 233 aa7.63□□□□□ -1.19
FOXN3-212ENST00000556541 TMEM141Q96I45 108 aa7.63□□□□□ -1.19
FOXN3-212ENST00000556541 TMEM101Q96IK0 257 aa7.63□□□□□ -1.19
FOXN3-212ENST00000556541 TMEM262E9PQX1 116 aa7.62□□□□□ -1.19
FOXN3-212ENST00000556541 LY6G6CO95867 125 aa7.62□□□□□ -1.19
FOXN3-212ENST00000556541 RPL39P62891 51 aaKnown RBP7.62□□□□□ -1.19
FOXN3-212ENST00000556541 OR5A1Q8NGJ0 315 aa7.62□□□□□ -1.19
FOXN3-212ENST00000556541 CDC42SE2Q9NRR3 84 aa7.62□□□□□ -1.19
FOXN3-212ENST00000556541 SACSQ9NZJ4 4579 aa7.62□□□□□ -1.19
FOXN3-212ENST00000556541 ATP5LO75964 103 aa7.61□□□□□ -1.19
FOXN3-212ENST00000556541 DGAT2L7PQ6IED9 249 aa7.61□□□□□ -1.19
FOXN3-212ENST00000556541 ZNF664Q8N3J9 261 aa7.61□□□□□ -1.19
FOXN3-212ENST00000556541 FAM104AQ969W3 186 aa7.61□□□□□ -1.19
FOXN3-212ENST00000556541 IGLV4-60A0A075B6I1 120 aa7.6□□□□□ -1.19
FOXN3-212ENST00000556541 IGLV4-3A0A075B6K6 122 aa7.6□□□□□ -1.19
FOXN3-212ENST00000556541 TRAV8-3A0A0A6YYJ7 113 aa7.6□□□□□ -1.19
FOXN3-212ENST00000556541 TRAV8-4A0A0B4J246 113 aa7.6□□□□□ -1.19
FOXN3-212ENST00000556541 MIAQ16674 131 aa7.6□□□□□ -1.19
FOXN3-212ENST00000556541 Q8N976 141 aa7.6□□□□□ -1.19
FOXN3-212ENST00000556541 DEFB104AQ8WTQ1 72 aa7.6□□□□□ -1.19
FOXN3-212ENST00000556541 AMELXQ99217 191 aa7.6□□□□□ -1.19
FOXN3-212ENST00000556541 IGHV3-30P01768 117 aa7.59□□□□□ -1.19
FOXN3-212ENST00000556541 IGHV3-33P01772 117 aa7.59□□□□□ -1.19
FOXN3-212ENST00000556541 ANGP03950 147 aaKnown RBP7.59□□□□□ -1.19
FOXN3-212ENST00000556541 IGHV3-30-3P0DP02 117 aa7.59□□□□□ -1.19
FOXN3-212ENST00000556541 IGHV3-30-5P0DP03 117 aa7.59□□□□□ -1.19
FOXN3-212ENST00000556541 Q6ZN92 141 aa7.59□□□□□ -1.19
FOXN3-212ENST00000556541 FAM19A3Q7Z5A8 133 aa7.59□□□□□ -1.19
FOXN3-212ENST00000556541 NFE4Q86UQ8 179 aa7.59□□□□□ -1.19
FOXN3-212ENST00000556541 SCGB3A1Q96QR1 104 aa7.59□□□□□ -1.19
FOXN3-212ENST00000556541 COX11Q9Y6N1 276 aa7.59□□□□□ -1.19
FOXN3-212ENST00000556541 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.58□□□□□ -1.2
FOXN3-212ENST00000556541 NUPR1O60356 82 aa7.58□□□□□ -1.2
FOXN3-212ENST00000556541 NDUFA6P56556 154 aa7.58□□□□□ -1.2
FOXN3-212ENST00000556541 REG3AQ06141 175 aa7.58□□□□□ -1.2
FOXN3-212ENST00000556541 Q8N3U1 123 aa7.58□□□□□ -1.2
FOXN3-212ENST00000556541 RMI2Q96E14 147 aa7.58□□□□□ -1.2
FOXN3-212ENST00000556541 KRTAP1-5Q9BYS1 174 aa7.58□□□□□ -1.2
FOXN3-212ENST00000556541 HSPB8Q9UJY1 196 aa7.58□□□□□ -1.2
FOXN3-212ENST00000556541 KLK12Q9UKR0 248 aa7.58□□□□□ -1.2
FOXN3-212ENST00000556541 LEPROTL1O95214 131 aa7.57□□□□□ -1.2
FOXN3-212ENST00000556541 CRPP02741 224 aa7.57□□□□□ -1.2
FOXN3-212ENST00000556541 S100A6P06703 90 aa7.57□□□□□ -1.2
FOXN3-212ENST00000556541 ENHOQ6UWT2 76 aa7.57□□□□□ -1.2
FOXN3-212ENST00000556541 TEX43Q6ZNM6 134 aa7.57□□□□□ -1.2
FOXN3-212ENST00000556541 Q6ZUT4 128 aa7.57□□□□□ -1.2
FOXN3-212ENST00000556541 LINC00269Q8N2A0 174 aa7.57□□□□□ -1.2
FOXN3-212ENST00000556541 HYDINQ4G0P3 5121 aa7.56□□□□□ -1.2
FOXN3-212ENST00000556541 TRAV12-1A0A0B4J245 112 aa7.56□□□□□ -1.2
FOXN3-212ENST00000556541 C5orf52A6NGY3 159 aa7.56□□□□□ -1.2
FOXN3-212ENST00000556541 PMVKQ15126 192 aa7.56□□□□□ -1.2
FOXN3-212ENST00000556541 PMCHL1Q16048 86 aa7.56□□□□□ -1.2
FOXN3-212ENST00000556541 LINC00173Q6ZV60 143 aa7.56□□□□□ -1.2
FOXN3-212ENST00000556541 FAM19A2Q8N3H0 131 aa7.56□□□□□ -1.2
FOXN3-212ENST00000556541 IFI27L1Q96BM0 104 aa7.56□□□□□ -1.2
FOXN3-212ENST00000556541 C2orf88Q9BSF0 95 aa7.56□□□□□ -1.2
FOXN3-212ENST00000556541 TM2D2Q9BX73 214 aa7.56□□□□□ -1.2
FOXN3-212ENST00000556541 VCX2Q9H322 139 aa7.56□□□□□ -1.2
FOXN3-212ENST00000556541 LINC00959A0A1B0GUT2 108 aa7.55□□□□□ -1.2
FOXN3-212ENST00000556541 SEC11AP67812 179 aa7.55□□□□□ -1.2
FOXN3-212ENST00000556541 SPATA12Q7Z6I5 190 aa7.55□□□□□ -1.2
FOXN3-212ENST00000556541 BAALCQ8WXS3 180 aa7.55□□□□□ -1.2
FOXN3-212ENST00000556541 UBE2WQ96B02 151 aa7.55□□□□□ -1.2
FOXN3-212ENST00000556541 KMT2AQ03164 3969 aa7.54□□□□□ -1.2
FOXN3-212ENST00000556541 UBE2D1P51668 147 aa7.54□□□□□ -1.2
FOXN3-212ENST00000556541 SS18Q15532 418 aa7.54□□□□□ -1.2
FOXN3-212ENST00000556541 Q6ZRN7 208 aaPredicted RBP7.54□□□□□ -1.2
FOXN3-212ENST00000556541 HIST3H2BBQ8N257 126 aa7.54□□□□□ -1.2
FOXN3-212ENST00000556541 C6orf223Q8N319 242 aa7.54□□□□□ -1.2
FOXN3-212ENST00000556541 CST9LQ9H4G1 147 aa7.54□□□□□ -1.2
FOXN3-212ENST00000556541 IFITM10A6NMD0 228 aa7.53□□□□□ -1.2
FOXN3-212ENST00000556541 KRTAP26-1Q6PEX3 210 aa7.53□□□□□ -1.2
FOXN3-212ENST00000556541 LINC01561Q8N1V8 128 aa7.53□□□□□ -1.2
FOXN3-212ENST00000556541 OPRPNQ99935 248 aaPredicted RBP7.53□□□□□ -1.2
FOXN3-212ENST00000556541 C1orf43Q9BWL3 253 aa7.53□□□□□ -1.2
FOXN3-212ENST00000556541 C1orf134Q5TEV5 83 aa7.52□□□□□ -1.21
FOXN3-212ENST00000556541 CD164L2Q6UWJ8 174 aa7.52□□□□□ -1.21
FOXN3-212ENST00000556541 IGLV5-45A0A087WSX0 123 aa7.51□□□□□ -1.21
FOXN3-212ENST00000556541 TINCRA0A1B0GVN0 87 aa7.51□□□□□ -1.21
FOXN3-212ENST00000556541 PRSS29PA6NIE9 313 aa7.51□□□□□ -1.21
FOXN3-212ENST00000556541 IGLC3P0DOY3 106 aa7.51□□□□□ -1.21
FOXN3-212ENST00000556541 S100A2P29034 98 aa7.51□□□□□ -1.21
FOXN3-212ENST00000556541 AKR1D1P51857 326 aa7.51□□□□□ -1.21
FOXN3-212ENST00000556541 CHCHD10Q8WYQ3 142 aaPredicted RBP7.51□□□□□ -1.21
FOXN3-212ENST00000556541 HIST1H2BLQ99880 126 aa7.51□□□□□ -1.21
FOXN3-212ENST00000556541 MAP1LC3CQ9BXW4 147 aa7.51□□□□□ -1.21
FOXN3-212ENST00000556541 TRAV13-1A0A0B4J241 112 aa7.5□□□□□ -1.21
FOXN3-212ENST00000556541 IGHV3OR16-9A0A0B4J2B5 98 aa7.5□□□□□ -1.21
FOXN3-212ENST00000556541 PRSS1P07477 247 aa7.5□□□□□ -1.21
FOXN3-212ENST00000556541 SNRPEP62304 92 aaKnown RBP7.5□□□□□ -1.21
FOXN3-212ENST00000556541 HERVK_113P63121 156 aa7.5□□□□□ -1.21
FOXN3-212ENST00000556541 RNASE13Q5GAN3 156 aaKnown RBP7.5□□□□□ -1.21
FOXN3-212ENST00000556541 LINC00242Q5T6M2 205 aa7.5□□□□□ -1.21
FOXN3-212ENST00000556541 PET117Q6UWS5 81 aa7.5□□□□□ -1.21
FOXN3-212ENST00000556541 IGKV2D-24A0A075B6R9 120 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms